Expression of PRPF6 in urothelial cancer

UROTHELIAL CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

PRPF6 is not prognostic in urothelial cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 40.03
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

53.7

Number of samples

406

Samples

Sample	Description	FPKM
TCGA-PQ-A6FN-01A	78 years, female, white, stage:iii, alive, 507 days	113.9
TCGA-E5-A4U1-01A	72 years, male, stage:ii, alive, 1181 days	113.4
TCGA-PQ-A6FI-01A	70 years, male, white, stage:ii, alive, 372 days	105.6
TCGA-DK-AA6U-01A	64 years, male, white, stage:ii, alive, 578 days	103.5
TCGA-GC-A3BM-01A	70 years, male, white, stage:ii, dead, 651 days	99.3
TCGA-UY-A78O-01A	74 years, female, white, stage:ii, alive, 2312 days	97.2
TCGA-UY-A78N-01A	79 years, male, white, stage:iv, dead, 2641 days	94.7
TCGA-BT-A42F-01A	64 years, male, white, stage:iv, alive, 864 days	93.1
TCGA-C4-A0EZ-01A	69 years, female, stage:iv, dead, 273 days	93.0
TCGA-GD-A6C6-01A	64 years, male, white, stage:iii, alive, 67 days	92.8
TCGA-GU-AATO-01A	75 years, male, white, stage:iv, dead, 324 days	92.0
TCGA-E7-A6ME-01A	75 years, male, asian, stage:ii, alive, 731 days	89.5
TCGA-XF-AAMZ-01A	81 years, female, white, stage:iv, dead, 1348 days	88.8
TCGA-GC-A6I3-01A	90 years, female, black or african american, stage:iv, alive, 423 days	88.7
TCGA-E7-A97Q-01A	60 years, female, white, stage:iv, dead, 246 days	88.3
TCGA-ZF-AA4U-01A	70 years, male, white, stage:iii, dead, 262 days	87.9
TCGA-FD-A62O-01A	74 years, male, white, stage:iv, dead, 216 days	86.8
TCGA-FD-A43X-01A	84 years, male, white, stage:ii, alive, 110 days	85.7
TCGA-G2-A2EF-01A	50 years, male, white, stage:ii, alive, 1884 days	83.6
TCGA-XF-A9SX-01A	63 years, female, white, stage:iv, dead, 719 days	82.5
TCGA-CF-A8HY-01A	59 years, male, asian, stage:ii, alive, 345 days	82.4
TCGA-GC-A4ZW-01A	71 years, male, white, stage:iii, alive, 15 days	82.3
TCGA-FD-A6TE-01A	54 years, male, white, stage:iv, alive, 376 days	81.8
TCGA-XF-AAMX-01A	87 years, female, black or african american, stage:iii, dead, 206 days	81.6
TCGA-BT-A20J-01A	75 years, male, white, stage:ii, dead, 579 days	81.4
TCGA-C4-A0F7-01A	77 years, male, stage:iv, dead, 62 days	81.4
TCGA-DK-A3IL-01A	79 years, female, white, stage:iv, dead, 413 days	80.6
TCGA-XF-A9SY-01A	60 years, female, white, stage:iv, alive, 640 days	80.4
TCGA-CU-A0YR-01A	84 years, male, white, stage:iv, dead, 460 days	79.7
TCGA-FD-A5C1-01A	61 years, female, white, stage:iii, alive, 1792 days	79.7
TCGA-FD-A3SR-01A	68 years, male, white, stage:iv, dead, 602 days	78.3
TCGA-ZF-A9R0-01A	82 years, male, white, stage:iii, dead, 680 days	78.1
TCGA-FD-A3SS-01A	66 years, male, white, stage:iv, dead, 391 days	77.8
TCGA-FD-A43S-01A	71 years, female, white, stage:iii, alive, 455 days	77.5
TCGA-4Z-AA7M-01A	65 years, male, white, stage:iii, alive, 495 days	77.1
TCGA-CU-A0YO-01A	84 years, male, white, stage:iv, dead, 149 days	76.8
TCGA-ZF-A9R1-01A	81 years, male, white, stage:iv, alive, 773 days	76.4
TCGA-YF-AA3L-01A	47 years, female, stage:ii, alive, 364 days	76.3
TCGA-E7-A519-01A	72 years, male, white, stage:ii, alive, 508 days	76.1
TCGA-XF-AAN1-01A	75 years, female, stage:iii, dead, 941 days	75.6
TCGA-ZF-AA52-01A	70 years, male, white, stage:iii, dead, 1077 days	75.3
TCGA-DK-A3IS-01A	68 years, male, white, stage:ii, alive, 1529 days	75.2
TCGA-UY-A78M-01A	81 years, female, asian, stage:iv, dead, 690 days	75.1
TCGA-DK-A6AV-01A	82 years, female, asian, stage:ii, alive, 1952 days	74.8
TCGA-DK-AA6W-01A	79 years, male, white, stage:ii, dead, 415 days	74.6
TCGA-DK-A3X2-01A	85 years, male, white, stage:iv, dead, 547 days	73.7
TCGA-DK-A6B0-01A	61 years, male, white, stage:ii, alive, 2330 days	73.5
TCGA-DK-A3WX-01A	67 years, female, white, stage:iii, dead, 321 days	73.2
TCGA-ZF-AA54-01A	71 years, male, white, stage:iii, dead, 590 days	72.9
TCGA-G2-A2EJ-01A	56 years, female, white, stage:ii, alive, 1460 days	72.6
TCGA-XF-A8HB-01A	50 years, female, stage:ii, alive, 1370 days	72.5
TCGA-CF-A47W-01A	42 years, male, asian, stage:ii, alive, 368 days	72.5
TCGA-GC-A3OO-01A	79 years, male, white, stage:ii, alive, 481 days	72.4
TCGA-BT-A20P-01A	81 years, female, white, stage:iii, dead, 544 days	72.2
TCGA-DK-A1A6-01A	53 years, male, white, stage:iv, alive, 2020 days	71.9
TCGA-DK-AA75-01A	82 years, male, white, stage:iii, dead, 340 days	71.3
TCGA-BT-A2LD-01A	78 years, female, white, stage:iv, dead, 623 days	71.2
TCGA-FD-A5BS-01A	68 years, male, white, stage:iii, alive, 1639 days	71.1
TCGA-KQ-A41P-01A	76 years, male, white, stage:iv, alive, 1094 days	71.0
TCGA-CF-A47S-01A	41 years, male, asian, stage:ii, alive, 333 days	70.7
TCGA-UY-A78L-01A	62 years, male, white, stage:iv, alive, 1127 days	70.6
TCGA-CF-A47T-01A	58 years, female, asian, stage:ii, dead, 385 days	70.5
TCGA-DK-AA74-01A	75 years, male, white, stage:iii, alive, 1708 days	70.4
TCGA-E7-A678-01A	55 years, male, asian, stage:iii, alive, 798 days	70.2
TCGA-FD-A5BT-01A	84 years, male, white, stage:iii, dead, 328 days	70.0
TCGA-UY-A9PB-01A	49 years, male, white, stage:iii, alive, 899 days	69.4
TCGA-GU-A763-01A	72 years, male, white, stage:iii, alive, 997 days	69.3
TCGA-GU-A42Q-01A	67 years, male, white, stage:iii, dead, 344 days	69.2
TCGA-BT-A0S7-01A	75 years, male, white, stage:iii, dead, 200 days	69.0
TCGA-SY-A9G5-01A	66 years, male, white, stage:iii, alive, 1186 days	68.7
TCGA-FD-A6TF-01A	80 years, female, white, stage:iv, dead, 69 days	68.7
TCGA-DK-AA71-01A	71 years, male, white, stage:ii, alive, 415 days	68.6
TCGA-BL-A3JM-01A	63 years, male, white, stage:iii, dead, 205 days	68.5
TCGA-ZF-AA4T-01A	65 years, male, white, stage:iv, dead, 599 days	68.3
TCGA-FD-A3B6-01A	75 years, male, white, stage:ii, dead, 1005 days	68.2
TCGA-FD-A43U-01A	70 years, male, white, stage:iv, alive, 636 days	68.1
TCGA-GU-A766-01A	62 years, male, white, stage:ii, alive, 480 days	67.8
TCGA-XF-A9ST-01A	68 years, male, white, stage:iii, dead, 128 days	67.6
TCGA-XF-AAML-01A	75 years, male, white, stage:ii, dead, 232 days	67.3
TCGA-XF-A9SM-01A	76 years, male, white, stage:iii, alive, 1048 days	67.0
TCGA-GD-A3OS-01A	54 years, female, white, stage:ii, alive, 638 days	66.9
TCGA-G2-AA3C-01A	66 years, male, white, stage:iv, dead, 211 days	66.8
TCGA-GV-A3JX-01A	59 years, male, white, stage:iii, alive, 581 days	66.6
TCGA-HQ-A2OE-01A	male, alive, 1174 days	66.4
TCGA-ZF-A9RD-01A	75 years, female, white, stage:iv, dead, 408 days	65.9
TCGA-E7-A6MF-01A	37 years, male, asian, stage:ii, alive, 750 days	65.8
TCGA-H4-A2HQ-01A	64 years, female, black or african american, stage:iv, alive, 590 days	65.8
TCGA-ZF-AA5N-01A	62 years, female, white, stage:iv, dead, 168 days	65.4
TCGA-ZF-A9RN-01A	67 years, female, white, stage:iii, dead, 615 days	65.2
TCGA-YC-A9TC-01A	72 years, male, white, stage:iv, dead, 20 days	65.1
TCGA-KQ-A41O-01A	84 years, male, stage:iv, alive, 1538 days	64.9
TCGA-XF-A9SP-01A	59 years, male, white, stage:iii, dead, 454 days	64.9
TCGA-E5-A4TZ-01A	64 years, male, white, stage:iv, dead, 467 days	64.9
TCGA-C4-A0F0-01A	60 years, male, stage:ii, alive, 59 days	64.7
TCGA-CF-A27C-01A	52 years, male, asian, stage:iii, alive, 425 days	64.6
TCGA-FD-A3SQ-01A	62 years, male, white, stage:iv, dead, 1423 days	64.6
TCGA-G2-A2EL-01A	77 years, male, white, stage:ii, dead, 819 days	64.4
TCGA-XF-A9SU-01A	74 years, female, white, stage:iv, dead, 182 days	64.4
TCGA-GC-A3I6-01A	45 years, male, white, stage:iii, dead, 630 days	64.2
TCGA-UY-A78P-01A	78 years, female, white, stage:ii, alive, 2380 days	64.0
TCGA-G2-AA3D-01A	60 years, male, white, stage:iv, alive, 2139 days	64.0
TCGA-2F-A9KW-01A	67 years, female, white, stage:iii, dead, 254 days	63.7
TCGA-CU-A0YN-01A	60 years, male, white, stage:iii, dead, 393 days	63.7
TCGA-K4-A5RI-01A	67 years, female, white, stage:iii, dead, 356 days	63.3
TCGA-CF-A1HS-01A	75 years, female, asian, stage:iii, alive, 382 days	63.0
TCGA-BT-A2LB-01A	73 years, female, white, stage:iii, dead, 492 days	62.8
TCGA-YC-A89H-01A	78 years, female, white, stage:ii, alive, 573 days	62.6
TCGA-XF-A9T5-01A	78 years, female, white, stage:iv, alive, 2027 days	62.4
TCGA-4Z-AA89-01A	61 years, male, white, stage:iv, alive, 902 days	62.3
TCGA-G2-A2EC-01A	58 years, female, black or african american, stage:ii, dead, 696 days	62.2
TCGA-GV-A3QH-01A	67 years, male, white, stage:ii, dead, 258 days	62.2
TCGA-GC-A3RB-01A	54 years, male, white, stage:iii, alive, 582 days	62.1
TCGA-FD-A3B3-01A	74 years, female, white, stage:iii, dead, 974 days	62.1
TCGA-XF-AAMH-01A	80 years, male, white, stage:iv, dead, 344 days	61.6
TCGA-UY-A78K-01A	60 years, male, white, stage:iv, dead, 536 days	61.6
TCGA-FJ-A871-01A	49 years, male, white, stage:iii, dead, 272 days	61.4
TCGA-XF-AAMQ-01A	59 years, female, white, stage:ii, alive, 2177 days	61.1
TCGA-XF-A9T4-01A	48 years, male, white, stage:iv, dead, 495 days	61.0
TCGA-BT-A20Q-01A	73 years, male, white, stage:iv, dead, 593 days	61.0
TCGA-C4-A0F6-01A	82 years, female, stage:iii, alive, 700 days	60.9
TCGA-E7-A4IJ-01A	56 years, male, asian, stage:ii, dead, 674 days	60.8
TCGA-DK-AA6X-01A	63 years, male, white, stage:ii, alive, 467 days	60.8
TCGA-GD-A76B-01A	86 years, female, white, stage:ii, dead, 224 days	60.7
TCGA-2F-A9KO-01A	63 years, male, white, stage:iv, dead, 734 days	60.6
TCGA-FD-A6TC-01A	79 years, female, white, stage:iii, alive, 187 days	60.4
TCGA-5N-A9KM-01A	73 years, female, white, stage:iii, dead, 530 days	60.4
TCGA-K4-A4AC-01A	83 years, male, white, stage:ii, dead, 278 days	60.3
TCGA-4Z-AA7S-01A	66 years, male, black or african american, stage:iii, dead, 1064 days	60.2
TCGA-E7-A5KF-01A	67 years, male, asian, stage:ii, alive, 20 days	60.1
TCGA-CF-A3MG-01A	48 years, male, asian, stage:ii, alive, 369 days	59.9
TCGA-DK-A2I2-01A	63 years, female, white, stage:iv, dead, 237 days	59.9
TCGA-ZF-AA58-01A	61 years, female, white, stage:iv, alive, 1649 days	59.8
TCGA-XF-A9SI-01A	73 years, female, asian, stage:ii, alive, 2423 days	59.7
TCGA-FD-A6TH-01A	63 years, male, white, stage:iv, dead, 131 days	59.6
TCGA-HQ-A2OF-01A	52 years, female, stage:iii, alive, 1947 days	59.5
TCGA-BT-A20W-01A	71 years, male, white, stage:ii, dead, 254 days	59.5
TCGA-CF-A5U8-01A	59 years, male, asian, stage:ii, alive, 399 days	59.1
TCGA-XF-A9T0-01A	69 years, male, white, stage:iii, alive, 799 days	59.1
TCGA-XF-A8HF-01A	80 years, male, white, stage:iii, dead, 2954 days	58.9
TCGA-K4-A5RJ-01A	75 years, male, white, stage:ii, alive, 539 days	58.9
TCGA-CF-A1HR-01A	62 years, male, asian, stage:iii, alive, 389 days	58.6
TCGA-FD-A5BZ-01A	77 years, female, white, stage:iv, dead, 835 days	58.5
TCGA-4Z-AA83-01A	52 years, male, white, stage:ii, alive, 2024 days	58.5
TCGA-CF-A5UA-01A	67 years, male, asian, stage:ii, alive, 365 days	58.4
TCGA-ZF-A9RC-01A	77 years, male, white, stage:iii, alive, 2868 days	58.4
TCGA-FD-A6TK-01A	60 years, male, white, stage:iii, alive, 330 days	58.2
TCGA-DK-A3IU-01A	58 years, male, white, stage:ii, dead, 706 days	58.1
TCGA-ZF-A9R4-01A	83 years, male, white, stage:ii, alive, 921 days	57.9
TCGA-ZF-A9R3-01A	53 years, female, white, stage:ii, dead, 949 days	57.7
TCGA-S5-A6DX-01A	83 years, male, white, stage:iv, dead, 56 days	57.6
TCGA-FD-A3B7-01A	66 years, male, black or african american, stage:iii, dead, 122 days	57.5
TCGA-ZF-A9R7-01A	76 years, female, white, stage:ii, alive, 665 days	57.5
TCGA-K4-AAQO-01A	56 years, male, white, stage:iii, alive, 359 days	57.1
TCGA-DK-AA6L-01A	48 years, male, white, stage:iv, dead, 1163 days	57.1
TCGA-G2-A2EK-01A	57 years, male, white, stage:ii, alive, 485 days	57.0
TCGA-CU-A72E-01A	76 years, male, white, stage:iv, dead, 413 days	56.8
TCGA-XF-A9SV-01A	82 years, male, white, stage:iv, dead, 388 days	56.8
TCGA-UY-A9PH-01A	73 years, male, white, stage:ii, alive, 1561 days	56.8
TCGA-DK-A1AA-01A	57 years, male, white, stage:iii, alive, 578 days	56.7
TCGA-FT-A61P-01A	76 years, male, white, stage:iv, alive, 337 days	56.3
TCGA-GU-A764-01A	66 years, male, white, stage:ii, alive, 610 days	56.3
TCGA-XF-AAME-01A	64 years, female, white, stage:ii, dead, 2828 days	56.3
TCGA-E7-A85H-01A	64 years, male, asian, stage:iii, alive, 394 days	56.2
TCGA-FD-A3SO-01A	68 years, male, white, stage:iv, dead, 168 days	55.8
TCGA-UY-A8OB-01A	64 years, male, white, stage:iv, alive, 2109 days	55.7
TCGA-R3-A69X-01A	70 years, male, white, stage:iii, alive, 433 days	55.5
TCGA-BT-A20T-01A	63 years, male, white, stage:iv, dead, 453 days	55.5
TCGA-DK-A1A3-01A	60 years, male, white, stage:iv, dead, 665 days	55.4
TCGA-DK-A1AC-01A	72 years, male, white, stage:iii, alive, 3981 days	55.4
TCGA-FD-A5BX-01A	82 years, male, white, stage:iv, dead, 173 days	55.2
TCGA-SY-A9G0-01A	82 years, male, white, stage:iv, dead, 1008 days	55.2
TCGA-FT-A3EE-01A	80 years, female, white, stage:iii, dead, 99 days	55.1
TCGA-ZF-AA4X-01A	56 years, male, white, stage:ii, alive, 2044 days	54.8
TCGA-BT-A42C-01A	64 years, male, white, stage:ii, alive, 873 days	54.8
TCGA-GD-A3OP-01A	84 years, female, white, stage:iv, alive, 64 days	54.7
TCGA-E7-A3X6-01A	70 years, male, white, stage:ii, dead, 904 days	54.6
TCGA-FD-A62S-01A	60 years, female, black or african american, stage:iii, dead, 406 days	54.5
TCGA-DK-A3WY-01A	67 years, female, white, stage:iii, alive, 4967 days	54.3
TCGA-E7-A7DV-01A	44 years, male, white, stage:iv, alive, 37 days	54.3
TCGA-G2-A3VY-01A	66 years, male, asian, stage:ii, alive, 536 days	54.3
TCGA-DK-A3IT-01A	62 years, male, white, stage:iii, alive, 648 days	54.2
TCGA-2F-A9KP-01A	66 years, male, white, stage:iv, dead, 364 days	54.2
TCGA-DK-A2I4-01A	79 years, male, white, stage:iii, alive, 4343 days	54.1
TCGA-FD-A5BR-01A	57 years, male, white, stage:ii, alive, 813 days	53.9
TCGA-DK-AA6R-01A	69 years, male, white, stage:iv, alive, 5041 days	53.7
TCGA-E7-A7DU-01A	73 years, male, white, stage:iii, alive, 28 days	53.4
TCGA-FD-A6TG-01A	73 years, male, white, stage:iv, dead, 93 days	53.4
TCGA-FD-A6TA-01A	58 years, male, white, stage:iv, alive, 1912 days	53.3
TCGA-4Z-AA81-01A	80 years, male, white, stage:ii, dead, 1270 days	53.3
TCGA-GD-A2C5-01A	53 years, female, white, stage:iv, alive, 812 days	53.2
TCGA-BT-A2LA-01A	54 years, male, white, stage:iii, alive, 522 days	53.1
TCGA-XF-A8HI-01A	57 years, female, white, stage:iv, dead, 544 days	53.0
TCGA-DK-AA6T-01A	63 years, male, white, stage:ii, alive, 572 days	52.9
TCGA-FD-A3NA-01A	60 years, male, white, stage:ii, alive, 1845 days	52.9
TCGA-ZF-A9RF-01A	74 years, male, white, stage:ii, alive, 1949 days	52.8
TCGA-4Z-AA7N-01A	66 years, male, white, stage:iii, dead, 1367 days	52.6
TCGA-DK-A3IN-01A	72 years, male, white, stage:iii, dead, 250 days	52.4
TCGA-CF-A3MH-01A	75 years, male, asian, stage:ii, alive, 398 days	52.2
TCGA-XF-A9SK-01A	65 years, male, white, stage:iv, dead, 486 days	52.2
TCGA-DK-A3IV-01A	60 years, male, white, stage:ii, dead, 294 days	52.0
TCGA-XF-AAN2-01A	73 years, male, white, stage:ii, dead, 1869 days	51.9
TCGA-YF-AA3M-01A	57 years, male, stage:ii, alive, 415 days	51.8
TCGA-FD-A6TD-01A	77 years, male, white, stage:iii, dead, 386 days	51.5
TCGA-UY-A8OC-01A	90 years, male, white, stage:iv, dead, 92 days	51.5
TCGA-GV-A3QF-01A	79 years, male, white, stage:iv, dead, 617 days	51.4
TCGA-GU-A762-01A	87 years, male, white, stage:iv, dead, 232 days	51.3
TCGA-ZF-AA4W-01A	56 years, male, white, stage:iii, alive, 1830 days	51.2
TCGA-XF-A8HD-01A	77 years, male, white, stage:iii, alive, 2964 days	51.0
TCGA-LT-A8JT-01A	69 years, female, white, stage:ii, alive, 641 days	50.7
TCGA-GU-AATQ-01A	69 years, male, white, stage:iii, dead, 213 days	50.7
TCGA-FD-A62P-01A	76 years, male, white, stage:ii, dead, 191 days	50.6
TCGA-FD-A3SM-01A	70 years, male, white, stage:iv, dead, 547 days	50.6
TCGA-FD-A5C0-01A	61 years, male, white, stage:iv, dead, 550 days	50.5
TCGA-DK-A6B1-01A	67 years, male, white, stage:ii, alive, 2049 days	50.4
TCGA-DK-A1AG-01A	66 years, male, white, stage:iii, alive, 475 days	50.4
TCGA-BL-A13I-01A	57 years, female, white, stage:iii, dead, 223 days	50.1
TCGA-K4-A4AB-01B	76 years, male, white, stage:iii, alive, 84 days	50.1
TCGA-FD-A6TB-01A	82 years, male, white, stage:iii, alive, 572 days	50.1
TCGA-FD-A5BY-01A	63 years, female, white, stage:iii, alive, 251 days	50.1
TCGA-GU-AATP-01A	74 years, male, white, stage:iv, alive, 1003 days	49.8
TCGA-K4-A3WU-01B	88 years, male, white, stage:iii, alive, 105 days	49.7
TCGA-XF-A9T3-01A	69 years, female, white, stage:iv, alive, 68 days	49.7
TCGA-XF-AAMT-01A	75 years, female, white, stage:iv, dead, 90 days	49.7
TCGA-G2-A2EO-01A	69 years, male, white, stage:iii, dead, 1804 days	49.7
TCGA-ZF-A9R2-01A	75 years, male, white, stage:ii, alive, 642 days	49.6
TCGA-DK-A6B2-01A	70 years, male, white, stage:iv, alive, 477 days	49.6
TCGA-CF-A9FM-01A	50 years, male, asian, stage:i, alive, 398 days	49.6
TCGA-GU-A767-01A	81 years, male, white, stage:iv, dead, 144 days	49.4
TCGA-XF-AAN7-01A	60 years, male, white, stage:iv, dead, 565 days	49.4
TCGA-4Z-AA7R-01A	73 years, male, black or african american, stage:iv, dead, 522 days	49.3
TCGA-ZF-AA4N-01A	74 years, male, white, stage:ii, dead, 88 days	49.2
TCGA-4Z-AA80-01A	73 years, male, white, stage:ii, dead, 19 days	49.1
TCGA-4Z-AA7W-01A	55 years, male, white, stage:ii, alive, 840 days	49.1
TCGA-GU-A42R-01A	68 years, male, white, stage:iv, dead, 577 days	48.9
TCGA-ZF-A9R5-01A	59 years, male, white, stage:iii, alive, 1090 days	48.8
TCGA-XF-A9SZ-01A	79 years, male, white, stage:iv, dead, 859 days	48.7
TCGA-DK-A3IM-01A	77 years, male, white, stage:iii, dead, 248 days	48.6
TCGA-XF-A9T2-01A	54 years, male, white, stage:iii, dead, 575 days	48.6
TCGA-CF-A47X-01A	60 years, male, asian, stage:ii, alive, 384 days	48.6
TCGA-G2-A3IB-01A	66 years, male, black or african american, stage:ii, dead, 220 days	48.6
TCGA-DK-A6B6-01A	57 years, male, white, stage:ii, alive, 1115 days	48.4
TCGA-DK-A6AW-01A	70 years, male, white, stage:ii, alive, 1621 days	48.4
TCGA-XF-AAMR-01A	48 years, male, white, stage:iii, alive, 2790 days	48.4
TCGA-GV-A40G-01A	77 years, male, white, stage:ii, alive, 580 days	48.3
TCGA-BT-A20U-01A	70 years, female, white, stage:iii, dead, 455 days	48.2
TCGA-FD-A3SJ-01A	59 years, male, white, stage:iv, dead, 739 days	48.2
TCGA-XF-AAMY-01A	78 years, male, white, stage:iii, alive, 3011 days	48.0
TCGA-CF-A7I0-01A	54 years, male, asian, stage:ii, alive, 368 days	48.0
TCGA-ZF-AA5P-01A	65 years, male, white, stage:iv, alive, 372 days	47.7
TCGA-UY-A9PE-01A	87 years, male, white, stage:iv, alive, 189 days	47.6
TCGA-GV-A40E-01A	75 years, male, white, stage:ii, dead, 261 days	47.6
TCGA-BT-A3PH-01A	76 years, male, white, stage:iv, dead, 142 days	47.5
TCGA-ZF-AA5H-01A	60 years, female, white, stage:iv, alive, 897 days	47.5
TCGA-ZF-A9RM-01A	70 years, male, white, stage:ii, alive, 1455 days	47.5
TCGA-XF-A9SJ-01A	83 years, male, white, stage:iv, dead, 98 days	47.4
TCGA-E7-A8O8-01A	59 years, male, asian, stage:ii, alive, 13 days	47.3
TCGA-FJ-A3ZE-01A	65 years, male, white, stage:iv, dead, 324 days	47.1
TCGA-GC-A3YS-01A	61 years, male, white, stage:iv, alive, 758 days	47.0
TCGA-KQ-A41S-01A	87 years, female, white, stage:iii, alive, 35 days	47.0
TCGA-GU-A42P-01A	72 years, male, white, stage:iv, dead, 332 days	46.9
TCGA-E7-A7XN-01A	67 years, male, asian, stage:iii, alive, 428 days	46.9
TCGA-E7-A7PW-01A	63 years, male, asian, stage:iii, alive, 416 days	46.8
TCGA-XF-A9SL-01A	69 years, male, white, stage:iv, dead, 2020 days	46.6
TCGA-GC-A3RD-01A	83 years, female, white, stage:iii, alive, 428 days	46.3
TCGA-DK-A1A5-01A	79 years, male, white, stage:ii, dead, 65 days	46.1
TCGA-E7-A97P-01A	73 years, male, asian, stage:ii, dead, 437 days	46.1
TCGA-E7-A8O7-01A	52 years, male, asian, stage:ii, alive, 466 days	46.1
TCGA-E7-A3Y1-01A	57 years, male, white, stage:ii, alive, 163 days	46.0
TCGA-CU-A5W6-01A	70 years, male, white, stage:iii, dead, 56 days	45.8
TCGA-4Z-AA86-01A	67 years, male, black or african american, stage:iv, dead, 311 days	45.8
TCGA-S5-AA26-01A	46 years, male, black or african american, stage:iii, alive, 503 days	45.6
TCGA-ZF-A9R9-01A	58 years, male, white, stage:iv, dead, 864 days	45.6
TCGA-FD-A3SP-01A	60 years, male, white, stage:iii, alive, 783 days	45.5
TCGA-FD-A3B5-01A	86 years, male, black or african american, stage:iv, dead, 272 days	45.5
TCGA-XF-A9SH-01A	65 years, female, asian, stage:ii, dead, 1971 days	45.1
TCGA-XF-AAN0-01A	68 years, male, white, stage:iv, dead, 1718 days	45.1
TCGA-E5-A2PC-01A	61 years, female, white, stage:iv, alive, 1326 days	44.7
TCGA-DK-A2HX-01A	80 years, female, white, stage:iv, dead, 1420 days	44.7
TCGA-CF-A8HX-01A	55 years, female, asian, stage:ii, alive, 345 days	44.4
TCGA-K4-A83P-01A	77 years, male, white, stage:iv, alive, 495 days	44.2
TCGA-4Z-AA7Y-01A	60 years, male, white, stage:ii, alive, 1522 days	44.0
TCGA-XF-AAN3-01A	76 years, male, white, stage:iv, alive, 2625 days	44.0
TCGA-BT-A20O-01A	75 years, male, white, stage:iii, dead, 370 days	43.9
TCGA-DK-AA77-01A	61 years, male, white, stage:ii, alive, 618 days	43.6
TCGA-XF-A9SW-01A	85 years, male, white, stage:iv, dead, 362 days	43.5
TCGA-CF-A47V-01A	52 years, male, asian, stage:ii, alive, 379 days	43.3
TCGA-XF-A8HE-01A	47 years, male, white, stage:iii, alive, 3817 days	43.1
TCGA-E7-A5KE-01A	78 years, female, asian, stage:ii, alive, 17 days	43.1
TCGA-BT-A3PK-01A	80 years, male, white, stage:ii, dead, 303 days	43.0
TCGA-BT-A20V-01A	59 years, female, black or african american, stage:iv, dead, 154 days	42.6
TCGA-FD-A62N-01A	69 years, male, asian, stage:iii, alive, 82 days	42.6
TCGA-G2-A3IE-01A	52 years, male, white, stage:ii, dead, 612 days	42.6
TCGA-GC-A6I1-01A	90 years, female, white, stage:ii, dead, 272 days	42.6
TCGA-UY-A8OD-01A	67 years, female, black or african american, stage:ii, alive, 3432 days	42.6
TCGA-BT-A20X-01A	56 years, male, white, stage:iv, dead, 251 days	42.5
TCGA-E7-A4XJ-01A	66 years, male, asian, stage:ii, dead, 68 days	42.4
TCGA-4Z-AA7O-01A	64 years, male, black or african american, stage:ii, alive, 512 days	42.4
TCGA-KQ-A41N-01A	73 years, male, black or african american, stage:iii, alive, 1604 days	42.0
TCGA-GD-A3OQ-01A	48 years, male, white, stage:iv, alive, 95 days	41.8
TCGA-E7-A677-01A	81 years, male, asian, stage:ii, alive, 820 days	41.8
TCGA-4Z-AA7Q-01A	79 years, male, white, stage:iii, dead, 510 days	41.7
TCGA-HQ-A5ND-01A	78 years, male, stage:iv, dead, 274 days	41.5
TCGA-XF-A8HH-01A	61 years, female, white, stage:iv, dead, 57 days	41.5
TCGA-CU-A3QU-01A	58 years, male, white, stage:iv, alive, 158 days	41.5
TCGA-FD-A43P-01A	74 years, male, black or african american, stage:ii, alive, 832 days	41.4
TCGA-UY-A9PA-01A	48 years, male, white, stage:iii, alive, 119 days	41.3
TCGA-UY-A9PD-01A	81 years, male, white, stage:iii, alive, 542 days	41.2
TCGA-CF-A47Y-01A	55 years, male, asian, stage:ii, alive, 373 days	41.2
TCGA-K4-A5RH-01A	69 years, male, white, stage:iii, alive, 276 days	41.2
TCGA-ZF-AA56-01A	79 years, female, white, stage:iii, dead, 259 days	41.2
TCGA-4Z-AA87-01A	72 years, male, black or african american, stage:iii, alive, 1454 days	40.8
TCGA-5N-A9KI-01A	76 years, female, white, stage:iii, dead, 76 days	40.8
TCGA-FD-A3N5-01A	69 years, male, black or african american, stage:ii, dead, 685 days	40.8
TCGA-G2-AA3F-01A	77 years, male, white, stage:iv, alive, 893 days	40.7
TCGA-2F-A9KR-01A	59 years, female, stage:iii, dead, 3183 days	40.7
TCGA-E7-A541-01A	66 years, male, white, stage:ii, dead, 778 days	40.6
TCGA-DK-A1AE-01A	84 years, male, white, stage:iii, alive, 491 days	40.6
TCGA-KQ-A41R-01A	80 years, female, white, stage:ii, alive, 1350 days	40.4
TCGA-ZF-AA4R-01A	67 years, male, white, stage:iv, dead, 1036 days	40.3
TCGA-FJ-A3Z9-01A	72 years, male, white, dead, 385 days	40.2
TCGA-ZF-AA53-01A	60 years, male, white, stage:ii, alive, 1761 days	40.1
TCGA-XF-A8HC-01A	79 years, male, asian, stage:iv, dead, 200 days	40.1
TCGA-GV-A3JV-01A	66 years, male, white, stage:iv, dead, 434 days	40.1
TCGA-GC-A3RC-01A	59 years, male, white, stage:ii, alive, 484 days	40.0
TCGA-FD-A3SL-01A	60 years, male, white, stage:iv, dead, 712 days	40.0
TCGA-GV-A3JZ-01A	55 years, male, white, stage:iv, alive, 603 days	39.8
TCGA-DK-AA6S-01A	60 years, male, white, stage:iii, alive, 5050 days	39.8
TCGA-K4-A3WS-01A	66 years, male, white, stage:iii, alive, 761 days	39.7
TCGA-XF-AAMJ-01A	70 years, male, asian, stage:iii, dead, 1670 days	39.5
TCGA-4Z-AA84-01A	61 years, male, white, stage:iv, alive, 460 days	39.5
TCGA-G2-AA3B-01A	75 years, female, white, stage:ii, alive, 2008 days	39.4
TCGA-FD-A5BU-01A	76 years, female, black or african american, stage:ii, alive, 588 days	39.4
TCGA-ZF-AA4V-01A	66 years, male, white, stage:iii, alive, 1806 days	39.1
TCGA-FD-A6TI-01A	73 years, male, white, stage:iv, dead, 294 days	39.0
TCGA-FD-A43N-01A	76 years, male, white, stage:iii, alive, 230 days	38.9
TCGA-DK-AA6P-01A	72 years, female, white, stage:ii, alive, 457 days	38.9
TCGA-K4-A6FZ-01A	75 years, female, white, stage:iii, alive, 55 days	38.6
TCGA-XF-A8HG-01A	69 years, male, white, stage:iii, dead, 467 days	38.5
TCGA-GC-A3WC-01A	80 years, female, white, stage:iii, alive, 540 days	38.3
TCGA-GV-A3JW-01A	74 years, male, white, stage:ii, alive, 649 days	38.2
TCGA-DK-AA76-01A	64 years, female, white, stage:ii, alive, 366 days	37.7
TCGA-FD-A3N6-01A	43 years, female, black or african american, stage:ii, alive, 851 days	37.6
TCGA-LC-A66R-01A	78 years, male, white, stage:iv, alive, 466 days	37.5
TCGA-GV-A6ZA-01A	54 years, male, white, stage:ii, alive, 691 days	37.5
TCGA-DK-A3IQ-01A	74 years, male, white, stage:iii, dead, 539 days	37.5
TCGA-G2-A2ES-01A	85 years, male, white, stage:ii, dead, 1004 days	37.4
TCGA-4Z-AA82-01A	59 years, male, black or african american, stage:iv, dead, 1556 days	37.3
TCGA-XF-AAMG-01A	49 years, male, white, stage:iii, alive, 3364 days	37.0
TCGA-FD-A3B4-01A	55 years, female, black or african american, stage:iii, dead, 510 days	36.9
TCGA-BL-A0C8-01A	73 years, male, white, stage:i, alive, 1219 days	36.9
TCGA-DK-A1AF-01A	84 years, female, white, stage:iv, alive, 536 days	36.6
TCGA-YC-A8S6-01A	71 years, male, white, stage:ii, alive, 293 days	36.3
TCGA-ZF-AA51-01A	69 years, female, white, stage:ii, alive, 1714 days	36.3
TCGA-DK-AA6Q-01A	61 years, female, white, stage:iv, dead, 413 days	36.1
TCGA-ZF-A9RL-01A	61 years, male, white, stage:ii, alive, 2703 days	36.0
TCGA-K4-A3WV-01A	77 years, female, white, stage:ii, alive, 646 days	35.5
TCGA-DK-A1AD-01A	69 years, male, white, stage:iv, alive, 3420 days	35.5
TCGA-FD-A43Y-01A	65 years, male, white, stage:iii, dead, 474 days	35.5
TCGA-MV-A51V-01A	75 years, male, white, stage:iii, alive, 410 days	35.4
TCGA-XF-AAMW-01A	79 years, female, white, stage:iv, dead, 253 days	35.3
TCGA-2F-A9KQ-01A	69 years, male, white, stage:iii, alive, 2886 days	35.3
TCGA-XF-AAN4-01A	77 years, female, white, stage:iii, dead, 823 days	35.3
TCGA-CF-A9FL-01A	85 years, male, asian, stage:iii, dead, 565 days	34.9
TCGA-XF-A9T6-01A	88 years, female, white, stage:iii, alive, 64 days	34.9
TCGA-DK-A1AB-01A	74 years, female, white, stage:iv, dead, 508 days	34.8
TCGA-XF-AAN5-01A	61 years, female, white, stage:iii, alive, 2293 days	34.8
TCGA-GV-A3QI-01A	47 years, male, white, stage:iii, alive, 1110 days	34.7
TCGA-XF-AAN8-01A	74 years, female, white, stage:iii, dead, 118 days	34.5
TCGA-DK-A2I1-01A	73 years, female, white, stage:ii, alive, 546 days	34.2
TCGA-ZF-A9RE-01A	78 years, female, white, stage:ii, dead, 106 days	34.0
TCGA-CU-A3KJ-01A	75 years, male, white, stage:iii, alive, 562 days	33.8
TCGA-CF-A3MI-01A	62 years, male, asian, stage:ii, alive, 370 days	33.8
TCGA-CF-A9FF-01A	52 years, male, asian, stage:ii, alive, 361 days	33.6
TCGA-BL-A5ZZ-01A	80 years, female, white, stage:iii, alive, 377 days	33.2
TCGA-C4-A0F1-01A	71 years, male, stage:iii, alive, 89 days	33.1
TCGA-DK-A2I6-01A	81 years, male, white, stage:iv, alive, 2656 days	32.9
TCGA-DK-AA6M-01A	64 years, female, white, stage:ii, alive, 1582 days	32.9
TCGA-2F-A9KT-01A	83 years, male, white, stage:ii, alive, 3314 days	32.9
TCGA-HQ-A5NE-01A	56 years, male, stage:iii, dead, 370 days	32.8
TCGA-E7-A6MD-01A	66 years, male, white, stage:iv, alive, 129 days	32.1
TCGA-DK-A1A7-01A	67 years, female, white, stage:iv, alive, 560 days	31.9
TCGA-FD-A5BV-01A	47 years, female, white, stage:iii, dead, 163 days	31.6
TCGA-K4-A6MB-01A	64 years, male, white, stage:iv, alive, 469 days	31.3
TCGA-H4-A2HO-01A	53 years, male, white, stage:iii, alive, 46 days	31.3
TCGA-GV-A3QK-01B	56 years, female, white, stage:iv, alive, 832 days	31.0
TCGA-K4-A54R-01A	59 years, male, white, stage:ii, alive, 842 days	31.0
TCGA-DK-A3IK-01A	87 years, male, white, stage:iv, dead, 146 days	30.8
TCGA-FD-A3SN-01A	79 years, male, white, stage:iii, alive, 887 days	30.4
TCGA-DK-A3WW-01A	57 years, male, white, stage:iii, alive, 633 days	30.2
TCGA-CU-A3YL-01A	67 years, male, white, stage:iii, alive, 906 days	29.2
TCGA-BT-A3PJ-01A	76 years, male, white, stage:iii, alive, 789 days	29.1
TCGA-BT-A42E-01A	74 years, male, white, stage:iii, alive, 1108 days	28.8
TCGA-FJ-A3Z7-01A	76 years, male, white, stage:iv, alive, 945 days	28.8
TCGA-XF-A9T8-01A	64 years, male, white, stage:iii, dead, 418 days	28.7
TCGA-FD-A3B8-01A	56 years, male, white, stage:ii, alive, 384 days	27.9
TCGA-BT-A0YX-01A	70 years, female, white, stage:iii, dead, 400 days	27.6
TCGA-BT-A20R-01A	79 years, female, white, stage:iv, dead, 154 days	26.7
TCGA-BL-A13J-01A	65 years, male, white, stage:iv, dead, 81 days	25.2
TCGA-DK-A3X1-01A	78 years, female, white, stage:iii, alive, 2009 days	25.0
TCGA-BT-A20N-01A	72 years, male, stage:iii, dead, 795 days	23.7
TCGA-DK-A6B5-01A	45 years, male, white, stage:iv, alive, 1542 days	23.6
TCGA-UY-A9PF-01A	78 years, male, white, stage:iv, alive, 117 days	23.6
TCGA-LT-A5Z6-01A	56 years, male, white, stage:ii, alive, 474 days	23.0
TCGA-FJ-A3ZF-01A	73 years, male, white, stage:iii, alive, 524 days	21.1
TCGA-CF-A3MF-01A	34 years, male, asian, stage:iii, alive, 383 days	20.5
TCGA-KQ-A41Q-01A	89 years, male, white, stage:iii, alive, 1429 days	19.6
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UROTHELIAL CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells. Read more	Antibody HPA047106
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Click images for details