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OVARIAN CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
973.5
Number of samples
373
Samples
Sample
Description
FPKM
TCGA-25-2393-01A
81 years, female, white, dead, 1157 days
4662.1
TCGA-04-1542-01A
52 years, female, white, dead, 2561 days
3810.1
TCGA-24-0966-01A
78 years, female, black or african american, alive, 232 days
3017.0
TCGA-30-1853-01A
58 years, female, white, dead, 1103 days
2776.0
TCGA-13-0762-01A
65 years, female, white, alive, 3400 days
2576.7
TCGA-09-1659-01B
51 years, female, white, dead, 304 days
2444.2
TCGA-23-1021-01B
45 years, female, white, dead, 1446 days
2422.8
TCGA-10-0931-01A
44 years, female, white, dead, 1000 days
2359.7
TCGA-04-1347-01A
81 years, female, white, alive, 1919 days
2292.8
TCGA-10-0927-01A
65 years, female, dead, 2490 days
2245.7
TCGA-13-1409-01A
73 years, female, white, dead, 1742 days
2184.8
TCGA-61-2092-01A
57 years, female, white, alive, 1573 days
2153.9
TCGA-13-0804-01A
74 years, female, white, dead, 1073 days
2147.3
TCGA-09-0364-01A
80 years, female, white, dead, 887 days
2066.9
TCGA-29-1703-01A
56 years, female, black or african american, dead, 1815 days
2010.2
TCGA-25-2396-01A
71 years, female, white, dead, 92 days
2009.2
TCGA-23-1022-01A
67 years, female, white, dead, 1511 days
1999.9
TCGA-23-1027-01A
48 years, female, white, dead, 976 days
1994.7
TCGA-61-2002-01A
46 years, female, white, alive, 547 days
1979.3
TCGA-24-1431-01A
67 years, female, white, dead, 567 days
1971.1
TCGA-24-2038-01A
68 years, female, white, dead, 1354 days
1961.4
TCGA-04-1350-01A
46 years, female, white, dead, 1946 days
1923.3
TCGA-30-1891-01A
61 years, female, white, dead, 914 days
1914.5
TCGA-09-1661-01B
75 years, female, white, dead, 1169 days
1877.4
TCGA-29-2425-01A
60 years, female, white, alive, 1977 days
1861.3
TCGA-13-0901-01B
42 years, female, asian, alive, 589 days
1842.4
TCGA-23-1107-01A
59 years, female, white, dead, 9 days
1834.0
TCGA-61-2101-01A
55 years, female, white, dead, 1688 days
1831.0
TCGA-23-1024-01A
52 years, female, white, alive, 468 days
1811.8
TCGA-25-1634-01A
76 years, female, white, dead, 1091 days
1805.2
TCGA-23-1026-01B
45 years, female, white, alive, 816 days
1800.8
TCGA-13-0724-01A
72 years, female, white, dead, 83 days
1799.8
TCGA-04-1341-01A
85 years, female, white, alive, 33 days
1771.5
TCGA-04-1519-01A
48 years, female, alive, 24 days
1750.0
TCGA-13-1510-01A
62 years, female, white, dead, 1359 days
1736.5
TCGA-13-1477-01A
49 years, female, white, dead, 1662 days
1725.4
TCGA-13-1404-01A
48 years, female, white, alive, 2469 days
1691.8
TCGA-24-1471-01A
60 years, female, white, alive, 36 days
1685.3
TCGA-24-2033-01A
87 years, female, white, dead, 562 days
1659.8
TCGA-25-1632-01A
68 years, female, white, dead, 1799 days
1654.2
TCGA-24-1616-01A
56 years, female, white, dead, 1163 days
1632.0
TCGA-13-0900-01B
59 years, female, white, alive, 4077 days
1624.9
TCGA-09-2056-01B
62 years, female, white, alive, 379 days
1620.3
TCGA-13-0714-01A
55 years, female, white, dead, 189 days
1603.0
TCGA-10-0938-01A
80 years, female, white, dead, 636 days
1591.6
TCGA-29-1784-01A
55 years, female, white, alive, 163 days
1579.4
TCGA-04-1655-01A
49 years, female, white, dead, 1380 days
1555.8
TCGA-24-1553-01A
53 years, female, white, dead, 1767 days
1554.6
TCGA-25-1328-01A
38 years, female, white, dead, 2009 days
1545.0
TCGA-24-1464-01A
70 years, female, white, dead, 379 days
1544.7
TCGA-04-1651-01A
53 years, female, white, dead, 1102 days
1539.8
TCGA-61-1728-01A
59 years, female, white, alive, 848 days
1534.4
TCGA-57-1583-01A
57 years, female, black or african american, dead, 346 days
1523.1
TCGA-09-1662-01A
58 years, female, white, dead, 2717 days
1515.6
TCGA-13-0725-01A
44 years, female, white, dead, 377 days
1504.9
TCGA-20-1682-01A
56 years, female, white, alive, 837 days
1498.3
TCGA-10-0936-01A
69 years, female, black or african american, dead, 1123 days
1473.8
TCGA-13-0885-01A
70 years, female, white, alive, 3388 days
1441.4
TCGA-23-1113-01A
48 years, female, white, dead, 949 days
1437.6
TCGA-25-1316-01A
55 years, female, white, dead, 1279 days
1429.2
TCGA-20-1687-01A
46 years, female, white, alive, 81 days
1424.0
TCGA-13-1506-01A
45 years, female, white, dead, 1039 days
1415.2
TCGA-13-0765-01A
50 years, female, white, dead, 1389 days
1413.5
TCGA-04-1343-01A
72 years, female, white, dead, 361 days
1405.7
TCGA-20-0991-01A
78 years, female, white, alive, 797 days
1391.7
TCGA-20-0987-01A
61 years, female, white, dead, 701 days
1382.9
TCGA-29-1768-01A
50 years, female, white, dead, 952 days
1361.6
TCGA-29-2414-01A
75 years, female, white, dead, 2621 days
1360.0
TCGA-24-1103-01A
50 years, female, black or african american, dead, 1646 days
1357.4
TCGA-61-2110-01A
56 years, female, white, dead, 1354 days
1349.7
TCGA-24-1604-01A
67 years, female, white, dead, 2688 days
1335.3
TCGA-13-1505-01A
63 years, female, white, alive, 1998 days
1332.1
TCGA-36-1577-01A
43 years, female, asian, alive, 783 days
1326.1
TCGA-57-1582-01A
female, white, dead, 731 days
1308.9
TCGA-24-0982-01A
77 years, female, white, dead, 679 days
1304.5
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, dead, 547 days
1301.7
TCGA-57-1584-01A
47 years, female, white, alive, 643 days
1294.5
TCGA-13-1489-01A
70 years, female, white, dead, 2553 days
1281.4
TCGA-25-1631-01A
73 years, female, white, dead, 9 days
1276.8
TCGA-29-1761-01A
80 years, female, asian, dead, 528 days
1270.1
TCGA-24-1923-01A
51 years, female, white, dead, 690 days
1259.1
TCGA-24-1845-01A
42 years, female, white, alive, 116 days
1259.1
TCGA-13-1487-01A
74 years, female, white, dead, 681 days
1257.4
TCGA-24-1565-01A
74 years, female, white, dead, 312 days
1245.4
TCGA-61-2009-01A
65 years, female, white, alive, 1212 days
1238.6
TCGA-25-1321-01A
65 years, female, white, dead, 1033 days
1231.1
TCGA-24-1426-01A
43 years, female, white, alive, 163 days
1229.0
TCGA-61-2008-01A
40 years, female, asian, alive, 932 days
1226.4
TCGA-61-1721-01A
38 years, female, white, alive, 338 days
1223.3
TCGA-23-1030-01A
64 years, female, white, alive, 886 days
1220.9
TCGA-24-2024-01A
72 years, female, black or african american, dead, 1769 days
1220.5
TCGA-24-1544-01A
71 years, female, black or african american, dead, 820 days
1220.5
TCGA-25-1317-01A
66 years, female, white, dead, 61 days
1217.3
TCGA-29-1776-01A
63 years, female, black or african american, alive, 360 days
1195.4
TCGA-61-1919-01A
58 years, female, white, dead, 1161 days
1194.3
TCGA-13-0884-01B
39 years, female, white, dead, 3260 days
1191.4
TCGA-13-0920-01A
65 years, female, white, dead, 1484 days
1189.2
TCGA-25-1877-01A
81 years, female, white, dead, 730 days
1187.0
TCGA-24-1413-01A
51 years, female, white, alive, 192 days
1186.8
TCGA-13-0766-01A
42 years, female, white, dead, 1725 days
1178.7
TCGA-29-1770-01A
54 years, female, white, alive, 741 days
1161.0
TCGA-13-1408-01A
59 years, female, white, dead, 1680 days
1154.7
TCGA-29-1783-01A
58 years, female, white, alive, 220 days
1151.8
TCGA-09-1670-01A
57 years, female, white, alive, 547 days
1143.8
TCGA-24-1546-01A
46 years, female, white, dead, 1955 days
1141.5
TCGA-13-1509-01A
64 years, female, white, alive, 2438 days
1137.3
TCGA-04-1361-01A
57 years, female, white, alive, 989 days
1135.4
TCGA-13-0727-01A
71 years, female, white, dead, 462 days
1132.3
TCGA-13-1501-01A
50 years, female, white, dead, 1314 days
1122.4
TCGA-13-0888-01A
78 years, female, white, dead, 2811 days
1119.6
TCGA-24-2267-01A
58 years, female, white, dead, 1446 days
1110.4
TCGA-23-1023-01A
65 years, female, white, alive, 1233 days
1101.3
TCGA-29-1690-01A
66 years, female, white, dead, 1448 days
1098.8
TCGA-09-0369-01A
56 years, female, white, dead, 1082 days
1093.2
TCGA-59-2351-01A
female, white, alive, 3532 days
1087.8
TCGA-30-1714-01A
68 years, female, white, dead, 1158 days
1072.3
TCGA-09-2053-01C
72 years, female, white, alive, 1209 days
1067.0
TCGA-24-1467-01A
51 years, female, white, dead, 3224 days
1065.3
TCGA-36-1569-01A
52 years, female, white, alive, 885 days
1064.9
TCGA-13-0911-01A
55 years, female, white, dead, 1355 days
1061.5
TCGA-10-0928-01A
71 years, female, white, dead, 563 days
1045.7
TCGA-30-1862-01A
65 years, female, white, dead, 186 days
1041.3
TCGA-29-1769-01A
40 years, female, white, alive, 699 days
1037.0
TCGA-04-1364-01A
61 years, female, white, dead, 1024 days
1032.9
TCGA-24-1842-01A
49 years, female, white, alive, 253 days
1032.1
TCGA-24-2281-01A
68 years, female, white, alive, 1357 days
1031.5
TCGA-24-1551-01A
53 years, female, white, dead, 1579 days
1030.4
TCGA-30-1860-01A
58 years, female, white, dead, 1366 days
1016.1
TCGA-61-2000-01A
67 years, female, white, alive, 441 days
1015.9
TCGA-30-1892-01A
52 years, female, white, dead, 1484 days
1007.6
TCGA-13-0887-01A
42 years, female, white, dead, 2028 days
1004.9
TCGA-13-0795-01A
66 years, female, white, dead, 619 days
1002.3
TCGA-23-1110-01A
42 years, female, white, alive, 1658 days
1000.0
TCGA-59-2355-01A
female, white, dead, 65 days
997.4
TCGA-25-1870-01A
59 years, female, white, dead, 455 days
996.7
TCGA-13-0726-01A
55 years, female, white, dead, 949 days
995.1
TCGA-24-1428-01A
50 years, female, white, alive, 529 days
994.6
TCGA-13-0897-01A
54 years, female, white, dead, 2182 days
992.7
TCGA-10-0937-01A
44 years, female, white, dead, 608 days
988.3
TCGA-13-1407-01A
51 years, female, white, alive, 2534 days
986.7
TCGA-WR-A838-01A
72 years, female, black or african american, dead, 304 days
986.3
TCGA-13-0924-01A
45 years, female, white, alive, 2614 days
981.3
TCGA-61-2109-01A
40 years, female, white, dead, 629 days
967.8
TCGA-23-1109-01A
63 years, female, white, dead, 1562 days
964.3
TCGA-25-1630-01A
73 years, female, white, dead, 1162 days
962.6
TCGA-24-0979-01A
53 years, female, white, dead, 1264 days
960.6
TCGA-61-1736-01B
45 years, female, white, dead, 1484 days
959.1
TCGA-04-1365-01A
87 years, female, white, alive, 2329 days
954.5
TCGA-24-1562-01A
67 years, female, white, dead, 1384 days
952.6
TCGA-23-1118-01A
45 years, female, white, alive, 2616 days
946.8
TCGA-31-1956-01A
60 years, female, white, alive, 1342 days
942.3
TCGA-31-1959-01A
49 years, female, white, alive, 67 days
941.8
TCGA-24-1846-01A
45 years, female, alive, 133 days
941.4
TCGA-13-1499-01A
56 years, female, white, alive, 3500 days
932.0
TCGA-24-1416-01A
34 years, female, white, alive, 194 days
926.6
TCGA-24-0968-01A
59 years, female, white, dead, 598 days
920.7
TCGA-25-2401-01A
64 years, female, white, dead, 90 days
917.9
TCGA-13-1495-01A
60 years, female, white, dead, 2749 days
916.4
TCGA-61-1900-01A
51 years, female, black or african american, alive, 176 days
914.6
TCGA-23-2084-01A
45 years, female, white, dead, 1516 days
913.9
TCGA-36-1580-01A
82 years, female, dead, 737 days
906.9
TCGA-24-1844-01A
64 years, female, white, alive, 113 days
904.7
TCGA-24-1603-01A
53 years, female, white, dead, 2742 days
902.8
TCGA-13-0883-01A
61 years, female, white, dead, 2097 days
897.2
TCGA-09-1673-01A
50 years, female, white, alive, 92 days
881.3
TCGA-09-1669-01A
54 years, female, white, alive, 928 days
880.2
TCGA-61-1918-01A
45 years, female, white, dead, 479 days
878.0
TCGA-61-1738-01A
60 years, female, black or african american, dead, 1089 days
875.3
TCGA-30-1866-01A
61 years, female, white, dead, 1114 days
874.5
TCGA-13-1485-01A
48 years, female, white, dead, 629 days
874.5
TCGA-59-2363-01A
female, asian, alive, 165 days
873.2
TCGA-29-1777-01A
47 years, female, white, alive, 374 days
869.6
TCGA-25-1623-01A
71 years, female, white, dead, 565 days
869.1
TCGA-25-2398-01A
71 years, female, white, dead, 1369 days
868.8
TCGA-24-2035-01A
65 years, female, white, dead, 857 days
867.8
TCGA-24-1105-01A
36 years, female, white, dead, 1442 days
866.6
TCGA-59-2352-01A
female, white, dead, 286 days
863.8
TCGA-24-1552-01A
77 years, female, white, dead, 1259 days
863.5
TCGA-23-1119-01A
64 years, female, white, alive, 3953 days
861.1
TCGA-29-1774-01A
82 years, female, white, alive, 527 days
857.6
TCGA-24-2290-01A
56 years, female, white, dead, 1102 days
857.2
TCGA-13-1483-01A
61 years, female, white, dead, 895 days
856.5
TCGA-OY-A56Q-01A
78 years, female, black or african american, alive, 576 days
851.1
TCGA-13-1411-01A
81 years, female, white, dead, 531 days
849.5
TCGA-24-1430-01A
68 years, female, white, dead, 863 days
846.0
TCGA-23-1111-01A
63 years, female, white, alive, 98 days
842.8
TCGA-57-1586-01A
66 years, female, white, alive, 679 days
838.9
TCGA-13-0797-01A
49 years, female, white, alive, 2121 days
838.8
TCGA-09-2048-01A
63 years, female, white, dead, 138 days
837.5
TCGA-13-0730-01A
71 years, female, white, dead, 542 days
833.2
TCGA-24-0970-01B
63 years, female, white, dead, 354 days
828.9
TCGA-04-1338-01A
78 years, female, white, alive, 1418 days
828.2
TCGA-23-2077-01A
45 years, female, white, alive, 3525 days
825.2
TCGA-25-1312-01A
69 years, female, white, dead, 31 days
819.8
TCGA-13-0891-01A
73 years, female, white, dead, 3128 days
819.7
TCGA-30-1861-01A
74 years, female, white, dead, 1058 days
818.5
TCGA-24-1850-01A
72 years, female, white, alive, 168 days
809.8
TCGA-24-2261-01A
76 years, female, white, dead, 24 days
809.8
TCGA-29-1696-01A
43 years, female, white, dead, 1032 days
806.1
TCGA-09-2054-01A
58 years, female, black or african american, dead, 637 days
804.7
TCGA-61-1733-01A
71 years, female, white, alive, 967 days
802.9
TCGA-24-1924-01A
65 years, female, white, dead, 919 days
799.5
TCGA-25-1633-01A
64 years, female, white, dead, 1891 days
797.6
TCGA-61-1907-01A
63 years, female, white, alive, 952 days
796.4
TCGA-31-1946-01A
30 years, female, alive, 918 days
791.5
TCGA-31-1950-01A
76 years, female, white, alive, 571 days
790.9
TCGA-23-1028-01A
43 years, female, white, alive, 1503 days
790.4
TCGA-29-1695-01A
62 years, female, white, dead, 1229 days
788.1
TCGA-29-1701-01A
56 years, female, white, dead, 515 days
785.4
TCGA-57-1585-01A
57 years, female, white, dead, 53 days
778.7
TCGA-24-1435-01A
57 years, female, white, dead, 1324 days
778.0
TCGA-24-2271-01A
55 years, female, asian, dead, 962 days
776.8
TCGA-13-1507-01A
77 years, female, white, dead, 1993 days
776.0
TCGA-13-1492-01A
66 years, female, white, dead, 3819 days
765.6
TCGA-61-1725-01A
40 years, female, white, alive, 956 days
762.6
TCGA-13-1496-01A
65 years, female, white, dead, 129 days
762.2
TCGA-36-1571-01A
53 years, female, white, dead, 695 days
761.1
TCGA-61-2104-01A
53 years, female, white, alive, 2338 days
759.4
TCGA-61-1998-01A
48 years, female, white, alive, 168 days
758.9
TCGA-29-2427-01A
60 years, female, white, alive, 1900 days
755.3
TCGA-13-2060-01A
51 years, female, white, alive, 2369 days
751.6
TCGA-23-1116-01A
83 years, female, white, dead, 592 days
747.0
TCGA-13-0886-01A
67 years, female, white, alive, 4665 days
740.7
TCGA-25-1329-01A
76 years, female, white, dead, 457 days
738.0
TCGA-09-1665-01B
74 years, female, white, dead, 1266 days
733.1
TCGA-24-2023-01A
54 years, female, white, dead, 1364 days
732.1
TCGA-24-2280-01A
74 years, female, white, alive, 2143 days
730.9
TCGA-59-2350-01A
female, dead, 679 days
730.0
TCGA-59-A5PD-01A
55 years, female, black or african american, dead, 624 days
714.6
TCGA-24-1550-01A
49 years, female, white, dead, 1249 days
714.4
TCGA-61-1995-01A
43 years, female, white, alive, 61 days
709.4
TCGA-29-1697-01A
62 years, female, white, dead, 949 days
707.0
TCGA-30-1857-01A
64 years, female, white, dead, 8 days
706.8
TCGA-25-1627-01A
73 years, female, white, dead, 394 days
703.9
TCGA-09-2044-01B
77 years, female, asian, alive, 186 days
702.9
TCGA-25-1323-01A
72 years, female, white, dead, 395 days
702.9
TCGA-24-2020-01A
67 years, female, white, dead, 4624 days
702.7
TCGA-24-1427-01A
58 years, female, alive, 147 days
700.8
TCGA-30-1718-01A
44 years, female, white, dead, 1579 days
700.4
TCGA-24-2026-01A
79 years, female, white, dead, 1059 days
699.6
TCGA-24-1418-01A
68 years, female, white, alive, 243 days
699.1
TCGA-61-1914-01A
65 years, female, alive, 1722 days
698.8
TCGA-24-1474-01A
57 years, female, black or african american, dead, 676 days
698.7
TCGA-61-2097-01A
71 years, female, white, alive, 1844 days
698.7
TCGA-29-1694-01A
45 years, female, white, dead, 1187 days
695.8
TCGA-20-1686-01A
75 years, female, white, alive, 89 days
692.9
TCGA-04-1332-01A
70 years, female, white, dead, 1247 days
689.5
TCGA-24-1434-01A
59 years, female, white, dead, 568 days
688.4
TCGA-61-2111-01A
61 years, female, white, alive, 3825 days
687.8
TCGA-13-1403-01A
48 years, female, white, dead, 2345 days
684.7
TCGA-24-2254-01A
66 years, female, white, dead, 1736 days
683.8
TCGA-29-1693-01A
72 years, female, white, alive, 3096 days
681.6
TCGA-29-1785-01A
55 years, female, white, dead, 1104 days
681.5
TCGA-13-0893-01B
48 years, female, black or african american, dead, 1319 days
666.1
TCGA-13-1498-01A
73 years, female, white, dead, 2012 days
657.0
TCGA-13-1497-01A
48 years, female, white, alive, 3871 days
646.4
TCGA-29-1781-01A
69 years, female, white, alive, 255 days
645.1
TCGA-61-1741-01A
76 years, female, white, dead, 1024 days
642.3
TCGA-24-1567-01A
54 years, female, white, dead, 524 days
641.9
TCGA-24-1470-01A
54 years, female, white, alive, 105 days
640.6
TCGA-24-1549-01A
58 years, female, white, dead, 1721 days
640.4
TCGA-24-2289-01A
69 years, female, white, dead, 2049 days
640.1
TCGA-04-1530-01A
68 years, female, white, dead, 3622 days
640.0
TCGA-13-1410-01A
57 years, female, white, alive, 2464 days
638.9
TCGA-61-2012-01A
81 years, female, white, alive, 932 days
636.9
TCGA-24-2293-01A
47 years, female, white, dead, 506 days
636.9
TCGA-29-1763-01A
43 years, female, black or african american, alive, 2032 days
634.4
TCGA-25-1318-01A
54 years, female, white, dead, 1064 days
633.0
TCGA-25-2409-01A
71 years, female, white, dead, 821 days
631.9
TCGA-VG-A8LO-01A
55 years, female, black or african american, dead, 24 days
630.4
TCGA-36-1568-01A
52 years, female, alive, 875 days
625.5
TCGA-29-1705-01A
48 years, female, white, dead, 555 days
620.0
TCGA-09-1667-01C
61 years, female, white, alive, 1882 days
617.5
TCGA-25-2400-01A
76 years, female, white, dead, 1278 days
615.1
TCGA-36-1576-01A
76 years, female, alive, 915 days
613.8
TCGA-13-1488-01A
59 years, female, white, dead, 2154 days
613.7
TCGA-24-1930-01A
53 years, female, white, dead, 2467 days
610.6
TCGA-29-1762-01A
59 years, female, white, dead, 2634 days
609.5
TCGA-09-0366-01A
56 years, female, white, dead, 1757 days
608.2
TCGA-24-1928-01A
77 years, female, white, dead, 336 days
606.0
TCGA-13-A5FT-01A
67 years, female, black or african american, alive, 2143 days
604.6
TCGA-23-1120-01A
60 years, female, white, alive, 130 days
603.6
TCGA-25-2042-01A
60 years, female, american indian or alaska native, dead, 396 days
601.2
TCGA-09-1666-01A
57 years, female, white, alive, 1752 days
597.1
TCGA-31-1953-01A
52 years, female, asian, alive, 204 days
596.4
TCGA-29-1778-01A
77 years, female, white, alive, 454 days
593.2
TCGA-61-1910-01A
56 years, female, white, alive, 1127 days
591.0
TCGA-24-2036-01A
50 years, female, white, dead, 1947 days
589.3
TCGA-04-1362-01A
59 years, female, white, dead, 1348 days
586.4
TCGA-23-1122-01A
53 years, female, white, dead, 1189 days
585.2
TCGA-13-0720-01A
48 years, female, white, dead, 1355 days
584.9
TCGA-24-2288-01A
70 years, female, white, dead, 25 days
583.4
TCGA-23-2078-01A
66 years, female, white, alive, 2661 days
582.3
TCGA-24-1843-01A
67 years, female, white, alive, 106 days
579.1
TCGA-29-1688-01A
39 years, female, white, dead, 2400 days
576.3
TCGA-13-0908-01B
58 years, female, white, dead, 1843 days
576.2
TCGA-24-1563-01A
66 years, female, black or african american, dead, 1451 days
572.6
TCGA-04-1648-01A
57 years, female, white, dead, 871 days
571.1
TCGA-25-1326-01A
61 years, female, white, dead, 1249 days
565.0
TCGA-23-1123-01A
59 years, female, white, dead, 1018 days
562.9
TCGA-29-1766-01A
74 years, female, white, dead, 1199 days
555.9
TCGA-20-1683-01A
65 years, female, white, alive, 772 days
555.2
TCGA-23-1029-01B
46 years, female, white, alive, 268 days
549.4
TCGA-13-0906-01A
50 years, female, white, alive, 3619 days
548.1
TCGA-24-1104-01A
56 years, female, white, dead, 1933 days
547.9
TCGA-13-0800-01A
52 years, female, white, alive, 2661 days
545.8
TCGA-61-1737-01A
42 years, female, white, alive, 1364 days
539.4
TCGA-61-1911-01A
55 years, female, white, alive, 1293 days
539.0
TCGA-24-1422-01A
82 years, female, black or african american, dead, 23 days
537.7
TCGA-24-2298-01A
56 years, female, white, dead, 1620 days
535.7
TCGA-36-1570-01A
49 years, female, white, alive, 655 days
534.3
TCGA-5X-AA5U-01A
61 years, female, black or african american, alive, 361 days
530.9
TCGA-25-2392-01A
75 years, female, white, dead, 31 days
527.7
TCGA-24-1417-01A
54 years, female, white, alive, 238 days
521.6
TCGA-24-1560-01A
51 years, female, white, dead, 1341 days
521.2
TCGA-61-2003-01A
53 years, female, white, alive, 122 days
520.3
TCGA-13-0923-01A
74 years, female, white, alive, 2547 days
520.2
TCGA-25-1319-01A
73 years, female, white, dead, 1977 days
518.5
TCGA-04-1514-01A
45 years, female, white, dead, 1720 days
518.4
TCGA-23-1114-01B
55 years, female, white, dead, 2089 days
515.4
TCGA-24-1469-01A
71 years, female, white, alive, 277 days
514.6
TCGA-25-2404-01A
38 years, female, american indian or alaska native, dead, 883 days
512.0
TCGA-29-1710-01A
54 years, female, white, dead, 951 days
510.2
TCGA-23-1809-01A
63 years, female, white, alive, 16 days
508.1
TCGA-25-2391-01A
57 years, female, white, dead, 1492 days
506.6
TCGA-25-1313-01A
62 years, female, white, dead, 820 days
503.6
TCGA-31-1944-01A
47 years, female, white, alive, 1386 days
503.5
TCGA-24-2027-01A
51 years, female, white, dead, 3337 days
499.2
TCGA-10-0933-01A
77 years, female, white, dead, 446 days
497.4
TCGA-29-1691-01A
51 years, female, white, dead, 1470 days
491.0
TCGA-29-A5NZ-01A
66 years, female, black or african american, dead, 1088 days
490.7
TCGA-25-1626-01A
65 years, female, white, dead, 518 days
485.7
TCGA-24-1419-01A
62 years, female, white, alive, 239 days
480.3
TCGA-36-1574-01A
48 years, female, asian, alive, 686 days
478.6
TCGA-13-1512-01A
49 years, female, white, alive, 442 days
478.1
TCGA-24-1424-01A
67 years, female, white, alive, 183 days
477.5
TCGA-25-1635-01A
71 years, female, white, dead, 1583 days
474.5
TCGA-61-2102-01A
74 years, female, white, dead, 197 days
470.7
TCGA-24-1557-01A
49 years, female, white, dead, 1213 days
468.6
TCGA-13-0916-01A
49 years, female, white, alive, 1785 days
467.6
TCGA-04-1356-01A
62 years, female, white, dead, 1499 days
461.2
TCGA-57-1994-01A
63 years, female, white, alive, 761 days
458.4
TCGA-04-1536-01A
60 years, female, black or african american, dead, 885 days
453.3
TCGA-25-1320-01A
65 years, female, white, dead, 1155 days
440.5
TCGA-25-1315-01A
50 years, female, white, dead, 1583 days
424.7
TCGA-25-1322-01A
62 years, female, white, dead, 91 days
422.5
TCGA-59-2348-01A
female, white, alive, 5481 days
418.9
TCGA-09-2045-01A
50 years, female, asian, dead, 1069 days
417.0
TCGA-57-1993-01A
56 years, female, white, alive, 763 days
415.8
TCGA-25-1628-01A
67 years, female, white, dead, 627 days
411.8
TCGA-24-1847-01A
45 years, female, white, alive, 343 days
409.8
TCGA-59-2354-01A
female, white, dead, 1046 days
409.7
TCGA-61-2098-01A
62 years, female, white, alive, 1993 days
409.4
TCGA-61-1724-01A
47 years, female, white, dead, 637 days
407.9
TCGA-29-2428-01A
58 years, female, white, alive, 1372 days
406.0
TCGA-09-2051-01A
42 years, female, white, alive, 1919 days
398.7
TCGA-31-1951-01A
58 years, female, white, alive, 684 days
397.1
TCGA-25-2399-01A
80 years, female, white, dead, 608 days
387.9
TCGA-24-2262-01A
57 years, female, white, dead, 11 days
386.2
TCGA-09-1668-01B
57 years, female, white, alive, 1684 days
379.5
TCGA-13-1405-01A
49 years, female, white, dead, 868 days
379.4
TCGA-13-0768-01A
73 years, female, white, dead, 1784 days
350.4
TCGA-24-2297-01A
56 years, female, white, dead, 1699 days
349.7
TCGA-24-1425-01A
45 years, female, white, alive, 181 days
339.7
TCGA-13-1511-01A
52 years, female, asian, dead, 1650 days
339.0
TCGA-04-1331-01A
79 years, female, white, dead, 1336 days
327.8
TCGA-29-1711-01A
45 years, female, black or african american, alive, 1053 days
309.9
TCGA-13-0905-01B
51 years, female, white, alive, 3746 days
303.5
TCGA-36-1581-01A
63 years, female, white, alive, 751 days
301.6
TCGA-24-1423-01A
61 years, female, white, alive, 190 days
285.8
TCGA-24-1558-01A
73 years, female, white, dead, 594 days
276.0
TCGA-61-2088-01A
51 years, female, white, alive, 145 days
248.0
TCGA-61-2113-01A
54 years, female, white, dead, 676 days
235.9
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OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.