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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
345.1
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
1263.6
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
1202.4
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
1029.0
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
940.7
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
935.1
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
931.7
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
869.0
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
850.8
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
813.7
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
736.1
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
702.4
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
696.9
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
677.6
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
677.5
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
659.2
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
652.1
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
645.4
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
644.3
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
644.3
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
643.9
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
633.5
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
631.4
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
626.2
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
615.5
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
611.9
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
608.2
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
604.5
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
603.6
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
601.5
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
594.1
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
590.8
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
588.6
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
586.8
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
586.2
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
580.5
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
572.4
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
570.7
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
566.5
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
563.5
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
562.6
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
560.9
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
560.0
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
557.9
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
553.2
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
552.1
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
551.1
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
549.3
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
546.5
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
543.5
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
543.2
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
539.8
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
537.6
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
535.5
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
530.8
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
530.8
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
529.6
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
523.7
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
520.3
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
520.0
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
516.2
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
515.1
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
515.0
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
505.8
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
504.5
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
498.9
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
496.0
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
494.9
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
489.1
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
487.0
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
485.9
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
479.3
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
477.9
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
477.0
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
473.9
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
471.2
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
470.2
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
467.6
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
466.8
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
466.7
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
460.9
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
460.3
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
459.7
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
456.8
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
454.1
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
452.5
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
451.8
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
451.7
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
449.6
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
448.6
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
445.5
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
441.4
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
440.7
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
434.4
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
429.6
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
425.3
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
424.8
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
424.7
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
423.2
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
421.0
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
420.9
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
416.6
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
415.0
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
413.2
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
410.0
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
409.4
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
396.1
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
389.6
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
389.6
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
388.9
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
388.2
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
387.6
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
384.3
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
382.5
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
382.0
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
380.7
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
379.8
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
379.0
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
376.8
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
376.0
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
374.0
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
372.8
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
372.8
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
369.3
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
369.0
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
368.6
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
367.5
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
367.4
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
366.4
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
366.2
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
365.8
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
365.7
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
364.7
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
364.5
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
363.4
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
362.4
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
358.8
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
358.3
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
357.4
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
356.3
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
356.2
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
356.0
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
356.0
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
355.5
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
355.4
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
353.9
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
350.3
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
350.1
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
348.3
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
348.2
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
347.3
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
347.3
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
347.2
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
346.3
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
345.2
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
345.2
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
344.4
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
343.9
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
343.1
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
341.3
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
339.6
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
339.4
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
339.3
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
338.5
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
337.3
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
336.9
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
336.7
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
336.1
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
336.0
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
335.0
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
334.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
333.5
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
331.5
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
331.2
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
327.0
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
326.2
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
326.0
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
325.5
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
324.1
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
323.6
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
322.5
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
320.3
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
320.1
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
320.1
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
320.0
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
318.2
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
317.9
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
316.4
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
315.6
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
315.1
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
315.0
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
315.0
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
314.5
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
312.8
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
312.4
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
312.0
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
311.0
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
310.8
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
310.6
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
306.2
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
305.0
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
305.0
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
304.7
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
303.2
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
300.7
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
300.5
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
299.4
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
299.3
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
299.0
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
298.8
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
297.1
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
296.3
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
295.5
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
295.3
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
294.7
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
294.5
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
293.3
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
292.3
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
291.0
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
290.6
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
290.4
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
287.8
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
286.5
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
285.3
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
285.0
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
284.0
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
283.5
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
282.9
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
282.7
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
282.0
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
281.4
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
280.0
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
279.4
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
278.7
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
278.3
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
277.7
TCGA-HQ-A2OE-01A
male, alive, 1174 days
277.4
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
277.3
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
277.1
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
276.3
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
276.3
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
275.5
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
274.1
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
273.8
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
273.3
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
272.6
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
272.3
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
271.0
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
270.2
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
269.7
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
267.1
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
267.0
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
266.9
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
266.5
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
266.3
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
265.8
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
265.4
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
265.4
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
265.0
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
264.3
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
262.7
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
262.4
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
262.1
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
260.3
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
259.9
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
258.8
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
258.6
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
257.3
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
256.2
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
254.7
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
254.6
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
254.4
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
253.6
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
253.0
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
252.3
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
252.1
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
252.0
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
251.7
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
251.4
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
250.7
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
250.5
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
250.4
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
249.7
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
249.2
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
248.0
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
247.5
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
247.3
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
246.9
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
246.9
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
246.7
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
246.0
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
245.8
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
245.3
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
245.2
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
244.8
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
244.6
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
244.3
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
244.3
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
243.5
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
243.2
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
241.4
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
241.4
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
241.1
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
241.0
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
240.5
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
240.5
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
238.5
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
238.4
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
236.8
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
236.8
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
236.1
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
235.5
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
235.1
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
234.9
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
232.6
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
232.3
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
231.8
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
231.0
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
230.8
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
230.8
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
230.5
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
229.7
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
228.6
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
228.6
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
225.9
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
224.5
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
224.4
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
223.9
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
223.6
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
222.9
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
222.3
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
221.9
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
220.0
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
218.4
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
217.4
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
217.4
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
216.0
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
209.5
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
209.0
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
208.8
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
207.8
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
206.5
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
205.5
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
204.6
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
204.1
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
204.1
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
202.0
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
201.7
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
200.7
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
200.0
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
199.3
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
199.3
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
198.8
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
198.3
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
198.2
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
196.8
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
195.8
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
195.5
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
194.3
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
193.4
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
192.3
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
191.2
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
190.6
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
190.5
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
188.8
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
188.3
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
186.6
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
185.5
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
185.5
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
183.5
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
182.5
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
180.9
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
180.8
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
180.3
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
179.7
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
177.7
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
177.2
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
176.7
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
176.2
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
175.3
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
173.2
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
173.1
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
170.5
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
168.6
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
167.8
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
166.2
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
164.7
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
164.2
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
164.0
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
163.4
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
163.0
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
162.8
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
162.1
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
161.3
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
158.9
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
156.7
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
156.7
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
153.6
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
149.8
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
148.9
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
146.6
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
143.3
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
132.6
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
120.1
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
114.9
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
112.4
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
109.5
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.