Expression of VTN in liver cancer - The Human Protein Atlas

LIVER CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

VTN is prognostic, high expression is favorable in liver cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 1379.25
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

2216.6

Number of samples

365

Samples

Sample	Description	FPKM
TCGA-ES-A2HS-01A	80 years, male, white, stage:i, dead, 688 days	6970.5
TCGA-DD-A4NN-01A	56 years, female, white, stage:i, dead, 899 days	6149.5
TCGA-CC-5259-01A	60 years, female, asian, stage:iiic, alive, 250 days	5639.3
TCGA-KR-A7K2-01A	64 years, male, white, stage:i, alive, 829 days	5500.0
TCGA-FV-A4ZP-01A	78 years, male, white, stage:iiia, dead, 2486 days	5367.5
TCGA-UB-A7ME-01A	51 years, male, asian, stage:i, alive, 486 days	5365.0
TCGA-DD-A3A9-01A	64 years, female, white, stage:ivb, dead, 931 days	5222.1
TCGA-G3-A5SI-01A	44 years, male, asian, stage:ii, dead, 768 days	5080.4
TCGA-FV-A496-01A	84 years, female, white, stage:i, alive, 10 days	4872.3
TCGA-G3-AAV0-01A	58 years, male, asian, stage:i, alive, 476 days	4800.7
TCGA-2Y-A9H6-01A	68 years, female, white, stage:i, alive, 357 days	4723.8
TCGA-ED-A7PY-01A	20 years, female, asian, stage:ii, alive, 390 days	4680.2
TCGA-BC-A5W4-01A	69 years, male, white, stage:iiia, dead, 547 days	4674.2
TCGA-BC-A217-01A	75 years, female, white, stage:ii, dead, 1397 days	4624.1
TCGA-BD-A2L6-01A	69 years, male, white, alive, 1363 days	4592.1
TCGA-BC-A10Y-01A	76 years, male, white, dead, 711 days	4554.0
TCGA-G3-A7M8-01A	31 years, male, asian, stage:i, alive, 430 days	4526.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:i, alive, 655 days	4401.3
TCGA-DD-AADY-01A	55 years, female, asian, stage:i, alive, 555 days	4397.4
TCGA-DD-AACF-01A	68 years, male, asian, stage:i, dead, 365 days	4324.5
TCGA-G3-A25Y-01A	52 years, female, asian, stage:i, dead, 452 days	4267.0
TCGA-DD-AACS-01A	39 years, male, asian, stage:i, alive, 1804 days	4257.1
TCGA-DD-AADI-01A	43 years, female, asian, stage:i, alive, 1085 days	4240.3
TCGA-FV-A23B-01A	70 years, female, white, stage:ii, dead, 1852 days	4162.3
TCGA-2Y-A9H7-01A	81 years, female, white, stage:i, alive, 1168 days	4130.6
TCGA-EP-A2KA-01A	52 years, female, white, stage:iiia, dead, 627 days	4105.3
TCGA-DD-A11D-01A	57 years, female, white, stage:i, dead, 1560 days	4087.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:iii, dead, 3125 days	4077.5
TCGA-T1-A6J8-01A	68 years, male, white, alive, 23 days	4065.5
TCGA-DD-AAE7-01A	72 years, male, asian, stage:i, alive, 644 days	4032.0
TCGA-ED-A66Y-01A	51 years, female, asian, stage:iiia, dead, 296 days	4031.1
TCGA-DD-AADK-01A	68 years, female, asian, stage:ii, alive, 1049 days	3926.2
TCGA-2Y-A9H8-01A	85 years, female, white, dead, 633 days	3841.3
TCGA-5C-A9VH-01A	70 years, male, white, stage:i, alive, 322 days	3821.2
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:i, alive, 1900 days	3818.9
TCGA-2Y-A9GU-01A	55 years, female, white, stage:i, alive, 1939 days	3816.3
TCGA-K7-A6G5-01A	66 years, male, white, stage:i, alive, 512 days	3803.7
TCGA-DD-A11B-01A	73 years, male, white, stage:i, dead, 14 days	3765.1
TCGA-2Y-A9H9-01A	70 years, male, white, stage:i, alive, 697 days	3739.8
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:iiib, alive, 396 days	3715.9
TCGA-DD-AADP-01A	45 years, male, asian, stage:i, alive, 458 days	3712.0
TCGA-O8-A75V-01A	54 years, male, stage:i, alive, 538 days	3683.2
TCGA-DD-A4NO-01A	66 years, male, white, stage:i, alive, 2245 days	3668.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:i, alive, 1531 days	3613.1
TCGA-DD-AAD3-01A	43 years, male, asian, stage:i, alive, 1295 days	3604.9
TCGA-2Y-A9H3-01A	45 years, male, white, stage:ii, alive, 1516 days	3578.2
TCGA-DD-AADA-01A	66 years, female, asian, stage:i, alive, 1233 days	3552.6
TCGA-CC-A8HS-01A	18 years, male, asian, stage:iiic, dead, 300 days	3550.7
TCGA-RC-A7S9-01A	47 years, female, asian, stage:i, alive, 640 days	3501.3
TCGA-G3-A3CI-01A	71 years, male, white, stage:i, alive, 180 days	3491.1
TCGA-DD-AADJ-01A	70 years, female, asian, stage:i, alive, 1066 days	3466.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:i, alive, 183 days	3456.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:i, alive, 1567 days	3455.4
TCGA-G3-A5SJ-01A	59 years, male, white, stage:i, alive, 698 days	3453.3
TCGA-DD-A4NP-01A	32 years, male, white, stage:i, alive, 3308 days	3434.6
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:i, alive, 2728 days	3428.5
TCGA-DD-AACC-01A	61 years, male, asian, stage:i, dead, 1685 days	3427.0
TCGA-DD-AADV-01A	50 years, male, asian, stage:i, alive, 574 days	3380.1
TCGA-CC-5261-01A	44 years, male, asian, stage:ii, dead, 97 days	3376.0
TCGA-DD-AAVS-01A	56 years, male, asian, stage:i, alive, 1823 days	3373.5
TCGA-EP-A2KB-01A	46 years, female, white, stage:i, dead, 596 days	3340.2
TCGA-DD-AADS-01A	63 years, male, asian, stage:i, alive, 474 days	3304.4
TCGA-ZS-A9CE-01A	79 years, female, white, stage:ii, alive, 1241 days	3285.9
TCGA-ZP-A9D0-01A	67 years, female, black or african american, alive, 1091 days	3271.5
TCGA-ED-A8O5-01A	59 years, female, asian, stage:iiia, alive, 406 days	3270.1
TCGA-DD-A1EB-01A	72 years, female, stage:i, alive, 2017 days	3258.9
TCGA-DD-AAD1-01A	51 years, female, asian, stage:i, alive, 564 days	3258.8
TCGA-UB-A7MA-01A	62 years, female, white, stage:ii, alive, 848 days	3257.2
TCGA-FV-A3R3-01A	38 years, female, white, stage:i, dead, 366 days	3257.1
TCGA-BC-A10S-01A	81 years, male, white, dead, 1423 days	3199.4
TCGA-DD-AACW-01A	43 years, male, asian, stage:i, alive, 1424 days	3178.0
TCGA-DD-A4ND-01A	56 years, female, white, stage:i, alive, 2746 days	3152.5
TCGA-DD-A73G-01A	73 years, female, white, stage:i, alive, 3478 days	3139.9
TCGA-MR-A520-01A	58 years, male, white, stage:i, alive, 229 days	3133.3
TCGA-DD-AAE1-01A	52 years, male, asian, stage:i, alive, 552 days	3107.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:iiia, alive, 20 days	3102.0
TCGA-CC-A9FS-01A	55 years, male, asian, stage:ii, alive, 211 days	3100.0
TCGA-G3-A7M5-01A	76 years, male, asian, stage:i, alive, 447 days	3076.0
TCGA-ED-A7XO-01A	29 years, male, asian, stage:iiia, alive, 427 days	3047.8
TCGA-DD-A73D-01A	68 years, female, white, stage:ii, alive, 693 days	3043.0
TCGA-DD-AAC9-01A	51 years, male, asian, stage:i, alive, 347 days	3039.0
TCGA-BD-A3EP-01A	76 years, female, black or african american, stage:i, alive, 409 days	3028.6
TCGA-RC-A7SK-01A	59 years, male, asian, stage:i, alive, 472 days	3027.5
TCGA-HP-A5N0-01A	88 years, female, dead, 1147 days	3024.9
TCGA-DD-A11A-01A	67 years, male, black or african american, stage:i, alive, 79 days	3022.9
TCGA-DD-A3A3-01A	45 years, male, asian, stage:i, dead, 535 days	3018.6
TCGA-DD-AADW-01A	48 years, male, asian, stage:i, alive, 587 days	3007.2
TCGA-G3-AAUZ-01A	48 years, male, stage:i, alive, 480 days	2967.0
TCGA-ZP-A9CY-01A	66 years, female, white, alive, 782 days	2952.7
TCGA-DD-AACY-01A	61 years, male, asian, stage:i, alive, 1450 days	2952.1
TCGA-ED-A4XI-01A	58 years, male, asian, stage:ii, alive, 819 days	2929.4
TCGA-DD-AAVV-01A	56 years, male, asian, stage:ii, alive, 2455 days	2913.2
TCGA-ZP-A9CV-01A	59 years, male, white, dead, 1088 days	2910.4
TCGA-DD-A39Z-01A	43 years, female, stage:ii, dead, 601 days	2907.8
TCGA-BC-A69I-01A	69 years, male, white, stage:i, alive, 387 days	2894.2
TCGA-DD-A118-01A	77 years, female, white, stage:ii, alive, 3437 days	2886.7
TCGA-ED-A66X-01A	35 years, male, asian, stage:iiia, alive, 406 days	2868.7
TCGA-DD-A113-01A	55 years, female, white, stage:ii, alive, 2425 days	2863.2
TCGA-MI-A75G-01A	63 years, male, white, stage:ii, alive, 698 days	2857.0
TCGA-DD-A73C-01A	65 years, female, white, stage:iiia, alive, 701 days	2855.9
TCGA-ED-A8O6-01A	50 years, female, asian, stage:iiia, dead, 56 days	2837.5
TCGA-DD-A4NL-01A	46 years, male, white, stage:i, alive, 1711 days	2817.8
TCGA-UB-AA0U-01A	60 years, male, white, stage:ii, alive, 327 days	2811.7
TCGA-DD-A11C-01A	69 years, male, white, stage:i, alive, 662 days	2809.0
TCGA-DD-A1EH-01A	23 years, male, white, stage:iii, alive, 1495 days	2800.4
TCGA-5C-AAPD-01A	61 years, male, asian, stage:ii, alive, 20 days	2798.5
TCGA-FV-A2QR-01A	male, white, stage:i, dead, 581 days	2797.6
TCGA-DD-AACV-01A	53 years, male, asian, stage:i, alive, 1531 days	2792.8
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:i, dead, 19 days	2786.2
TCGA-XR-A8TG-01A	59 years, male, white, stage:i, alive, 898 days	2783.2
TCGA-FV-A3I1-01A	female, white, stage:ii, dead, 247 days	2780.4
TCGA-DD-A73F-01A	77 years, female, white, stage:i, alive, 1085 days	2779.8
TCGA-K7-A5RF-01A	64 years, male, white, stage:i, alive, 631 days	2762.3
TCGA-G3-A5SM-01A	58 years, male, white, stage:ii, alive, 520 days	2758.5
TCGA-2Y-A9GT-01A	51 years, male, white, stage:i, dead, 1624 days	2742.4
TCGA-FV-A495-01A	51 years, female, white, stage:ii, alive, 1 days	2722.8
TCGA-DD-AACN-01A	32 years, male, asian, stage:i, alive, 1302 days	2709.7
TCGA-DD-AAEA-01A	65 years, male, asian, stage:i, alive, 575 days	2709.6
TCGA-DD-AACJ-01A	75 years, male, asian, stage:ii, alive, 2102 days	2686.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:ii, alive, 1618 days	2682.0
TCGA-G3-A7M7-01A	65 years, male, white, stage:i, alive, 361 days	2660.3
TCGA-CC-5264-01A	71 years, male, asian, stage:iiia, dead, 102 days	2651.5
TCGA-2Y-A9H5-01A	59 years, female, white, stage:i, dead, 555 days	2636.7
TCGA-NI-A4U2-01A	71 years, male, white, stage:iiia, dead, 1791 days	2619.6
TCGA-5R-AAAM-01A	65 years, female, white, stage:ii, dead, 46 days	2616.0
TCGA-DD-A73B-01A	72 years, female, white, stage:i, dead, 283 days	2606.3
TCGA-WQ-AB4B-01A	62 years, male, white, stage:ii, alive, 395 days	2605.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:i, alive, 729 days	2586.6
TCGA-XR-A8TC-01A	43 years, female, white, stage:i, alive, 1339 days	2586.5
TCGA-DD-AACO-01A	40 years, male, asian, stage:i, alive, 1876 days	2581.3
TCGA-BC-A69H-01A	64 years, male, white, stage:ii, alive, 444 days	2579.0
TCGA-BC-A110-01A	51 years, female, black or african american, dead, 2116 days	2565.8
TCGA-DD-AAED-01A	51 years, male, asian, stage:i, alive, 763 days	2561.6
TCGA-G3-A25V-01A	68 years, male, white, stage:i, alive, 860 days	2558.8
TCGA-BC-A216-01A	62 years, female, white, stage:iiia, alive, 1351 days	2544.3
TCGA-DD-AAD8-01A	73 years, female, asian, stage:i, alive, 1219 days	2543.6
TCGA-DD-AAD2-01A	66 years, male, asian, stage:i, alive, 658 days	2514.1
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:ii, alive, 6 days	2513.3
TCGA-2Y-A9GV-01A	54 years, female, white, stage:i, dead, 2532 days	2468.4
TCGA-ZP-A9D1-01A	56 years, female, white, alive, 21 days	2460.4
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:i, dead, 438 days	2451.9
TCGA-LG-A9QD-01A	68 years, male, white, stage:iiia, alive, 366 days	2447.6
TCGA-XR-A8TF-01A	74 years, male, white, stage:i, dead, 693 days	2444.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:iiia, alive, 500 days	2441.0
TCGA-2Y-A9HB-01A	66 years, male, stage:i, alive, 260 days	2436.3
TCGA-CC-A123-01A	24 years, female, asian, stage:iiia, alive, 219 days	2436.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, alive, 706 days	2428.3
TCGA-2Y-A9GS-01A	58 years, male, white, dead, 724 days	2423.4
TCGA-CC-A3MC-01A	54 years, male, asian, stage:iiia, alive, 363 days	2420.4
TCGA-DD-A4NK-01A	80 years, female, white, stage:iiia, dead, 1210 days	2412.5
TCGA-DD-AAEH-01A	73 years, male, asian, stage:i, alive, 784 days	2411.0
TCGA-CC-A7IL-01A	61 years, male, asian, stage:iiia, dead, 278 days	2410.3
TCGA-DD-A73A-01A	71 years, male, white, stage:i, alive, 728 days	2410.0
TCGA-PD-A5DF-01A	58 years, female, white, stage:iiib, dead, 639 days	2403.2
TCGA-DD-AAW0-01A	54 years, male, asian, stage:i, alive, 2015 days	2391.3
TCGA-ZP-A9D2-01A	51 years, male, white, dead, 765 days	2388.8
TCGA-CC-A9FW-01A	68 years, male, asian, stage:iiia, alive, 248 days	2379.1
TCGA-DD-AAEE-01A	55 years, male, asian, stage:i, alive, 810 days	2372.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:ii, dead, 12 days	2341.8
TCGA-UB-A7MF-01A	57 years, male, white, stage:iiia, dead, 214 days	2341.1
TCGA-DD-A115-01A	53 years, male, white, stage:iiia, dead, 2542 days	2337.4
TCGA-EP-A3JL-01A	76 years, male, white, stage:i, alive, 303 days	2320.2
TCGA-RC-A7SF-01A	66 years, male, asian, stage:i, alive, 579 days	2315.7
TCGA-WX-AA46-01A	62 years, male, white, stage:ii, alive, 756 days	2309.1
TCGA-2Y-A9GW-01A	64 years, male, white, stage:i, dead, 1271 days	2308.2
TCGA-ZS-A9CD-01A	73 years, male, white, stage:ii, dead, 1386 days	2295.8
TCGA-G3-A6UC-01A	65 years, male, white, stage:iiib, alive, 671 days	2286.7
TCGA-DD-AAVW-01A	35 years, male, asian, stage:i, alive, 2317 days	2285.3
TCGA-DD-A3A2-01A	76 years, female, white, stage:i, dead, 2131 days	2271.7
TCGA-DD-AAVU-01A	46 years, male, asian, stage:ii, alive, 2202 days	2258.1
TCGA-DD-A1EJ-01A	71 years, female, white, stage:iiic, dead, 1005 days	2238.4
TCGA-DD-A3A7-01A	67 years, male, stage:iiib, dead, 419 days	2229.6
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:ii, dead, 848 days	2203.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:ivb, dead, 558 days	2189.1
TCGA-MI-A75E-01A	61 years, male, white, stage:iiic, alive, 507 days	2188.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:iiia, alive, 1145 days	2170.9
TCGA-G3-A25X-01A	73 years, male, asian, stage:ii, alive, 1779 days	2166.4
TCGA-BC-A10X-01A	52 years, female, white, stage:iiia, dead, 770 days	2145.7
TCGA-DD-AAVX-01A	38 years, male, asian, stage:ii, alive, 1570 days	2134.4
TCGA-G3-A3CH-01A	53 years, male, asian, stage:iiia, alive, 780 days	2126.3
TCGA-DD-AAE3-01A	50 years, male, asian, stage:i, alive, 566 days	2091.7
TCGA-4R-AA8I-01A	66 years, male, white, stage:ii, dead, 262 days	2078.1
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:i, alive, 1452 days	2057.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:ii, dead, 279 days	2051.7
TCGA-DD-AAE2-01A	51 years, male, asian, stage:i, alive, 638 days	2049.6
TCGA-MI-A75I-01A	61 years, male, black or african american, alive, 630 days	2048.0
TCGA-CC-A3MB-01A	36 years, male, asian, stage:iiia, dead, 315 days	2019.7
TCGA-G3-AAV5-01A	67 years, male, white, stage:ii, alive, 354 days	2018.9
TCGA-ZS-A9CF-01A	64 years, male, white, stage:ii, alive, 2412 days	2004.2
TCGA-BD-A3ER-01A	62 years, male, white, stage:ii, alive, 1115 days	1996.0
TCGA-LG-A6GG-01A	79 years, female, white, stage:ii, alive, 387 days	1994.0
TCGA-DD-AADC-01A	53 years, male, asian, stage:i, dead, 425 days	1992.8
TCGA-DD-A3A1-01A	65 years, male, stage:iiia, dead, 233 days	1990.1
TCGA-DD-AADO-01A	55 years, male, asian, stage:i, alive, 453 days	1989.2
TCGA-DD-AADQ-01A	59 years, male, asian, stage:ii, alive, 436 days	1987.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:i, dead, 194 days	1986.7
TCGA-DD-AADR-01A	58 years, male, asian, stage:i, alive, 2028 days	1978.7
TCGA-DD-A116-01A	68 years, male, asian, stage:iiia, dead, 1622 days	1975.1
TCGA-DD-A1EG-01A	77 years, male, white, stage:i, dead, 1372 days	1973.1
TCGA-DD-AADD-01A	51 years, male, asian, stage:i, alive, 1231 days	1972.9
TCGA-CC-A7IF-01A	59 years, male, asian, stage:iiia, dead, 649 days	1970.9
TCGA-DD-AAVR-01A	44 years, male, asian, stage:i, alive, 2513 days	1963.2
TCGA-DD-AACK-01A	70 years, male, asian, stage:i, alive, 9 days	1961.0
TCGA-KR-A7K7-01A	61 years, female, white, stage:ii, alive, 951 days	1950.3
TCGA-DD-AAEG-01A	59 years, female, asian, stage:i, alive, 719 days	1947.1
TCGA-DD-A119-01A	40 years, male, asian, stage:iv, dead, 223 days	1944.3
TCGA-RC-A6M4-01A	74 years, female, white, stage:iiia, alive, 22 days	1939.4
TCGA-CC-A5UE-01A	48 years, male, asian, stage:iiib, dead, 272 days	1919.7
TCGA-G3-A5SK-01A	58 years, male, white, stage:i, alive, 744 days	1918.0
TCGA-DD-A4NV-01A	61 years, male, white, stage:iiia, alive, 2398 days	1917.8
TCGA-ED-A627-01A	74 years, male, white, stage:i, alive, 423 days	1915.0
TCGA-UB-A7MB-01A	24 years, male, white, stage:ii, alive, 601 days	1914.1
TCGA-WJ-A86L-01A	68 years, female, white, stage:i, alive, 345 days	1905.2
TCGA-BC-4073-01B	73 years, male, white, stage:iiia, alive, 849 days	1893.5
TCGA-GJ-A9DB-01A	68 years, male, white, stage:i, dead, 67 days	1888.6
TCGA-BC-A112-01A	80 years, male, white, dead, 153 days	1888.4
TCGA-UB-AA0V-01A	69 years, female, white, stage:i, alive, 314 days	1882.1
TCGA-DD-A3A8-01A	75 years, male, white, stage:ii, dead, 11 days	1874.5
TCGA-RC-A7SH-01A	42 years, male, asian, stage:ii, alive, 468 days	1872.2
TCGA-GJ-A6C0-01A	75 years, female, white, stage:ii, dead, 31 days	1871.3
TCGA-2Y-A9H1-01A	58 years, male, white, stage:i, dead, 1229 days	1866.4
TCGA-DD-AAE4-01A	49 years, female, asian, stage:i, alive, 608 days	1820.1
TCGA-DD-AAEK-01A	51 years, male, asian, stage:ii, alive, 1067 days	1797.9
TCGA-DD-A4NJ-01A	54 years, female, white, stage:ii, alive, 928 days	1791.2
TCGA-ZP-A9D4-01A	64 years, female, white, alive, 395 days	1787.5
TCGA-RC-A6M6-01A	75 years, male, white, stage:ii, alive, 9 days	1777.7
TCGA-G3-A7M6-01A	60 years, female, white, stage:i, alive, 632 days	1770.0
TCGA-DD-A1ED-01A	68 years, male, white, stage:i, alive, 2301 days	1767.3
TCGA-BC-A3KF-01A	66 years, female, white, stage:i, alive, 8 days	1757.0
TCGA-DD-AACE-01A	62 years, male, asian, stage:i, alive, 2184 days	1713.2
TCGA-DD-AAD0-01A	73 years, female, asian, stage:i, alive, 137 days	1712.5
TCGA-DD-AAE6-01A	59 years, female, asian, stage:i, alive, 141 days	1705.5
TCGA-HP-A5MZ-01A	62 years, male, stage:i, dead, 91 days	1702.2
TCGA-DD-A4NI-01A	67 years, male, white, stage:ii, alive, 816 days	1698.2
TCGA-RC-A7SB-01A	53 years, male, asian, stage:ii, alive, 588 days	1694.3
TCGA-DD-AACH-01A	69 years, male, asian, stage:ii, dead, 195 days	1683.7
TCGA-DD-A4NR-01A	85 years, female, white, stage:i, dead, 9 days	1678.6
TCGA-BC-4072-01B	74 years, female, white, stage:iiia, dead, 1490 days	1677.3
TCGA-2Y-A9H0-01A	49 years, male, white, stage:iiia, alive, 3675 days	1658.5
TCGA-CC-A7IH-01A	58 years, male, asian, stage:iiia, alive, 365 days	1635.1
TCGA-BC-A10R-01A	66 years, female, white, dead, 308 days	1607.7
TCGA-EP-A26S-01A	70 years, male, white, stage:i, alive, 608 days	1600.3
TCGA-DD-A1EF-01A	57 years, female, white, stage:i, dead, 394 days	1599.1
TCGA-DD-AACT-01A	69 years, female, asian, stage:i, alive, 1562 days	1590.7
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:i, alive, 519 days	1589.8
TCGA-DD-AAE0-01A	45 years, female, asian, stage:iiia, alive, 555 days	1572.1
TCGA-DD-A1EC-01A	20 years, female, white, stage:i, alive, 602 days	1565.3
TCGA-MI-A75C-01A	64 years, male, white, stage:i, alive, 291 days	1558.5
TCGA-G3-A25S-01A	64 years, male, white, stage:i, dead, 416 days	1545.7
TCGA-NI-A8LF-01A	74 years, male, white, stage:i, alive, 799 days	1530.2
TCGA-DD-AACP-01A	65 years, male, asian, stage:i, alive, 415 days	1521.2
TCGA-2Y-A9GX-01A	68 years, male, white, stage:i, alive, 2442 days	1516.0
TCGA-DD-AAW2-01A	69 years, male, asian, stage:i, alive, 1855 days	1515.0
TCGA-DD-AADF-01A	64 years, female, asian, stage:i, dead, 115 days	1510.5
TCGA-DD-A39X-01A	78 years, female, white, stage:i, dead, 1694 days	1507.4
TCGA-BC-A8YO-01A	66 years, female, white, stage:iiic, alive, 562 days	1504.7
TCGA-WX-AA44-01A	64 years, female, white, stage:i, alive, 615 days	1495.3
TCGA-G3-A5SL-01A	70 years, male, white, stage:ii, alive, 621 days	1493.3
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:ii, alive, 594 days	1476.2
TCGA-DD-AACQ-01A	50 years, male, asian, stage:ii, dead, 432 days	1469.2
TCGA-CC-5263-01A	35 years, male, asian, stage:iiia, dead, 129 days	1446.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:ii, dead, 36 days	1445.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:i, alive, 1633 days	1434.4
TCGA-XR-A8TD-01A	49 years, female, white, stage:iiib, alive, 1030 days	1428.0
TCGA-ED-A7XP-01A	53 years, female, asian, stage:ii, alive, 400 days	1419.9
TCGA-DD-A4NS-01A	62 years, female, white, stage:i, dead, 2456 days	1414.5
TCGA-DD-AAVY-01A	56 years, male, asian, stage:iiia, alive, 1970 days	1400.7
TCGA-ED-A5KG-01A	60 years, female, asian, stage:ii, alive, 854 days	1397.2
TCGA-CC-A7IG-01A	47 years, male, asian, stage:ii, dead, 299 days	1394.4
TCGA-EP-A12J-01A	63 years, male, black or african american, stage:i, alive, 570 days	1388.6
TCGA-KR-A7K8-01A	57 years, male, stage:i, alive, 906 days	1385.8
TCGA-G3-AAV2-01A	50 years, male, white, stage:i, alive, 372 days	1385.0
TCGA-CC-A5UC-01A	63 years, male, asian, stage:iiia, dead, 347 days	1373.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:iiib, dead, 56 days	1360.9
TCGA-DD-AACD-01A	48 years, male, asian, stage:i, dead, 381 days	1350.0
TCGA-DD-AADN-01A	59 years, male, asian, stage:i, alive, 898 days	1342.1
TCGA-CC-A8HU-01A	39 years, female, asian, stage:iiia, dead, 344 days	1341.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:i, alive, 879 days	1334.2
TCGA-BC-A10T-01A	76 years, male, white, dead, 837 days	1334.0
TCGA-DD-A114-01A	42 years, male, black or african american, stage:ii, dead, 1149 days	1332.2
TCGA-DD-A4NQ-01A	60 years, male, white, stage:ii, dead, 373 days	1324.1
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:ii, alive, 94 days	1323.2
TCGA-DD-AAEB-01A	60 years, male, asian, stage:i, alive, 478 days	1311.7
TCGA-DD-AACG-01A	52 years, male, asian, stage:ii, dead, 469 days	1287.9
TCGA-EP-A3RK-01A	73 years, male, white, stage:iiia, alive, 363 days	1287.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:ii, alive, 2415 days	1269.7
TCGA-RC-A6M5-01A	20 years, female, white, stage:iva, alive, 15 days	1258.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:ii, alive, 341 days	1240.1
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:ii, alive, 1098 days	1212.7
TCGA-CC-5262-01A	67 years, male, asian, stage:iiic, dead, 103 days	1211.0
TCGA-DD-AADB-01A	51 years, male, asian, stage:i, alive, 1242 days	1202.8
TCGA-DD-AADL-01A	58 years, male, asian, stage:i, alive, 636 days	1195.6
TCGA-CC-5258-01A	48 years, male, asian, stage:ii, dead, 129 days	1191.8
TCGA-KR-A7K0-01A	65 years, male, white, stage:i, dead, 65 days	1185.1
TCGA-DD-A4NH-01A	65 years, female, white, stage:iiib, alive, 917 days	1163.5
TCGA-DD-A4NE-01A	75 years, female, white, stage:iiia, dead, 660 days	1163.3
TCGA-DD-A39V-01A	77 years, male, white, stage:ii, dead, 643 days	1131.1
TCGA-BC-A10W-01A	50 years, male, asian, dead, 91 days	1114.8
TCGA-5C-A9VG-01A	58 years, male, white, stage:ii, alive, 328 days	1113.9
TCGA-DD-AADU-01A	60 years, male, asian, stage:ii, alive, 554 days	1108.1
TCGA-BC-A3KG-01A	68 years, female, white, stage:ii, alive, 680 days	1095.4
TCGA-G3-AAV6-01A	53 years, female, white, stage:iiia, dead, 65 days	1093.1
TCGA-LG-A9QC-01A	48 years, male, white, stage:i, alive, 425 days	1089.1
TCGA-ED-A459-01A	47 years, male, asian, stage:ii, alive, 910 days	1086.5
TCGA-G3-A3CK-01A	61 years, male, asian, stage:i, alive, 585 days	1084.2
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:i, dead, 52 days	1083.9
TCGA-BC-A10Z-01A	62 years, female, white, stage:i, dead, 34 days	1076.9
TCGA-WX-AA47-01A	33 years, female, white, stage:iiia, dead, 556 days	1047.6
TCGA-DD-AACZ-01A	63 years, female, asian, stage:i, dead, 171 days	1024.0
TCGA-MI-A75H-01A	77 years, male, white, alive, 747 days	1011.0
TCGA-G3-A25U-01A	63 years, female, asian, stage:i, alive, 1636 days	1006.9
TCGA-BC-A10U-01A	69 years, male, white, dead, 837 days	988.3
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:i, alive, 12 days	985.5
TCGA-2Y-A9GY-01A	64 years, female, white, stage:ii, dead, 757 days	964.3
TCGA-K7-AAU7-01A	61 years, male, white, stage:ii, alive, 359 days	950.0
TCGA-DD-AAW1-01A	55 years, male, asian, stage:iiia, alive, 1989 days	936.4
TCGA-CC-A7IE-01A	57 years, male, asian, stage:iiia, dead, 217 days	935.5
TCGA-DD-A4NB-01A	25 years, male, white, stage:i, alive, 989 days	932.6
TCGA-DD-AAD6-01A	66 years, male, asian, stage:iiia, alive, 672 days	851.7
TCGA-CC-A7IK-01A	59 years, male, asian, stage:iiia, dead, 262 days	844.2
TCGA-DD-A4NG-01A	77 years, male, white, stage:iiia, dead, 802 days	839.4
TCGA-DD-AAE9-01A	69 years, male, asian, stage:i, alive, 722 days	835.9
TCGA-G3-AAV1-01A	51 years, male, asian, stage:iiic, dead, 359 days	831.7
TCGA-G3-AAV3-01A	58 years, female, white, stage:ii, alive, 412 days	804.1
TCGA-5R-AA1D-01A	17 years, female, white, stage:iiia, alive, 449 days	788.8
TCGA-DD-AAVP-01A	48 years, male, asian, stage:i, alive, 2752 days	787.8
TCGA-DD-A4NA-01A	67 years, female, white, stage:iiic, alive, 1008 days	722.1
TCGA-DD-A3A4-01A	37 years, male, white, stage:iiia, dead, 612 days	667.4
TCGA-XR-A8TE-01A	16 years, male, white, stage:iiia, alive, 925 days	661.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:iiia, dead, 140 days	661.4
TCGA-DD-A1EE-01A	73 years, male, white, stage:iiia, dead, 349 days	661.1
TCGA-DD-AACB-01A	74 years, female, asian, stage:i, alive, 2324 days	632.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:i, alive, 673 days	623.1
TCGA-DD-AACA-01A	65 years, male, asian, stage:i, alive, 2301 days	621.6
TCGA-ED-A97K-01A	54 years, male, asian, stage:iiia, alive, 6 days	618.9
TCGA-G3-A25T-01A	45 years, female, white, stage:iiia, alive, 1553 days	616.4
TCGA-G3-AAV4-01A	83 years, female, white, stage:i, dead, 27 days	614.2
TCGA-WQ-A9G7-01A	female, white, alive, 30 days	483.1
TCGA-CC-A7II-01A	55 years, male, asian, stage:iiia, alive, 399 days	457.0
TCGA-2Y-A9H2-01A	64 years, female, white, stage:i, alive, 1731 days	456.0
TCGA-DD-AACX-01A	66 years, male, asian, stage:ii, alive, 170 days	451.8
TCGA-DD-AACL-01A	66 years, female, asian, stage:i, dead, 107 days	443.4
TCGA-G3-AAV7-01A	38 years, male, asian, stage:ii, alive, 361 days	425.3
TCGA-DD-A4NF-01A	72 years, male, white, stage:i, alive, 942 days	408.1
TCGA-DD-A73E-01A	66 years, male, white, stage:i, alive, 44 days	399.9
TCGA-DD-A39W-01A	29 years, female, white, stage:iii, dead, 827 days	367.8
TCGA-CC-A5UD-01A	45 years, male, asian, stage:iiia, dead, 304 days	362.9
TCGA-BC-A10Q-01A	72 years, female, white, dead, 1135 days	352.9
TCGA-CC-A3MA-01A	61 years, male, asian, stage:iiia, dead, 303 days	352.3
TCGA-DD-A39Y-01A	67 years, male, asian, stage:i, dead, 171 days	345.8
TCGA-DD-AAC8-01A	72 years, male, asian, stage:i, dead, 16 days	319.6
TCGA-ED-A7PX-01A	48 years, female, asian, stage:ii, alive, 6 days	313.1
TCGA-CC-5260-01A	61 years, female, asian, stage:iiic, dead, 87 days	293.5
TCGA-ED-A82E-01A	60 years, female, asian, stage:iiia, alive, 408 days	285.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:ii, dead, 415 days	276.1
TCGA-5R-AA1C-01A	57 years, male, white, stage:ii, alive, 520 days	271.3
TCGA-MR-A8JO-01A	34 years, male, white, stage:i, alive, 330 days	244.6
TCGA-CC-A1HT-01A	50 years, male, asian, stage:iiia, dead, 101 days	209.8
TCGA-DD-AA3A-01A	81 years, female, white, stage:i, dead, 410 days	170.7
TCGA-DD-AAD5-01A	54 years, male, asian, stage:i, alive, 1345 days	156.5
TCGA-YA-A8S7-01A	69 years, male, white, stage:iiia, dead, 412 days	111.5
TCGA-FV-A3I0-01A	76 years, female, white, stage:ii, alive, 848 days	101.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:ii, dead, 3258 days	7.2
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:ii, alive, 382 days	1.2
TCGA-CC-A3M9-01A	45 years, male, asian, stage:iiia, dead, 300 days	1.1
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells. Read more	Antibody HPA060933	Antibody HPA068011	Antibody CAB016695	Antibody CAB016765
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Click images for details