Expression of TMSB10 in pancreatic cancer

PANCREATIC CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TMSB10 is not prognostic in pancreatic cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 1723.13
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

2783.7

Number of samples

176

Samples

Sample	Description	FPKM
TCGA-FB-AAQ3-01A	65 years, female, white, stage:iib, dead, 31 days	8400.4
TCGA-HV-A7OL-01A	70 years, male, asian, stage:iia, alive, 252 days	8300.2
TCGA-HV-A7OP-01A	72 years, male, asian, stage:iib, alive, 978 days	7532.5
TCGA-OE-A75W-01A	75 years, male, white, stage:iia, dead, 267 days	7313.7
TCGA-3A-A9I5-01A	58 years, male, white, alive, 1794 days	7306.7
TCGA-FB-A5VM-01A	74 years, male, white, stage:ib, dead, 498 days	6924.9
TCGA-IB-A6UF-01A	63 years, male, white, stage:iib, alive, 666 days	6067.4
TCGA-2L-AAQL-01A	82 years, male, white, stage:iib, dead, 292 days	5896.4
TCGA-3A-A9IB-01A	69 years, female, white, stage:iib, dead, 224 days	5333.5
TCGA-2J-AAB6-01A	75 years, male, white, stage:iia, dead, 293 days	5186.9
TCGA-FB-AAQ0-01A	68 years, male, white, stage:iia, dead, 473 days	4972.0
TCGA-2L-AAQJ-01A	49 years, female, white, stage:iii, dead, 394 days	4792.9
TCGA-3A-A9IH-01A	66 years, female, white, stage:ia, alive, 1021 days	4762.9
TCGA-YH-A8SY-01A	73 years, female, white, alive, 388 days	4534.8
TCGA-XD-AAUL-01A	56 years, male, white, stage:iia, alive, 498 days	4435.0
TCGA-IB-AAUN-01A	74 years, female, white, stage:ib, dead, 144 days	4351.8
TCGA-IB-AAUO-01A	64 years, female, white, stage:iib, dead, 239 days	4319.8
TCGA-2J-AABO-01A	43 years, male, white, stage:iib, alive, 440 days	4316.2
TCGA-Q3-AA2A-01A	64 years, female, white, stage:ib, alive, 95 days	4103.4
TCGA-IB-7885-01A	78 years, female, white, stage:iib, alive, 1257 days	4045.4
TCGA-Q3-A5QY-01A	58 years, male, white, stage:iib, alive, 416 days	3971.8
TCGA-FB-AAQ2-01A	81 years, female, white, stage:iib, dead, 153 days	3970.9
TCGA-FB-AAPZ-01A	54 years, male, white, stage:iib, alive, 716 days	3965.9
TCGA-M8-A5N4-01A	48 years, female, stage:iia, alive, 584 days	3954.8
TCGA-FB-AAPY-01A	71 years, male, white, stage:iib, dead, 1059 days	3910.9
TCGA-FB-AAQ6-01A	85 years, male, white, stage:ia, dead, 244 days	3839.9
TCGA-F2-A44G-01A	79 years, female, white, stage:iib, dead, 233 days	3836.5
TCGA-3A-A9IU-01A	65 years, male, white, stage:iib, dead, 458 days	3821.7
TCGA-FB-A545-01A	72 years, female, white, stage:iib, dead, 732 days	3756.3
TCGA-3A-A9IC-01A	61 years, female, white, stage:iib, dead, 738 days	3742.0
TCGA-YY-A8LH-01A	61 years, female, white, stage:iib, alive, 2016 days	3739.5
TCGA-2J-AABI-01A	55 years, female, white, stage:iia, alive, 969 days	3737.7
TCGA-HZ-8001-01A	69 years, male, white, stage:iii, alive, 706 days	3705.4
TCGA-2L-AAQE-01A	56 years, male, white, stage:iib, dead, 684 days	3692.0
TCGA-FB-AAPS-01A	62 years, female, white, stage:iib, alive, 228 days	3679.9
TCGA-IB-7889-01A	86 years, female, white, stage:iib, dead, 481 days	3677.8
TCGA-IB-AAUU-01A	35 years, male, white, stage:iib, alive, 245 days	3616.8
TCGA-2J-AABU-01A	56 years, male, white, stage:iib, dead, 277 days	3608.2
TCGA-HV-A5A6-01A	65 years, female, asian, stage:iib, dead, 2036 days	3604.0
TCGA-PZ-A5RE-01A	44 years, female, white, stage:iib, dead, 470 days	3588.5
TCGA-IB-A7M4-01A	81 years, male, white, stage:iib, alive, 483 days	3554.6
TCGA-XN-A8T3-01A	67 years, male, white, stage:ib, alive, 951 days	3553.7
TCGA-IB-A5SS-01A	64 years, female, white, stage:iib, dead, 460 days	3524.0
TCGA-XD-AAUI-01A	50 years, female, white, stage:iib, dead, 366 days	3416.7
TCGA-IB-AAUS-01A	84 years, female, white, stage:iib, alive, 225 days	3365.8
TCGA-RB-A7B8-01A	81 years, female, white, stage:iib, dead, 466 days	3365.0
TCGA-RL-AAAS-01A	60 years, female, white, stage:ib, alive, 9 days	3352.6
TCGA-L1-A7W4-01A	48 years, female, white, stage:iib, dead, 278 days	3305.7
TCGA-2J-AAB8-01A	71 years, male, white, stage:iib, alive, 80 days	3292.2
TCGA-IB-AAUQ-01A	50 years, male, white, stage:iib, dead, 183 days	3271.3
TCGA-IB-A5ST-01A	64 years, female, white, stage:iib, alive, 635 days	3245.7
TCGA-US-A77J-01A	81 years, female, white, stage:iib, dead, 568 days	3243.7
TCGA-Z5-AAPL-01A	74 years, female, white, stage:iia, alive, 467 days	3242.5
TCGA-HZ-A77Q-01A	55 years, female, white, stage:iib, alive, 33 days	3238.3
TCGA-IB-7651-01A	64 years, female, white, stage:iib, dead, 603 days	3238.0
TCGA-US-A779-01A	54 years, female, white, stage:iib, dead, 511 days	3179.6
TCGA-LB-A8F3-01A	64 years, female, black or african american, stage:iia, alive, 379 days	3178.8
TCGA-FB-AAQ1-01A	49 years, male, white, stage:iib, dead, 123 days	3148.5
TCGA-IB-8127-01A	59 years, male, white, stage:iib, alive, 522 days	3113.1
TCGA-F2-6879-01A	57 years, male, white, stage:iib, dead, 334 days	3050.5
TCGA-2J-AABK-01A	71 years, male, white, stage:iib, alive, 484 days	3036.2
TCGA-RB-AA9M-01A	43 years, male, white, stage:iib, alive, 286 days	3035.8
TCGA-YB-A89D-01A	59 years, male, white, stage:iib, alive, 350 days	3025.9
TCGA-FB-AAPQ-01A	65 years, male, white, stage:iib, dead, 1130 days	3019.6
TCGA-FB-A78T-01A	71 years, female, white, stage:iib, dead, 375 days	3014.8
TCGA-IB-7646-01A	60 years, male, white, stage:iib, dead, 145 days	3009.5
TCGA-3A-A9I9-01A	67 years, male, white, stage:iia, dead, 634 days	3008.7
TCGA-HZ-A77O-01A	77 years, female, white, stage:iib, dead, 160 days	2997.2
TCGA-2J-AAB4-01A	48 years, male, white, stage:iib, alive, 729 days	2985.3
TCGA-IB-A7LX-01A	57 years, male, white, stage:iib, dead, 250 days	2982.8
TCGA-HZ-A9TJ-01A	70 years, male, white, stage:iv, alive, 603 days	2976.6
TCGA-2J-AABH-01A	61 years, male, white, stage:iia, alive, 1287 days	2953.4
TCGA-2J-AABP-01A	58 years, female, white, stage:iib, alive, 463 days	2907.3
TCGA-H6-8124-01A	56 years, female, white, stage:iib, alive, 392 days	2902.1
TCGA-FB-A4P5-01A	69 years, female, white, stage:iib, dead, 179 days	2879.9
TCGA-2J-AAB9-01A	71 years, female, white, stage:iib, dead, 627 days	2815.7
TCGA-F2-A7TX-01A	77 years, male, white, stage:iib, dead, 95 days	2773.9
TCGA-2J-AAB1-01A	65 years, male, white, stage:iib, dead, 66 days	2768.3
TCGA-FB-AAPP-01A	71 years, male, white, stage:iib, dead, 485 days	2741.4
TCGA-IB-A5SP-01A	77 years, male, white, stage:iia, alive, 482 days	2741.0
TCGA-2J-AABF-01A	73 years, male, white, stage:iib, dead, 691 days	2719.4
TCGA-3A-A9J0-01A	75 years, male, white, stage:iib, alive, 743 days	2709.7
TCGA-2L-AAQA-01A	76 years, male, white, stage:iib, dead, 143 days	2698.0
TCGA-HZ-8637-01A	76 years, female, white, stage:iib, dead, 517 days	2694.2
TCGA-HV-AA8V-01A	50 years, male, asian, stage:iib, alive, 920 days	2668.6
TCGA-IB-7887-01A	62 years, female, white, stage:iib, dead, 110 days	2668.5
TCGA-3E-AAAZ-01A	71 years, male, white, stage:iia, dead, 2182 days	2642.5
TCGA-F2-A8YN-01A	76 years, male, white, stage:iia, alive, 517 days	2632.7
TCGA-HZ-A8P1-01A	81 years, male, white, stage:ib, alive, 7 days	2629.8
TCGA-IB-AAUR-01A	67 years, male, white, stage:iib, alive, 338 days	2613.3
TCGA-XN-A8T5-01A	53 years, female, white, stage:ib, alive, 720 days	2577.6
TCGA-HZ-7919-01A	52 years, female, white, stage:iib, dead, 593 days	2562.4
TCGA-FB-A7DR-01A	48 years, male, asian, stage:iia, dead, 353 days	2542.9
TCGA-IB-A5SQ-01A	56 years, female, white, stage:ib, dead, 219 days	2541.0
TCGA-US-A776-01A	61 years, male, white, stage:iia, alive, 1216 days	2534.0
TCGA-2J-AABE-01A	73 years, male, white, stage:iia, alive, 676 days	2514.8
TCGA-HZ-8005-01A	81 years, male, white, stage:iib, dead, 120 days	2479.0
TCGA-HZ-7922-01A	61 years, female, white, stage:iib, alive, 4 days	2467.8
TCGA-HZ-A4BK-01A	72 years, male, white, stage:iib, alive, 657 days	2391.7
TCGA-IB-7644-01A	65 years, female, white, stage:iv, dead, 394 days	2383.1
TCGA-IB-A5SO-01A	71 years, male, white, stage:iib, dead, 365 days	2376.5
TCGA-H6-A45N-01A	88 years, female, white, stage:iib, dead, 421 days	2312.2
TCGA-3E-AAAY-01A	67 years, male, white, stage:iib, alive, 2285 days	2310.9
TCGA-S4-A8RP-01A	77 years, female, white, stage:iib, dead, 702 days	2310.7
TCGA-IB-7886-01A	80 years, male, white, stage:iib, dead, 123 days	2307.4
TCGA-US-A77E-01A	73 years, male, white, stage:iib, dead, 430 days	2305.0
TCGA-3A-A9I7-01A	45 years, male, black or african american, stage:iib, alive, 1323 days	2278.0
TCGA-IB-AAUP-01A	68 years, male, white, stage:iib, alive, 431 days	2267.2
TCGA-HZ-7289-01A	77 years, male, white, stage:iib, dead, 661 days	2265.6
TCGA-IB-7890-01A	73 years, male, stage:ib, dead, 598 days	2254.9
TCGA-US-A77G-01A	64 years, male, white, stage:iib, dead, 12 days	2252.1
TCGA-HV-AA8X-01A	75 years, female, asian, stage:iib, dead, 532 days	2234.8
TCGA-2L-AAQI-01A	66 years, male, white, stage:iib, dead, 103 days	2197.7
TCGA-HZ-7926-01A	57 years, male, black or african american, stage:iib, dead, 518 days	2187.9
TCGA-HZ-A4BH-01A	75 years, male, white, stage:iib, alive, 194 days	2181.1
TCGA-IB-AAUV-01A	49 years, male, white, stage:iib, alive, 404 days	2157.0
TCGA-IB-7649-01A	73 years, female, stage:iib, dead, 467 days	2150.5
TCGA-FB-AAPU-01A	41 years, female, asian, stage:iia, dead, 381 days	2137.9
TCGA-IB-7893-01A	64 years, male, white, stage:iia, dead, 117 days	2137.8
TCGA-2J-AABR-01A	60 years, female, white, stage:iia, alive, 438 days	2122.0
TCGA-HV-A5A5-01A	61 years, female, asian, stage:iib, alive, 289 days	2110.3
TCGA-HV-A5A3-01A	50 years, male, asian, stage:iia, dead, 128 days	2102.8
TCGA-IB-AAUT-01A	65 years, male, white, stage:iib, alive, 287 days	2075.0
TCGA-HZ-8315-01A	54 years, female, white, stage:iia, dead, 299 days	2074.3
TCGA-IB-7891-01A	49 years, female, white, stage:iib, dead, 913 days	2071.7
TCGA-IB-A6UG-01A	65 years, male, white, stage:iib, dead, 41 days	2044.5
TCGA-HZ-A49H-01A	68 years, female, white, stage:iib, alive, 491 days	2041.7
TCGA-XD-AAUG-01A	66 years, female, white, stage:iv, alive, 420 days	2017.4
TCGA-HZ-8636-01A	58 years, female, white, stage:iv, dead, 545 days	2010.3
TCGA-HZ-7925-01A	66 years, male, white, stage:iib, dead, 614 days	1989.6
TCGA-S4-A8RO-01A	75 years, female, white, stage:iib, alive, 525 days	1983.9
TCGA-H8-A6C1-01A	53 years, male, white, stage:iia, alive, 671 days	1951.9
TCGA-XD-AAUH-01A	57 years, female, white, stage:iib, alive, 395 days	1942.6
TCGA-IB-7654-01A	80 years, male, white, stage:iib, dead, 476 days	1900.2
TCGA-HZ-8002-01A	61 years, male, white, stage:iib, dead, 366 days	1880.5
TCGA-F2-7276-01A	64 years, male, white, stage:iib, dead, 216 days	1870.8
TCGA-3A-A9IZ-01A	47 years, male, white, stage:iib, dead, 308 days	1856.7
TCGA-LB-A7SX-01A	74 years, female, black or african american, stage:iib, dead, 393 days	1845.1
TCGA-IB-7645-01A	44 years, female, stage:iib, dead, 1502 days	1819.9
TCGA-US-A774-01A	76 years, female, white, stage:iib, dead, 695 days	1756.6
TCGA-HZ-A49I-01A	77 years, male, white, stage:iib, dead, 308 days	1689.7
TCGA-3A-A9IX-01A	40 years, male, white, stage:ia, alive, 1037 days	1672.9
TCGA-IB-7888-01A	66 years, female, black or african american, stage:iia, dead, 1332 days	1639.1
TCGA-HZ-7918-01A	72 years, male, white, stage:iib, alive, 969 days	1623.1
TCGA-HV-A5A4-01A	72 years, female, asian, stage:iia, alive, 232 days	1613.5
TCGA-HZ-7920-01A	71 years, male, white, stage:ib, dead, 236 days	1582.6
TCGA-HZ-A49G-01A	58 years, female, white, stage:iib, alive, 660 days	1576.4
TCGA-F2-A44H-01A	65 years, male, white, stage:iia, alive, 586 days	1537.9
TCGA-HZ-7923-01A	65 years, male, white, stage:iia, alive, 314 days	1521.4
TCGA-S4-A8RM-01A	67 years, male, white, stage:iib, alive, 737 days	1471.1
TCGA-HZ-A77P-01A	77 years, male, white, stage:iib, alive, 330 days	1444.0
TCGA-HZ-8638-01A	84 years, female, white, stage:ia, dead, 151 days	1408.7
TCGA-2J-AABA-01A	55 years, male, white, stage:iib, dead, 607 days	1397.4
TCGA-LB-A9Q5-01A	63 years, female, white, stage:iib, dead, 313 days	1392.7
TCGA-2J-AABV-01A	74 years, male, white, stage:iib, dead, 652 days	1379.1
TCGA-2J-AABT-01A	72 years, female, white, stage:iib, alive, 319 days	1370.8
TCGA-HZ-8317-01A	69 years, female, white, stage:iib, dead, 378 days	1336.3
TCGA-IB-7897-01A	54 years, female, white, stage:iib, dead, 486 days	1320.1
TCGA-F2-7273-01A	54 years, male, black or african american, stage:iib, dead, 592 days	1313.8
TCGA-FB-A4P6-01A	54 years, male, white, stage:iib, alive, 767 days	1290.0
TCGA-IB-AAUW-01A	63 years, female, white, stage:iib, dead, 230 days	1286.0
TCGA-IB-7652-01A	49 years, female, asian, stage:iib, alive, 1116 days	1246.3
TCGA-2L-AAQM-01A	52 years, male, white, stage:iib, alive, 1383 days	1197.8
TCGA-HZ-8519-01A	73 years, male, white, stage:ia, alive, 454 days	1131.1
TCGA-IB-AAUM-01A	76 years, male, white, stage:iib, alive, 8 days	871.8
TCGA-HZ-7924-01A	60 years, female, white, stage:iia, alive, 840 days	845.3
TCGA-HZ-8003-01A	65 years, female, white, stage:iib, dead, 596 days	793.6
TCGA-3A-A9IN-01A	62 years, female, white, stage:ib, alive, 2084 days	737.9
TCGA-IB-8126-01A	80 years, female, white, stage:iii, alive, 462 days	641.6
TCGA-3A-A9IV-01A	59 years, female, white, stage:ib, alive, 1103 days	615.5
TCGA-3A-A9IR-01A	64 years, female, white, stage:ib, alive, 1542 days	586.5
TCGA-3A-A9IJ-01A	65 years, male, white, stage:ib, alive, 1854 days	542.3
TCGA-3A-A9IL-01A	39 years, female, white, stage:i, alive, 2741 days	526.8
TCGA-3A-A9IO-01A	56 years, male, white, alive, 1942 days	298.5
TCGA-3A-A9IS-01A	67 years, male, white, stage:ib, alive, 998 days	257.2
TCGA-F2-6880-01A	70 years, male, white, stage:iib, alive, 289 days	237.7
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PANCREATIC CANCER - Protein expressionⁱ

Pending cancer tissue analysis