Expression of HMGCS2 in liver cancer - The Human Protein Atlas

LIVER CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

HMGCS2 is prognostic, high expression is favorable in liver cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 265.41
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

441.7

Number of samples

365

Samples

Sample	Description	FPKM
TCGA-DD-A3A2-01A	76 years, female, white, stage:i, dead, 2131 days	2036.3
TCGA-G3-A3CI-01A	71 years, male, white, stage:i, alive, 180 days	1887.0
TCGA-DD-AADY-01A	55 years, female, asian, stage:i, alive, 555 days	1664.6
TCGA-DD-A73C-01A	65 years, female, white, stage:iiia, alive, 701 days	1607.3
TCGA-DD-A113-01A	55 years, female, white, stage:ii, alive, 2425 days	1592.4
TCGA-G3-A25U-01A	63 years, female, asian, stage:i, alive, 1636 days	1556.3
TCGA-DD-A11A-01A	67 years, male, black or african american, stage:i, alive, 79 days	1525.5
TCGA-G3-A5SK-01A	58 years, male, white, stage:i, alive, 744 days	1440.7
TCGA-2Y-A9GU-01A	55 years, female, white, stage:i, alive, 1939 days	1426.7
TCGA-5C-AAPD-01A	61 years, male, asian, stage:ii, alive, 20 days	1426.2
TCGA-DD-AAE4-01A	49 years, female, asian, stage:i, alive, 608 days	1363.7
TCGA-ZP-A9D0-01A	67 years, female, black or african american, alive, 1091 days	1330.8
TCGA-MR-A520-01A	58 years, male, white, stage:i, alive, 229 days	1327.2
TCGA-BC-A10R-01A	66 years, female, white, dead, 308 days	1298.8
TCGA-DD-AACO-01A	40 years, male, asian, stage:i, alive, 1876 days	1261.0
TCGA-DD-A1EJ-01A	71 years, female, white, stage:iiic, dead, 1005 days	1200.9
TCGA-NI-A4U2-01A	71 years, male, white, stage:iiia, dead, 1791 days	1134.0
TCGA-DD-A11D-01A	57 years, female, white, stage:i, dead, 1560 days	1132.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:i, alive, 799 days	1125.4
TCGA-UB-A7MB-01A	24 years, male, white, stage:ii, alive, 601 days	1089.0
TCGA-DD-AAD8-01A	73 years, female, asian, stage:i, alive, 1219 days	1073.9
TCGA-DD-A11B-01A	73 years, male, white, stage:i, dead, 14 days	1073.5
TCGA-DD-AAVW-01A	35 years, male, asian, stage:i, alive, 2317 days	1064.8
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:ii, dead, 848 days	1064.1
TCGA-BC-A10W-01A	50 years, male, asian, dead, 91 days	1044.5
TCGA-2Y-A9H7-01A	81 years, female, white, stage:i, alive, 1168 days	1037.0
TCGA-ED-A8O5-01A	59 years, female, asian, stage:iiia, alive, 406 days	987.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:i, alive, 2015 days	987.0
TCGA-G3-AAV2-01A	50 years, male, white, stage:i, alive, 372 days	971.4
TCGA-BC-A3KF-01A	66 years, female, white, stage:i, alive, 8 days	966.9
TCGA-DD-AACS-01A	39 years, male, asian, stage:i, alive, 1804 days	956.7
TCGA-DD-AAVV-01A	56 years, male, asian, stage:ii, alive, 2455 days	955.4
TCGA-CC-A9FS-01A	55 years, male, asian, stage:ii, alive, 211 days	942.6
TCGA-HP-A5N0-01A	88 years, female, dead, 1147 days	932.9
TCGA-G3-A3CH-01A	53 years, male, asian, stage:iiia, alive, 780 days	921.1
TCGA-DD-A1EB-01A	72 years, female, stage:i, alive, 2017 days	910.4
TCGA-DD-A73B-01A	72 years, female, white, stage:i, dead, 283 days	908.2
TCGA-UB-A7MF-01A	57 years, male, white, stage:iiia, dead, 214 days	895.7
TCGA-CC-A8HS-01A	18 years, male, asian, stage:iiic, dead, 300 days	893.8
TCGA-ED-A4XI-01A	58 years, male, asian, stage:ii, alive, 819 days	877.9
TCGA-DD-AAE2-01A	51 years, male, asian, stage:i, alive, 638 days	876.8
TCGA-DD-AADA-01A	66 years, female, asian, stage:i, alive, 1233 days	866.9
TCGA-DD-AACK-01A	70 years, male, asian, stage:i, alive, 9 days	861.2
TCGA-DD-AADP-01A	45 years, male, asian, stage:i, alive, 458 days	851.8
TCGA-DD-AACG-01A	52 years, male, asian, stage:ii, dead, 469 days	842.7
TCGA-XR-A8TF-01A	74 years, male, white, stage:i, dead, 693 days	826.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:iiia, alive, 2398 days	807.7
TCGA-XR-A8TC-01A	43 years, female, white, stage:i, alive, 1339 days	798.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:i, alive, 729 days	783.1
TCGA-ED-A7XO-01A	29 years, male, asian, stage:iiia, alive, 427 days	760.4
TCGA-G3-A5SL-01A	70 years, male, white, stage:ii, alive, 621 days	757.3
TCGA-DD-AADR-01A	58 years, male, asian, stage:i, alive, 2028 days	752.5
TCGA-K7-A5RF-01A	64 years, male, white, stage:i, alive, 631 days	747.8
TCGA-DD-AADJ-01A	70 years, female, asian, stage:i, alive, 1066 days	741.1
TCGA-DD-AACH-01A	69 years, male, asian, stage:ii, dead, 195 days	740.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:i, alive, 2513 days	737.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:i, alive, 644 days	726.1
TCGA-ZS-A9CG-01A	55 years, male, white, stage:ii, alive, 341 days	715.3
TCGA-FV-A496-01A	84 years, female, white, stage:i, alive, 10 days	714.6
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:i, alive, 1452 days	705.6
TCGA-DD-AAEE-01A	55 years, male, asian, stage:i, alive, 810 days	701.9
TCGA-RC-A7SB-01A	53 years, male, asian, stage:ii, alive, 588 days	698.0
TCGA-WX-AA46-01A	62 years, male, white, stage:ii, alive, 756 days	697.7
TCGA-DD-AACE-01A	62 years, male, asian, stage:i, alive, 2184 days	694.6
TCGA-DD-AACV-01A	53 years, male, asian, stage:i, alive, 1531 days	692.9
TCGA-DD-AADK-01A	68 years, female, asian, stage:ii, alive, 1049 days	687.8
TCGA-UB-AA0V-01A	69 years, female, white, stage:i, alive, 314 days	685.8
TCGA-DD-AAEG-01A	59 years, female, asian, stage:i, alive, 719 days	685.0
TCGA-BC-A10X-01A	52 years, female, white, stage:iiia, dead, 770 days	684.7
TCGA-KR-A7K8-01A	57 years, male, stage:i, alive, 906 days	682.4
TCGA-DD-AAVP-01A	48 years, male, asian, stage:i, alive, 2752 days	679.9
TCGA-BC-A217-01A	75 years, female, white, stage:ii, dead, 1397 days	669.1
TCGA-DD-AACY-01A	61 years, male, asian, stage:i, alive, 1450 days	669.1
TCGA-ZP-A9CZ-01A	72 years, male, asian, alive, 706 days	665.4
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:i, alive, 1900 days	663.6
TCGA-BC-A10T-01A	76 years, male, white, dead, 837 days	658.2
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:ii, alive, 94 days	654.5
TCGA-DD-AAD3-01A	43 years, male, asian, stage:i, alive, 1295 days	652.8
TCGA-DD-A4NK-01A	80 years, female, white, stage:iiia, dead, 1210 days	646.1
TCGA-BD-A3ER-01A	62 years, male, white, stage:ii, alive, 1115 days	643.2
TCGA-G3-A5SI-01A	44 years, male, asian, stage:ii, dead, 768 days	640.5
TCGA-G3-A25Z-01A	58 years, male, asian, stage:i, alive, 655 days	630.8
TCGA-4R-AA8I-01A	66 years, male, white, stage:ii, dead, 262 days	626.4
TCGA-DD-AADV-01A	50 years, male, asian, stage:i, alive, 574 days	625.8
TCGA-DD-AAEB-01A	60 years, male, asian, stage:i, alive, 478 days	617.4
TCGA-2Y-A9H6-01A	68 years, female, white, stage:i, alive, 357 days	610.3
TCGA-CC-A7IH-01A	58 years, male, asian, stage:iiia, alive, 365 days	608.9
TCGA-DD-AACQ-01A	50 years, male, asian, stage:ii, dead, 432 days	607.5
TCGA-DD-A1EH-01A	23 years, male, white, stage:iii, alive, 1495 days	605.6
TCGA-DD-AAEH-01A	73 years, male, asian, stage:i, alive, 784 days	593.4
TCGA-DD-A73D-01A	68 years, female, white, stage:ii, alive, 693 days	587.3
TCGA-DD-AADD-01A	51 years, male, asian, stage:i, alive, 1231 days	581.2
TCGA-G3-AAV0-01A	58 years, male, asian, stage:i, alive, 476 days	578.7
TCGA-2Y-A9H9-01A	70 years, male, white, stage:i, alive, 697 days	568.7
TCGA-DD-A4NF-01A	72 years, male, white, stage:i, alive, 942 days	568.4
TCGA-BC-A216-01A	62 years, female, white, stage:iiia, alive, 1351 days	566.9
TCGA-ED-A7PY-01A	20 years, female, asian, stage:ii, alive, 390 days	559.8
TCGA-DD-AAE1-01A	52 years, male, asian, stage:i, alive, 552 days	552.6
TCGA-UB-AA0U-01A	60 years, male, white, stage:ii, alive, 327 days	550.5
TCGA-DD-A39W-01A	29 years, female, white, stage:iii, dead, 827 days	550.0
TCGA-DD-AADL-01A	58 years, male, asian, stage:i, alive, 636 days	548.2
TCGA-ZP-A9D2-01A	51 years, male, white, dead, 765 days	545.7
TCGA-G3-A7M5-01A	76 years, male, asian, stage:i, alive, 447 days	544.1
TCGA-FV-A3R3-01A	38 years, female, white, stage:i, dead, 366 days	543.8
TCGA-G3-AAUZ-01A	48 years, male, stage:i, alive, 480 days	543.7
TCGA-G3-A7M8-01A	31 years, male, asian, stage:i, alive, 430 days	543.2
TCGA-ZS-A9CF-01A	64 years, male, white, stage:ii, alive, 2412 days	542.6
TCGA-DD-AADG-01A	70 years, male, asian, stage:iiia, alive, 1145 days	542.3
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:iiia, alive, 20 days	533.3
TCGA-CC-A7IF-01A	59 years, male, asian, stage:iiia, dead, 649 days	530.4
TCGA-FV-A23B-01A	70 years, female, white, stage:ii, dead, 1852 days	530.3
TCGA-RC-A6M5-01A	20 years, female, white, stage:iva, alive, 15 days	525.3
TCGA-CC-5264-01A	71 years, male, asian, stage:iiia, dead, 102 days	520.7
TCGA-2Y-A9HB-01A	66 years, male, stage:i, alive, 260 days	519.1
TCGA-ED-A459-01A	47 years, male, asian, stage:ii, alive, 910 days	514.1
TCGA-DD-AAE6-01A	59 years, female, asian, stage:i, alive, 141 days	512.7
TCGA-5R-AAAM-01A	65 years, female, white, stage:ii, dead, 46 days	510.9
TCGA-G3-AAV4-01A	83 years, female, white, stage:i, dead, 27 days	510.4
TCGA-DD-AACC-01A	61 years, male, asian, stage:i, dead, 1685 days	509.7
TCGA-DD-A1EK-01A	64 years, female, white, stage:ivb, dead, 558 days	508.7
TCGA-2Y-A9GT-01A	51 years, male, white, stage:i, dead, 1624 days	504.8
TCGA-BD-A2L6-01A	69 years, male, white, alive, 1363 days	504.6
TCGA-ZP-A9CY-01A	66 years, female, white, alive, 782 days	502.5
TCGA-EP-A2KB-01A	46 years, female, white, stage:i, dead, 596 days	501.7
TCGA-DD-AACI-01A	69 years, male, asian, stage:ii, alive, 1618 days	500.8
TCGA-CC-A8HU-01A	39 years, female, asian, stage:iiia, dead, 344 days	500.4
TCGA-DD-AACF-01A	68 years, male, asian, stage:i, dead, 365 days	488.8
TCGA-DD-AAEA-01A	65 years, male, asian, stage:i, alive, 575 days	485.4
TCGA-DD-AADF-01A	64 years, female, asian, stage:i, dead, 115 days	484.7
TCGA-LG-A6GG-01A	79 years, female, white, stage:ii, alive, 387 days	484.0
TCGA-DD-A73A-01A	71 years, male, white, stage:i, alive, 728 days	482.3
TCGA-BC-A110-01A	51 years, female, black or african american, dead, 2116 days	481.7
TCGA-ZS-A9CE-01A	79 years, female, white, stage:ii, alive, 1241 days	476.3
TCGA-ED-A66X-01A	35 years, male, asian, stage:iiia, alive, 406 days	475.3
TCGA-DD-AAE9-01A	69 years, male, asian, stage:i, alive, 722 days	473.9
TCGA-DD-AAEI-01A	72 years, male, asian, stage:i, alive, 1531 days	473.2
TCGA-DD-A73E-01A	66 years, male, white, stage:i, alive, 44 days	471.9
TCGA-2Y-A9H3-01A	45 years, male, white, stage:ii, alive, 1516 days	470.4
TCGA-DD-A11C-01A	69 years, male, white, stage:i, alive, 662 days	469.5
TCGA-DD-A4NB-01A	25 years, male, white, stage:i, alive, 989 days	463.7
TCGA-RC-A7S9-01A	47 years, female, asian, stage:i, alive, 640 days	461.1
TCGA-BC-A10S-01A	81 years, male, white, dead, 1423 days	460.2
TCGA-DD-AAVU-01A	46 years, male, asian, stage:ii, alive, 2202 days	456.3
TCGA-BC-A5W4-01A	69 years, male, white, stage:iiia, dead, 547 days	456.1
TCGA-DD-AACT-01A	69 years, female, asian, stage:i, alive, 1562 days	455.2
TCGA-UB-A7ME-01A	51 years, male, asian, stage:i, alive, 486 days	455.0
TCGA-RC-A7SF-01A	66 years, male, asian, stage:i, alive, 579 days	452.7
TCGA-ED-A627-01A	74 years, male, white, stage:i, alive, 423 days	448.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:i, alive, 183 days	444.5
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:ii, alive, 6 days	443.8
TCGA-DD-AAC9-01A	51 years, male, asian, stage:i, alive, 347 days	442.8
TCGA-DD-AAVS-01A	56 years, male, asian, stage:i, alive, 1823 days	442.2
TCGA-CC-A3MC-01A	54 years, male, asian, stage:iiia, alive, 363 days	437.3
TCGA-2Y-A9GV-01A	54 years, female, white, stage:i, dead, 2532 days	436.9
TCGA-DD-A4NE-01A	75 years, female, white, stage:iiia, dead, 660 days	436.3
TCGA-GJ-A9DB-01A	68 years, male, white, stage:i, dead, 67 days	436.2
TCGA-DD-A118-01A	77 years, female, white, stage:ii, alive, 3437 days	436.1
TCGA-FV-A495-01A	51 years, female, white, stage:ii, alive, 1 days	434.1
TCGA-DD-A4NL-01A	46 years, male, white, stage:i, alive, 1711 days	427.8
TCGA-ZP-A9D1-01A	56 years, female, white, alive, 21 days	419.2
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:i, alive, 519 days	417.9
TCGA-DD-A4NJ-01A	54 years, female, white, stage:ii, alive, 928 days	415.5
TCGA-DD-A4NI-01A	67 years, male, white, stage:ii, alive, 816 days	414.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:i, alive, 673 days	413.1
TCGA-CC-A7IK-01A	59 years, male, asian, stage:iiia, dead, 262 days	409.9
TCGA-FV-A3I1-01A	female, white, stage:ii, dead, 247 days	406.8
TCGA-G3-A6UC-01A	65 years, male, white, stage:iiib, alive, 671 days	404.3
TCGA-DD-A1EA-01A	68 years, male, asian, stage:ii, alive, 2415 days	395.8
TCGA-DD-A115-01A	53 years, male, white, stage:iiia, dead, 2542 days	388.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:i, alive, 472 days	384.4
TCGA-CC-A7IL-01A	61 years, male, asian, stage:iiia, dead, 278 days	384.4
TCGA-XR-A8TD-01A	49 years, female, white, stage:iiib, alive, 1030 days	382.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:i, alive, 1855 days	380.1
TCGA-2Y-A9GS-01A	58 years, male, white, dead, 724 days	379.2
TCGA-DD-AACW-01A	43 years, male, asian, stage:i, alive, 1424 days	378.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:i, alive, 2746 days	377.0
TCGA-DD-A4NQ-01A	60 years, male, white, stage:ii, dead, 373 days	375.8
TCGA-DD-AADB-01A	51 years, male, asian, stage:i, alive, 1242 days	367.1
TCGA-BC-A10Y-01A	76 years, male, white, dead, 711 days	366.8
TCGA-DD-AADM-01A	58 years, male, asian, stage:ii, dead, 12 days	361.3
TCGA-DD-AACN-01A	32 years, male, asian, stage:i, alive, 1302 days	358.3
TCGA-DD-AADS-01A	63 years, male, asian, stage:i, alive, 474 days	354.0
TCGA-O8-A75V-01A	54 years, male, stage:i, alive, 538 days	353.6
TCGA-2Y-A9HA-01A	70 years, male, white, stage:ii, dead, 36 days	348.9
TCGA-DD-A73F-01A	77 years, female, white, stage:i, alive, 1085 days	348.0
TCGA-LG-A9QD-01A	68 years, male, white, stage:iiia, alive, 366 days	343.4
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:iiib, alive, 396 days	342.1
TCGA-RC-A6M4-01A	74 years, female, white, stage:iiia, alive, 22 days	342.0
TCGA-XR-A8TG-01A	59 years, male, white, stage:i, alive, 898 days	341.9
TCGA-DD-A73G-01A	73 years, female, white, stage:i, alive, 3478 days	341.2
TCGA-UB-A7MC-01A	59 years, male, white, stage:iiia, alive, 500 days	340.6
TCGA-DD-A3A1-01A	65 years, male, stage:iiia, dead, 233 days	337.7
TCGA-ZP-A9CV-01A	59 years, male, white, dead, 1088 days	333.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:ivb, dead, 931 days	332.5
TCGA-CC-A3MB-01A	36 years, male, asian, stage:iiia, dead, 315 days	330.6
TCGA-5R-AA1C-01A	57 years, male, white, stage:ii, alive, 520 days	329.1
TCGA-DD-AACU-01A	59 years, male, asian, stage:i, alive, 1567 days	327.5
TCGA-2Y-A9H8-01A	85 years, female, white, dead, 633 days	326.5
TCGA-PD-A5DF-01A	58 years, female, white, stage:iiib, dead, 639 days	325.4
TCGA-DD-AADI-01A	43 years, female, asian, stage:i, alive, 1085 days	317.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:iiia, alive, 3675 days	315.8
TCGA-BC-A69I-01A	69 years, male, white, stage:i, alive, 387 days	314.2
TCGA-DD-A4NS-01A	62 years, female, white, stage:i, dead, 2456 days	314.1
TCGA-DD-A4NP-01A	32 years, male, white, stage:i, alive, 3308 days	313.7
TCGA-5R-AA1D-01A	17 years, female, white, stage:iiia, alive, 449 days	313.6
TCGA-G3-A7M9-01A	70 years, male, white, stage:iiib, dead, 56 days	311.5
TCGA-ZS-A9CD-01A	73 years, male, white, stage:ii, dead, 1386 days	311.3
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:i, alive, 2728 days	309.8
TCGA-DD-AAEK-01A	51 years, male, asian, stage:ii, alive, 1067 days	306.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:i, dead, 555 days	306.2
TCGA-BC-A8YO-01A	66 years, female, white, stage:iiic, alive, 562 days	305.4
TCGA-DD-A3A5-01A	66 years, female, white, stage:iii, dead, 3125 days	302.5
TCGA-G3-AAV1-01A	51 years, male, asian, stage:iiic, dead, 359 days	302.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:i, alive, 566 days	300.7
TCGA-CC-5263-01A	35 years, male, asian, stage:iiia, dead, 129 days	300.7
TCGA-KR-A7K2-01A	64 years, male, white, stage:i, alive, 829 days	300.5
TCGA-DD-A39X-01A	78 years, female, white, stage:i, dead, 1694 days	292.8
TCGA-ED-A7XP-01A	53 years, female, asian, stage:ii, alive, 400 days	292.3
TCGA-G3-A5SM-01A	58 years, male, white, stage:ii, alive, 520 days	291.4
TCGA-G3-A25V-01A	68 years, male, white, stage:i, alive, 860 days	290.9
TCGA-T1-A6J8-01A	68 years, male, white, alive, 23 days	290.8
TCGA-DD-AACJ-01A	75 years, male, asian, stage:ii, alive, 2102 days	290.3
TCGA-BC-A3KG-01A	68 years, female, white, stage:ii, alive, 680 days	289.1
TCGA-BD-A3EP-01A	76 years, female, black or african american, stage:i, alive, 409 days	288.5
TCGA-HP-A5MZ-01A	62 years, male, stage:i, dead, 91 days	282.9
TCGA-DD-A4NO-01A	66 years, male, white, stage:i, alive, 2245 days	282.3
TCGA-DD-AAD2-01A	66 years, male, asian, stage:i, alive, 658 days	279.0
TCGA-EP-A3JL-01A	76 years, male, white, stage:i, alive, 303 days	276.1
TCGA-MI-A75G-01A	63 years, male, white, stage:ii, alive, 698 days	274.5
TCGA-WX-AA44-01A	64 years, female, white, stage:i, alive, 615 days	274.4
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:ii, alive, 1098 days	272.5
TCGA-ED-A8O6-01A	50 years, female, asian, stage:iiia, dead, 56 days	268.6
TCGA-2Y-A9GX-01A	68 years, male, white, stage:i, alive, 2442 days	267.9
TCGA-BC-4073-01B	73 years, male, white, stage:iiia, alive, 849 days	267.6
TCGA-DD-AADU-01A	60 years, male, asian, stage:ii, alive, 554 days	267.3
TCGA-DD-AADW-01A	48 years, male, asian, stage:i, alive, 587 days	266.7
TCGA-K7-A6G5-01A	66 years, male, white, stage:i, alive, 512 days	265.8
TCGA-CC-5261-01A	44 years, male, asian, stage:ii, dead, 97 days	265.1
TCGA-CC-A8HV-01A	51 years, female, asian, stage:ii, dead, 279 days	264.1
TCGA-DD-A1ED-01A	68 years, male, white, stage:i, alive, 2301 days	261.2
TCGA-DD-A3A7-01A	67 years, male, stage:iiib, dead, 419 days	258.3
TCGA-ES-A2HS-01A	80 years, male, white, stage:i, dead, 688 days	257.2
TCGA-MI-A75I-01A	61 years, male, black or african american, alive, 630 days	256.7
TCGA-FV-A3R2-01A	75 years, male, white, stage:i, dead, 194 days	254.8
TCGA-G3-A5SJ-01A	59 years, male, white, stage:i, alive, 698 days	254.1
TCGA-MR-A8JO-01A	34 years, male, white, stage:i, alive, 330 days	252.4
TCGA-DD-A3A8-01A	75 years, male, white, stage:ii, dead, 11 days	252.4
TCGA-XR-A8TE-01A	16 years, male, white, stage:iiia, alive, 925 days	245.0
TCGA-ZP-A9D4-01A	64 years, female, white, alive, 395 days	243.7
TCGA-2Y-A9H1-01A	58 years, male, white, stage:i, dead, 1229 days	243.7
TCGA-G3-A25Y-01A	52 years, female, asian, stage:i, dead, 452 days	242.9
TCGA-CC-A123-01A	24 years, female, asian, stage:iiia, alive, 219 days	241.2
TCGA-G3-A3CK-01A	61 years, male, asian, stage:i, alive, 585 days	240.5
TCGA-G3-AAV3-01A	58 years, female, white, stage:ii, alive, 412 days	238.9
TCGA-CC-A5UE-01A	48 years, male, asian, stage:iiib, dead, 272 days	238.7
TCGA-BC-A10Z-01A	62 years, female, white, stage:i, dead, 34 days	238.0
TCGA-FV-A2QR-01A	male, white, stage:i, dead, 581 days	236.9
TCGA-ED-A66Y-01A	51 years, female, asian, stage:iiia, dead, 296 days	234.4
TCGA-DD-A3A4-01A	37 years, male, white, stage:iiia, dead, 612 days	233.5
TCGA-DD-AAD0-01A	73 years, female, asian, stage:i, alive, 137 days	233.1
TCGA-MI-A75E-01A	61 years, male, white, stage:iiic, alive, 507 days	232.9
TCGA-BC-A112-01A	80 years, male, white, dead, 153 days	231.4
TCGA-DD-AAED-01A	51 years, male, asian, stage:i, alive, 763 days	228.4
TCGA-WJ-A86L-01A	68 years, female, white, stage:i, alive, 345 days	228.3
TCGA-DD-AAD1-01A	51 years, female, asian, stage:i, alive, 564 days	225.4
TCGA-EP-A26S-01A	70 years, male, white, stage:i, alive, 608 days	220.2
TCGA-GJ-A6C0-01A	75 years, female, white, stage:ii, dead, 31 days	211.8
TCGA-CC-5259-01A	60 years, female, asian, stage:iiic, alive, 250 days	209.0
TCGA-CC-A7IE-01A	57 years, male, asian, stage:iiia, dead, 217 days	207.6
TCGA-DD-A119-01A	40 years, male, asian, stage:iv, dead, 223 days	203.3
TCGA-UB-A7MA-01A	62 years, female, white, stage:ii, alive, 848 days	202.9
TCGA-DD-A116-01A	68 years, male, asian, stage:iiia, dead, 1622 days	201.2
TCGA-FV-A4ZP-01A	78 years, male, white, stage:iiia, dead, 2486 days	200.6
TCGA-CC-5262-01A	67 years, male, asian, stage:iiic, dead, 103 days	197.2
TCGA-DD-AACL-01A	66 years, female, asian, stage:i, dead, 107 days	197.0
TCGA-KR-A7K0-01A	65 years, male, white, stage:i, dead, 65 days	192.4
TCGA-CC-A7IG-01A	47 years, male, asian, stage:ii, dead, 299 days	190.0
TCGA-G3-A25S-01A	64 years, male, white, stage:i, dead, 416 days	189.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:i, alive, 879 days	188.5
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:i, dead, 438 days	187.9
TCGA-DD-AAW3-01A	69 years, male, asian, stage:i, alive, 1633 days	187.9
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:i, dead, 19 days	187.8
TCGA-MI-A75H-01A	77 years, male, white, alive, 747 days	184.7
TCGA-G3-A7M7-01A	65 years, male, white, stage:i, alive, 361 days	180.3
TCGA-DD-AACZ-01A	63 years, female, asian, stage:i, dead, 171 days	179.0
TCGA-DD-AAD6-01A	66 years, male, asian, stage:iiia, alive, 672 days	179.0
TCGA-DD-A39Y-01A	67 years, male, asian, stage:i, dead, 171 days	178.2
TCGA-WQ-AB4B-01A	62 years, male, white, stage:ii, alive, 395 days	175.8
TCGA-EP-A12J-01A	63 years, male, black or african american, stage:i, alive, 570 days	174.6
TCGA-DD-AACX-01A	66 years, male, asian, stage:ii, alive, 170 days	171.4
TCGA-DD-A1EG-01A	77 years, male, white, stage:i, dead, 1372 days	170.1
TCGA-DD-AACD-01A	48 years, male, asian, stage:i, dead, 381 days	165.3
TCGA-5C-A9VH-01A	70 years, male, white, stage:i, alive, 322 days	164.0
TCGA-DD-AAW1-01A	55 years, male, asian, stage:iiia, alive, 1989 days	160.9
TCGA-EP-A3RK-01A	73 years, male, white, stage:iiia, alive, 363 days	160.9
TCGA-DD-AADQ-01A	59 years, male, asian, stage:ii, alive, 436 days	160.5
TCGA-DD-A114-01A	42 years, male, black or african american, stage:ii, dead, 1149 days	159.0
TCGA-DD-A4NR-01A	85 years, female, white, stage:i, dead, 9 days	158.6
TCGA-DD-A1EF-01A	57 years, female, white, stage:i, dead, 394 days	153.5
TCGA-DD-A3A3-01A	45 years, male, asian, stage:i, dead, 535 days	153.3
TCGA-KR-A7K7-01A	61 years, female, white, stage:ii, alive, 951 days	152.9
TCGA-DD-AACP-01A	65 years, male, asian, stage:i, alive, 415 days	151.1
TCGA-5C-A9VG-01A	58 years, male, white, stage:ii, alive, 328 days	150.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:i, dead, 1271 days	150.3
TCGA-BC-A69H-01A	64 years, male, white, stage:ii, alive, 444 days	147.8
TCGA-DD-A4NN-01A	56 years, female, white, stage:i, dead, 899 days	143.3
TCGA-DD-AADN-01A	59 years, male, asian, stage:i, alive, 898 days	135.8
TCGA-CC-A5UC-01A	63 years, male, asian, stage:iiia, dead, 347 days	133.1
TCGA-EP-A2KA-01A	52 years, female, white, stage:iiia, dead, 627 days	130.9
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:ii, dead, 415 days	129.8
TCGA-G3-A7M6-01A	60 years, female, white, stage:i, alive, 632 days	127.0
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:i, dead, 52 days	126.9
TCGA-RC-A7SH-01A	42 years, male, asian, stage:ii, alive, 468 days	125.3
TCGA-CC-5258-01A	48 years, male, asian, stage:ii, dead, 129 days	121.9
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:ii, alive, 594 days	118.0
TCGA-DD-AACA-01A	65 years, male, asian, stage:i, alive, 2301 days	117.4
TCGA-DD-AAVY-01A	56 years, male, asian, stage:iiia, alive, 1970 days	114.1
TCGA-DD-A4NG-01A	77 years, male, white, stage:iiia, dead, 802 days	114.0
TCGA-BC-4072-01B	74 years, female, white, stage:iiia, dead, 1490 days	112.7
TCGA-BC-A10U-01A	69 years, male, white, dead, 837 days	110.5
TCGA-G3-A25X-01A	73 years, male, asian, stage:ii, alive, 1779 days	109.9
TCGA-DD-AADC-01A	53 years, male, asian, stage:i, dead, 425 days	107.4
TCGA-DD-AADO-01A	55 years, male, asian, stage:i, alive, 453 days	102.7
TCGA-K7-AAU7-01A	61 years, male, white, stage:ii, alive, 359 days	102.5
TCGA-DD-A39Z-01A	43 years, female, stage:ii, dead, 601 days	99.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:ii, dead, 757 days	95.4
TCGA-LG-A9QC-01A	48 years, male, white, stage:i, alive, 425 days	91.9
TCGA-G3-AAV6-01A	53 years, female, white, stage:iiia, dead, 65 days	84.7
TCGA-WX-AA47-01A	33 years, female, white, stage:iiia, dead, 556 days	78.9
TCGA-ED-A97K-01A	54 years, male, asian, stage:iiia, alive, 6 days	78.7
TCGA-DD-A1EC-01A	20 years, female, white, stage:i, alive, 602 days	78.7
TCGA-CC-A9FW-01A	68 years, male, asian, stage:iiia, alive, 248 days	71.5
TCGA-DD-AAVX-01A	38 years, male, asian, stage:ii, alive, 1570 days	69.4
TCGA-2Y-A9H2-01A	64 years, female, white, stage:i, alive, 1731 days	68.3
TCGA-G3-AAV5-01A	67 years, male, white, stage:ii, alive, 354 days	66.8
TCGA-G3-AAV7-01A	38 years, male, asian, stage:ii, alive, 361 days	65.2
TCGA-WQ-A9G7-01A	female, white, alive, 30 days	65.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:i, alive, 1345 days	51.7
TCGA-ED-A5KG-01A	60 years, female, asian, stage:ii, alive, 854 days	48.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:iiia, dead, 140 days	45.7
TCGA-DD-A4NH-01A	65 years, female, white, stage:iiib, alive, 917 days	38.3
TCGA-CC-A3MA-01A	61 years, male, asian, stage:iiia, dead, 303 days	38.2
TCGA-DD-A39V-01A	77 years, male, white, stage:ii, dead, 643 days	38.1
TCGA-CC-A5UD-01A	45 years, male, asian, stage:iiia, dead, 304 days	35.5
TCGA-RC-A6M6-01A	75 years, male, white, stage:ii, alive, 9 days	34.9
TCGA-G3-A25T-01A	45 years, female, white, stage:iiia, alive, 1553 days	34.5
TCGA-DD-AACB-01A	74 years, female, asian, stage:i, alive, 2324 days	31.1
TCGA-YA-A8S7-01A	69 years, male, white, stage:iiia, dead, 412 days	30.2
TCGA-DD-AAE0-01A	45 years, female, asian, stage:iiia, alive, 555 days	29.3
TCGA-DD-A1EE-01A	73 years, male, white, stage:iiia, dead, 349 days	29.1
TCGA-MI-A75C-01A	64 years, male, white, stage:i, alive, 291 days	26.3
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:i, alive, 12 days	21.8
TCGA-CC-A7II-01A	55 years, male, asian, stage:iiia, alive, 399 days	16.8
TCGA-DD-A4NA-01A	67 years, female, white, stage:iiic, alive, 1008 days	7.7
TCGA-DD-AA3A-01A	81 years, female, white, stage:i, dead, 410 days	6.0
TCGA-CC-A1HT-01A	50 years, male, asian, stage:iiia, dead, 101 days	5.5
TCGA-BC-A10Q-01A	72 years, female, white, dead, 1135 days	5.0
TCGA-ED-A7PX-01A	48 years, female, asian, stage:ii, alive, 6 days	4.9
TCGA-FV-A3I0-01A	76 years, female, white, stage:ii, alive, 848 days	1.1
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:ii, alive, 382 days	0.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:ii, dead, 3258 days	0.6
TCGA-CC-5260-01A	61 years, female, asian, stage:iiic, dead, 87 days	0.5
TCGA-ED-A82E-01A	60 years, female, asian, stage:iiia, alive, 408 days	0.4
TCGA-DD-AAC8-01A	72 years, male, asian, stage:i, dead, 16 days	0.4
TCGA-CC-A3M9-01A	45 years, male, asian, stage:iiia, dead, 300 days	0.2
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells. Read more	Antibody HPA027423	Antibody HPA027442	Antibody CAB032906
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Click images for details