Expression of CALR in liver cancer - The Human Protein Atlas

LIVER CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

CALR is not prognostic in liver cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 389.14
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

516.0

Number of samples

365

Samples

Sample	Description	FPKM
TCGA-ZP-A9D2-01A	51 years, male, white, dead, 765 days	1422.0
TCGA-G3-A25X-01A	73 years, male, asian, stage:ii, alive, 1779 days	1333.6
TCGA-ED-A7PX-01A	48 years, female, asian, stage:ii, alive, 6 days	1236.2
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:i, alive, 2728 days	1181.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:iiia, alive, 3675 days	1178.9
TCGA-G3-AAV0-01A	58 years, male, asian, stage:i, alive, 476 days	1142.1
TCGA-DD-AADQ-01A	59 years, male, asian, stage:ii, alive, 436 days	1127.7
TCGA-CC-5263-01A	35 years, male, asian, stage:iiia, dead, 129 days	1060.1
TCGA-2Y-A9GU-01A	55 years, female, white, stage:i, alive, 1939 days	1050.4
TCGA-DD-AAE9-01A	69 years, male, asian, stage:i, alive, 722 days	1009.8
TCGA-2Y-A9GV-01A	54 years, female, white, stage:i, dead, 2532 days	994.7
TCGA-CC-5264-01A	71 years, male, asian, stage:iiia, dead, 102 days	992.1
TCGA-DD-AAEG-01A	59 years, female, asian, stage:i, alive, 719 days	975.4
TCGA-G3-A5SI-01A	44 years, male, asian, stage:ii, dead, 768 days	972.2
TCGA-PD-A5DF-01A	58 years, female, white, stage:iiib, dead, 639 days	964.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:ii, alive, 20 days	927.4
TCGA-RC-A7S9-01A	47 years, female, asian, stage:i, alive, 640 days	914.6
TCGA-DD-AACY-01A	61 years, male, asian, stage:i, alive, 1450 days	913.6
TCGA-CC-A123-01A	24 years, female, asian, stage:iiia, alive, 219 days	906.4
TCGA-CC-A7IG-01A	47 years, male, asian, stage:ii, dead, 299 days	900.2
TCGA-DD-A114-01A	42 years, male, black or african american, stage:ii, dead, 1149 days	893.5
TCGA-DD-AADF-01A	64 years, female, asian, stage:i, dead, 115 days	886.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:i, alive, 1562 days	872.5
TCGA-DD-A1EJ-01A	71 years, female, white, stage:iiic, dead, 1005 days	869.8
TCGA-EP-A3RK-01A	73 years, male, white, stage:iiia, alive, 363 days	866.9
TCGA-FV-A4ZP-01A	78 years, male, white, stage:iiia, dead, 2486 days	861.4
TCGA-G3-A7M9-01A	70 years, male, white, stage:iiib, dead, 56 days	853.2
TCGA-DD-AACL-01A	66 years, female, asian, stage:i, dead, 107 days	850.9
TCGA-2Y-A9H8-01A	85 years, female, white, dead, 633 days	844.2
TCGA-UB-A7ME-01A	51 years, male, asian, stage:i, alive, 486 days	841.5
TCGA-DD-AAVV-01A	56 years, male, asian, stage:ii, alive, 2455 days	841.1
TCGA-DD-AAD5-01A	54 years, male, asian, stage:i, alive, 1345 days	839.4
TCGA-DD-AACF-01A	68 years, male, asian, stage:i, dead, 365 days	825.4
TCGA-DD-A118-01A	77 years, female, white, stage:ii, alive, 3437 days	825.4
TCGA-BC-A10Z-01A	62 years, female, white, stage:i, dead, 34 days	824.7
TCGA-BD-A3EP-01A	76 years, female, black or african american, stage:i, alive, 409 days	818.3
TCGA-YA-A8S7-01A	69 years, male, white, stage:iiia, dead, 412 days	813.4
TCGA-K7-A6G5-01A	66 years, male, white, stage:i, alive, 512 days	803.3
TCGA-DD-A4NV-01A	61 years, male, white, stage:iiia, alive, 2398 days	800.9
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:ii, alive, 94 days	790.3
TCGA-EP-A3JL-01A	76 years, male, white, stage:i, alive, 303 days	782.7
TCGA-UB-A7MF-01A	57 years, male, white, stage:iiia, dead, 214 days	782.4
TCGA-DD-AADK-01A	68 years, female, asian, stage:ii, alive, 1049 days	781.8
TCGA-DD-A39Z-01A	43 years, female, stage:ii, dead, 601 days	775.4
TCGA-BC-A10U-01A	69 years, male, white, dead, 837 days	774.3
TCGA-G3-AAV3-01A	58 years, female, white, stage:ii, alive, 412 days	771.0
TCGA-LG-A6GG-01A	79 years, female, white, stage:ii, alive, 387 days	765.8
TCGA-KR-A7K8-01A	57 years, male, stage:i, alive, 906 days	764.5
TCGA-DD-AACB-01A	74 years, female, asian, stage:i, alive, 2324 days	758.5
TCGA-FV-A2QR-01A	male, white, stage:i, dead, 581 days	757.1
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:iiib, alive, 396 days	749.8
TCGA-G3-AAV7-01A	38 years, male, asian, stage:ii, alive, 361 days	748.4
TCGA-ED-A7XO-01A	29 years, male, asian, stage:iiia, alive, 427 days	740.0
TCGA-ED-A459-01A	47 years, male, asian, stage:ii, alive, 910 days	732.1
TCGA-KR-A7K2-01A	64 years, male, white, stage:i, alive, 829 days	729.4
TCGA-5C-A9VH-01A	70 years, male, white, stage:i, alive, 322 days	724.9
TCGA-UB-A7MB-01A	24 years, male, white, stage:ii, alive, 601 days	720.5
TCGA-ZS-A9CD-01A	73 years, male, white, stage:ii, dead, 1386 days	713.0
TCGA-DD-AAE0-01A	45 years, female, asian, stage:iiia, alive, 555 days	712.8
TCGA-BC-A217-01A	75 years, female, white, stage:ii, dead, 1397 days	711.2
TCGA-2Y-A9GS-01A	58 years, male, white, dead, 724 days	707.7
TCGA-MI-A75I-01A	61 years, male, black or african american, alive, 630 days	706.9
TCGA-FV-A3I1-01A	female, white, stage:ii, dead, 247 days	698.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:iiia, dead, 140 days	691.5
TCGA-UB-AA0U-01A	60 years, male, white, stage:ii, alive, 327 days	690.2
TCGA-CC-A3M9-01A	45 years, male, asian, stage:iiia, dead, 300 days	685.6
TCGA-DD-A4NE-01A	75 years, female, white, stage:iiia, dead, 660 days	684.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:i, alive, 1242 days	683.1
TCGA-DD-AADL-01A	58 years, male, asian, stage:i, alive, 636 days	675.9
TCGA-DD-AACU-01A	59 years, male, asian, stage:i, alive, 1567 days	675.2
TCGA-BC-A69H-01A	64 years, male, white, stage:ii, alive, 444 days	672.3
TCGA-BC-4073-01B	73 years, male, white, stage:iiia, alive, 849 days	671.8
TCGA-G3-A25Z-01A	58 years, male, asian, stage:i, alive, 655 days	667.0
TCGA-DD-A39Y-01A	67 years, male, asian, stage:i, dead, 171 days	662.8
TCGA-DD-AACK-01A	70 years, male, asian, stage:i, alive, 9 days	662.2
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:i, alive, 12 days	659.1
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:i, dead, 52 days	658.6
TCGA-CC-A7II-01A	55 years, male, asian, stage:iiia, alive, 399 days	657.2
TCGA-DD-A1EK-01A	64 years, female, white, stage:ivb, dead, 558 days	655.6
TCGA-G3-A7M7-01A	65 years, male, white, stage:i, alive, 361 days	653.4
TCGA-RC-A6M6-01A	75 years, male, white, stage:ii, alive, 9 days	653.3
TCGA-HP-A5N0-01A	88 years, female, dead, 1147 days	651.9
TCGA-BD-A2L6-01A	69 years, male, white, alive, 1363 days	650.5
TCGA-DD-AACI-01A	69 years, male, asian, stage:ii, alive, 1618 days	650.1
TCGA-DD-A3A3-01A	45 years, male, asian, stage:i, dead, 535 days	648.0
TCGA-DD-AAEA-01A	65 years, male, asian, stage:i, alive, 575 days	644.6
TCGA-DD-A11D-01A	57 years, female, white, stage:i, dead, 1560 days	638.1
TCGA-DD-A39V-01A	77 years, male, white, stage:ii, dead, 643 days	637.2
TCGA-4R-AA8I-01A	66 years, male, white, stage:ii, dead, 262 days	635.4
TCGA-O8-A75V-01A	54 years, male, stage:i, alive, 538 days	633.9
TCGA-5R-AAAM-01A	65 years, female, white, stage:ii, dead, 46 days	628.9
TCGA-DD-AAVU-01A	46 years, male, asian, stage:ii, alive, 2202 days	628.7
TCGA-DD-A4NH-01A	65 years, female, white, stage:iiib, alive, 917 days	624.1
TCGA-G3-AAV6-01A	53 years, female, white, stage:iiia, dead, 65 days	624.0
TCGA-DD-A1EG-01A	77 years, male, white, stage:i, dead, 1372 days	623.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:ii, alive, 382 days	623.0
TCGA-WQ-AB4B-01A	62 years, male, white, stage:ii, alive, 395 days	616.5
TCGA-BC-A5W4-01A	69 years, male, white, stage:iiia, dead, 547 days	614.4
TCGA-DD-AAVP-01A	48 years, male, asian, stage:i, alive, 2752 days	613.7
TCGA-DD-AADN-01A	59 years, male, asian, stage:i, alive, 898 days	613.4
TCGA-G3-A7M8-01A	31 years, male, asian, stage:i, alive, 430 days	613.3
TCGA-5C-A9VG-01A	58 years, male, white, stage:ii, alive, 328 days	612.5
TCGA-G3-AAV5-01A	67 years, male, white, stage:ii, alive, 354 days	611.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:i, alive, 1823 days	603.6
TCGA-2Y-A9GW-01A	64 years, male, white, stage:i, dead, 1271 days	602.1
TCGA-DD-AAC8-01A	72 years, male, asian, stage:i, dead, 16 days	600.3
TCGA-DD-AAD2-01A	66 years, male, asian, stage:i, alive, 658 days	600.0
TCGA-DD-AAD3-01A	43 years, male, asian, stage:i, alive, 1295 days	598.9
TCGA-DD-A3A4-01A	37 years, male, white, stage:iiia, dead, 612 days	598.7
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:i, dead, 438 days	593.9
TCGA-G3-A5SJ-01A	59 years, male, white, stage:i, alive, 698 days	586.1
TCGA-GJ-A6C0-01A	75 years, female, white, stage:ii, dead, 31 days	585.6
TCGA-ZS-A9CE-01A	79 years, female, white, stage:ii, alive, 1241 days	585.2
TCGA-DD-A4NN-01A	56 years, female, white, stage:i, dead, 899 days	582.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:ivb, dead, 931 days	582.2
TCGA-G3-A3CG-01A	80 years, male, white, stage:i, alive, 673 days	580.3
TCGA-CC-5259-01A	60 years, female, asian, stage:iiic, alive, 250 days	576.2
TCGA-DD-AACC-01A	61 years, male, asian, stage:i, dead, 1685 days	575.5
TCGA-DD-AADI-01A	43 years, female, asian, stage:i, alive, 1085 days	575.0
TCGA-DD-AAEI-01A	72 years, male, asian, stage:i, alive, 1531 days	565.7
TCGA-DD-AACD-01A	48 years, male, asian, stage:i, dead, 381 days	564.5
TCGA-GJ-A9DB-01A	68 years, male, white, stage:i, dead, 67 days	564.4
TCGA-DD-AADO-01A	55 years, male, asian, stage:i, alive, 453 days	561.1
TCGA-WX-AA44-01A	64 years, female, white, stage:i, alive, 615 days	560.4
TCGA-DD-A3A1-01A	65 years, male, stage:iiia, dead, 233 days	560.0
TCGA-2Y-A9GY-01A	64 years, female, white, stage:ii, dead, 757 days	558.4
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:iiia, alive, 20 days	557.4
TCGA-ZP-A9CV-01A	59 years, male, white, dead, 1088 days	556.2
TCGA-DD-AACP-01A	65 years, male, asian, stage:i, alive, 415 days	554.4
TCGA-DD-AAE1-01A	52 years, male, asian, stage:i, alive, 552 days	554.3
TCGA-DD-A73G-01A	73 years, female, white, stage:i, alive, 3478 days	553.5
TCGA-K7-AAU7-01A	61 years, male, white, stage:ii, alive, 359 days	551.5
TCGA-DD-AADW-01A	48 years, male, asian, stage:i, alive, 587 days	549.7
TCGA-DD-A119-01A	40 years, male, asian, stage:iv, dead, 223 days	549.0
TCGA-DD-A73B-01A	72 years, female, white, stage:i, dead, 283 days	548.1
TCGA-DD-A73C-01A	65 years, female, white, stage:iiia, alive, 701 days	547.8
TCGA-DD-AA3A-01A	81 years, female, white, stage:i, dead, 410 days	546.8
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:i, dead, 19 days	546.2
TCGA-XR-A8TG-01A	59 years, male, white, stage:i, alive, 898 days	546.1
TCGA-2Y-A9H3-01A	45 years, male, white, stage:ii, alive, 1516 days	542.0
TCGA-GJ-A3OU-01A	59 years, male, white, stage:i, alive, 879 days	541.7
TCGA-CC-A9FW-01A	68 years, male, asian, stage:iiia, alive, 248 days	539.7
TCGA-DD-AAC9-01A	51 years, male, asian, stage:i, alive, 347 days	533.6
TCGA-CC-A8HV-01A	51 years, female, asian, stage:ii, dead, 279 days	532.6
TCGA-DD-A4NJ-01A	54 years, female, white, stage:ii, alive, 928 days	531.8
TCGA-ZP-A9D1-01A	56 years, female, white, alive, 21 days	531.4
TCGA-ED-A7XP-01A	53 years, female, asian, stage:ii, alive, 400 days	530.3
TCGA-KR-A7K7-01A	61 years, female, white, stage:ii, alive, 951 days	529.6
TCGA-ZS-A9CF-01A	64 years, male, white, stage:ii, alive, 2412 days	529.0
TCGA-XR-A8TC-01A	43 years, female, white, stage:i, alive, 1339 days	528.0
TCGA-G3-A25Y-01A	52 years, female, asian, stage:i, dead, 452 days	525.7
TCGA-EP-A2KA-01A	52 years, female, white, stage:iiia, dead, 627 days	525.7
TCGA-ED-A66X-01A	35 years, male, asian, stage:iiia, alive, 406 days	525.2
TCGA-DD-A3A7-01A	67 years, male, stage:iiib, dead, 419 days	520.9
TCGA-DD-AADG-01A	70 years, male, asian, stage:iiia, alive, 1145 days	520.4
TCGA-DD-A1EB-01A	72 years, female, stage:i, alive, 2017 days	515.9
TCGA-DD-AADY-01A	55 years, female, asian, stage:i, alive, 555 days	515.5
TCGA-CC-A7IL-01A	61 years, male, asian, stage:iiia, dead, 278 days	513.9
TCGA-WX-AA47-01A	33 years, female, white, stage:iiia, dead, 556 days	513.0
TCGA-DD-AAVW-01A	35 years, male, asian, stage:i, alive, 2317 days	512.4
TCGA-CC-A8HS-01A	18 years, male, asian, stage:iiic, dead, 300 days	511.9
TCGA-DD-AACQ-01A	50 years, male, asian, stage:ii, dead, 432 days	511.8
TCGA-DD-AAW3-01A	69 years, male, asian, stage:i, alive, 1633 days	511.4
TCGA-LG-A9QD-01A	68 years, male, white, stage:iiia, alive, 366 days	511.1
TCGA-DD-AAEK-01A	51 years, male, asian, stage:ii, alive, 1067 days	509.1
TCGA-DD-A4NR-01A	85 years, female, white, stage:i, dead, 9 days	508.8
TCGA-FV-A3I0-01A	76 years, female, white, stage:ii, alive, 848 days	507.5
TCGA-DD-AADD-01A	51 years, male, asian, stage:i, alive, 1231 days	506.7
TCGA-DD-AAE2-01A	51 years, male, asian, stage:i, alive, 638 days	503.2
TCGA-CC-A7IE-01A	57 years, male, asian, stage:iiia, dead, 217 days	502.0
TCGA-DD-A1EI-01A	46 years, male, asian, stage:i, alive, 183 days	501.9
TCGA-WJ-A86L-01A	68 years, female, white, stage:i, alive, 345 days	501.8
TCGA-XR-A8TE-01A	16 years, male, white, stage:iiia, alive, 925 days	500.9
TCGA-T1-A6J8-01A	68 years, male, white, alive, 23 days	499.2
TCGA-ED-A66Y-01A	51 years, female, asian, stage:iiia, dead, 296 days	498.9
TCGA-CC-A3MB-01A	36 years, male, asian, stage:iiia, dead, 315 days	496.0
TCGA-DD-AACJ-01A	75 years, male, asian, stage:ii, alive, 2102 days	494.6
TCGA-G3-A25S-01A	64 years, male, white, stage:i, dead, 416 days	493.0
TCGA-DD-A1EH-01A	23 years, male, white, stage:iii, alive, 1495 days	492.0
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:ii, alive, 1098 days	490.3
TCGA-CC-A5UC-01A	63 years, male, asian, stage:iiia, dead, 347 days	490.1
TCGA-2Y-A9GT-01A	51 years, male, white, stage:i, dead, 1624 days	486.5
TCGA-DD-AAVY-01A	56 years, male, asian, stage:iiia, alive, 1970 days	485.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:i, alive, 729 days	485.0
TCGA-BC-A3KF-01A	66 years, female, white, stage:i, alive, 8 days	482.4
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:i, alive, 1900 days	481.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:iiia, alive, 363 days	480.8
TCGA-DD-AADM-01A	58 years, male, asian, stage:ii, dead, 12 days	479.7
TCGA-ZP-A9CY-01A	66 years, female, white, alive, 782 days	474.9
TCGA-DD-AAE4-01A	49 years, female, asian, stage:i, alive, 608 days	472.3
TCGA-RC-A7SH-01A	42 years, male, asian, stage:ii, alive, 468 days	472.2
TCGA-FV-A3R2-01A	75 years, male, white, stage:i, dead, 194 days	469.7
TCGA-CC-5261-01A	44 years, male, asian, stage:ii, dead, 97 days	466.1
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:ii, alive, 6 days	465.4
TCGA-G3-A25V-01A	68 years, male, white, stage:i, alive, 860 days	464.4
TCGA-DD-AAED-01A	51 years, male, asian, stage:i, alive, 763 days	460.9
TCGA-DD-AAD8-01A	73 years, female, asian, stage:i, alive, 1219 days	459.7
TCGA-BC-A10Y-01A	76 years, male, white, dead, 711 days	459.0
TCGA-DD-AADV-01A	50 years, male, asian, stage:i, alive, 574 days	456.3
TCGA-MI-A75G-01A	63 years, male, white, stage:ii, alive, 698 days	455.1
TCGA-ED-A5KG-01A	60 years, female, asian, stage:ii, alive, 854 days	454.1
TCGA-FV-A496-01A	84 years, female, white, stage:i, alive, 10 days	453.7
TCGA-CC-A3MA-01A	61 years, male, asian, stage:iiia, dead, 303 days	452.8
TCGA-HP-A5MZ-01A	62 years, male, stage:i, dead, 91 days	450.6
TCGA-BC-A3KG-01A	68 years, female, white, stage:ii, alive, 680 days	448.6
TCGA-XR-A8TD-01A	49 years, female, white, stage:iiib, alive, 1030 days	448.6
TCGA-RC-A7SB-01A	53 years, male, asian, stage:ii, alive, 588 days	445.6
TCGA-BD-A3ER-01A	62 years, male, white, stage:ii, alive, 1115 days	445.2
TCGA-G3-A5SM-01A	58 years, male, white, stage:ii, alive, 520 days	444.9
TCGA-ES-A2HS-01A	80 years, male, white, stage:i, dead, 688 days	444.8
TCGA-G3-A7M6-01A	60 years, female, white, stage:i, alive, 632 days	443.7
TCGA-DD-AACZ-01A	63 years, female, asian, stage:i, dead, 171 days	443.6
TCGA-2Y-A9H7-01A	81 years, female, white, stage:i, alive, 1168 days	442.7
TCGA-MR-A8JO-01A	34 years, male, white, stage:i, alive, 330 days	442.5
TCGA-DD-AACN-01A	32 years, male, asian, stage:i, alive, 1302 days	442.2
TCGA-CC-5262-01A	67 years, male, asian, stage:iiic, dead, 103 days	441.8
TCGA-CC-A9FS-01A	55 years, male, asian, stage:ii, alive, 211 days	439.5
TCGA-NI-A4U2-01A	71 years, male, white, stage:iiia, dead, 1791 days	438.0
TCGA-DD-AAD1-01A	51 years, female, asian, stage:i, alive, 564 days	436.7
TCGA-G3-A5SK-01A	58 years, male, white, stage:i, alive, 744 days	435.0
TCGA-DD-AAE6-01A	59 years, female, asian, stage:i, alive, 141 days	434.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:ii, alive, 170 days	430.4
TCGA-DD-AADJ-01A	70 years, female, asian, stage:i, alive, 1066 days	428.2
TCGA-DD-AAVR-01A	44 years, male, asian, stage:i, alive, 2513 days	426.4
TCGA-G3-A25T-01A	45 years, female, white, stage:iiia, alive, 1553 days	425.5
TCGA-DD-A115-01A	53 years, male, white, stage:iiia, dead, 2542 days	424.0
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:ii, dead, 415 days	423.9
TCGA-DD-A4NO-01A	66 years, male, white, stage:i, alive, 2245 days	423.2
TCGA-ED-A8O5-01A	59 years, female, asian, stage:iiia, alive, 406 days	421.6
TCGA-G3-AAV2-01A	50 years, male, white, stage:i, alive, 372 days	420.1
TCGA-DD-A11C-01A	69 years, male, white, stage:i, alive, 662 days	419.1
TCGA-DD-A4NQ-01A	60 years, male, white, stage:ii, dead, 373 days	417.0
TCGA-DD-A113-01A	55 years, female, white, stage:ii, alive, 2425 days	414.5
TCGA-FV-A495-01A	51 years, female, white, stage:ii, alive, 1 days	413.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:i, dead, 555 days	413.2
TCGA-FV-A3R3-01A	38 years, female, white, stage:i, dead, 366 days	412.4
TCGA-2Y-A9H1-01A	58 years, male, white, stage:i, dead, 1229 days	412.3
TCGA-BC-A112-01A	80 years, male, white, dead, 153 days	411.2
TCGA-DD-AAD0-01A	73 years, female, asian, stage:i, alive, 137 days	406.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:i, alive, 180 days	404.0
TCGA-DD-AACG-01A	52 years, male, asian, stage:ii, dead, 469 days	402.8
TCGA-DD-A73E-01A	66 years, male, white, stage:i, alive, 44 days	398.8
TCGA-WQ-A9G7-01A	female, white, alive, 30 days	398.5
TCGA-DD-A116-01A	68 years, male, asian, stage:iiia, dead, 1622 days	398.2
TCGA-KR-A7K0-01A	65 years, male, white, stage:i, dead, 65 days	397.9
TCGA-CC-5260-01A	61 years, female, asian, stage:iiic, dead, 87 days	397.4
TCGA-ED-A8O6-01A	50 years, female, asian, stage:iiia, dead, 56 days	395.0
TCGA-DD-AADP-01A	45 years, male, asian, stage:i, alive, 458 days	394.0
TCGA-2Y-A9H6-01A	68 years, female, white, stage:i, alive, 357 days	390.6
TCGA-DD-A1EE-01A	73 years, male, white, stage:iiia, dead, 349 days	389.7
TCGA-DD-AADC-01A	53 years, male, asian, stage:i, dead, 425 days	389.6
TCGA-2Y-A9GX-01A	68 years, male, white, stage:i, alive, 2442 days	388.6
TCGA-DD-AAW0-01A	54 years, male, asian, stage:i, alive, 2015 days	386.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:i, alive, 1531 days	384.8
TCGA-BC-A8YO-01A	66 years, female, white, stage:iiic, alive, 562 days	384.5
TCGA-BC-A10S-01A	81 years, male, white, dead, 1423 days	384.3
TCGA-CC-A1HT-01A	50 years, male, asian, stage:iiia, dead, 101 days	379.0
TCGA-DD-A1EA-01A	68 years, male, asian, stage:ii, alive, 2415 days	378.9
TCGA-DD-A73A-01A	71 years, male, white, stage:i, alive, 728 days	378.4
TCGA-DD-A3A5-01A	66 years, female, white, stage:iii, dead, 3125 days	377.7
TCGA-2Y-A9H9-01A	70 years, male, white, stage:i, alive, 697 days	375.2
TCGA-2Y-A9HA-01A	70 years, male, white, stage:ii, dead, 36 days	375.2
TCGA-BC-A10R-01A	66 years, female, white, dead, 308 days	374.2
TCGA-2Y-A9HB-01A	66 years, male, stage:i, alive, 260 days	372.4
TCGA-CC-A7IH-01A	58 years, male, asian, stage:iiia, alive, 365 days	370.7
TCGA-G3-AAUZ-01A	48 years, male, stage:i, alive, 480 days	368.9
TCGA-DD-AACS-01A	39 years, male, asian, stage:i, alive, 1804 days	367.9
TCGA-RC-A7SK-01A	59 years, male, asian, stage:i, alive, 472 days	367.7
TCGA-DD-AADA-01A	66 years, female, asian, stage:i, alive, 1233 days	366.6
TCGA-DD-A4ND-01A	56 years, female, white, stage:i, alive, 2746 days	363.7
TCGA-DD-A3A6-01A	72 years, female, white, stage:ii, dead, 3258 days	362.3
TCGA-DD-AACE-01A	62 years, male, asian, stage:i, alive, 2184 days	361.9
TCGA-CC-A7IK-01A	59 years, male, asian, stage:iiia, dead, 262 days	361.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:i, alive, 566 days	361.7
TCGA-UB-A7MA-01A	62 years, female, white, stage:ii, alive, 848 days	360.9
TCGA-ZP-A9D0-01A	67 years, female, black or african american, alive, 1091 days	360.9
TCGA-G3-A3CK-01A	61 years, male, asian, stage:i, alive, 585 days	359.0
TCGA-DD-AACO-01A	40 years, male, asian, stage:i, alive, 1876 days	354.4
TCGA-DD-A1EC-01A	20 years, female, white, stage:i, alive, 602 days	354.1
TCGA-ZP-A9CZ-01A	72 years, male, asian, alive, 706 days	353.6
TCGA-ZS-A9CG-01A	55 years, male, white, stage:ii, alive, 341 days	352.7
TCGA-MR-A520-01A	58 years, male, white, stage:i, alive, 229 days	351.1
TCGA-MI-A75E-01A	61 years, male, white, stage:iiic, alive, 507 days	350.9
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:i, alive, 1452 days	349.0
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:ii, dead, 848 days	345.8
TCGA-CC-A8HU-01A	39 years, female, asian, stage:iiia, dead, 344 days	344.3
TCGA-DD-A3A8-01A	75 years, male, white, stage:ii, dead, 11 days	343.9
TCGA-DD-A39X-01A	78 years, female, white, stage:i, dead, 1694 days	342.5
TCGA-ED-A82E-01A	60 years, female, asian, stage:iiia, alive, 408 days	339.4
TCGA-RC-A6M5-01A	20 years, female, white, stage:iva, alive, 15 days	338.9
TCGA-DD-AAEH-01A	73 years, male, asian, stage:i, alive, 784 days	338.6
TCGA-CC-5258-01A	48 years, male, asian, stage:ii, dead, 129 days	335.2
TCGA-MI-A75H-01A	77 years, male, white, alive, 747 days	335.1
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:i, alive, 519 days	334.4
TCGA-BC-A216-01A	62 years, female, white, stage:iiia, alive, 1351 days	331.5
TCGA-BC-4072-01B	74 years, female, white, stage:iiia, dead, 1490 days	328.6
TCGA-5R-AA1C-01A	57 years, male, white, stage:ii, alive, 520 days	328.5
TCGA-RC-A7SF-01A	66 years, male, asian, stage:i, alive, 579 days	326.5
TCGA-FV-A23B-01A	70 years, female, white, stage:ii, dead, 1852 days	325.6
TCGA-ED-A7PY-01A	20 years, female, asian, stage:ii, alive, 390 days	325.0
TCGA-BC-A69I-01A	69 years, male, white, stage:i, alive, 387 days	324.6
TCGA-DD-A73F-01A	77 years, female, white, stage:i, alive, 1085 days	323.7
TCGA-G3-AAV4-01A	83 years, female, white, stage:i, dead, 27 days	323.7
TCGA-ED-A627-01A	74 years, male, white, stage:i, alive, 423 days	322.4
TCGA-CC-A7IF-01A	59 years, male, asian, stage:iiia, dead, 649 days	321.8
TCGA-CC-A5UD-01A	45 years, male, asian, stage:iiia, dead, 304 days	319.7
TCGA-DD-A4NB-01A	25 years, male, white, stage:i, alive, 989 days	318.6
TCGA-DD-AAD6-01A	66 years, male, asian, stage:iiia, alive, 672 days	316.9
TCGA-DD-A4NA-01A	67 years, female, white, stage:iiic, alive, 1008 days	316.0
TCGA-CC-A5UE-01A	48 years, male, asian, stage:iiib, dead, 272 days	315.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:i, alive, 1424 days	312.3
TCGA-G3-A5SL-01A	70 years, male, white, stage:ii, alive, 621 days	311.3
TCGA-BC-A10Q-01A	72 years, female, white, dead, 1135 days	309.5
TCGA-ED-A97K-01A	54 years, male, asian, stage:iiia, alive, 6 days	306.6
TCGA-G3-A25U-01A	63 years, female, asian, stage:i, alive, 1636 days	306.6
TCGA-DD-A4NP-01A	32 years, male, white, stage:i, alive, 3308 days	306.6
TCGA-DD-AADS-01A	63 years, male, asian, stage:i, alive, 474 days	305.9
TCGA-DD-AAE7-01A	72 years, male, asian, stage:i, alive, 644 days	305.6
TCGA-DD-AAVX-01A	38 years, male, asian, stage:ii, alive, 1570 days	305.1
TCGA-K7-A5RF-01A	64 years, male, white, stage:i, alive, 631 days	305.0
TCGA-DD-AAEB-01A	60 years, male, asian, stage:i, alive, 478 days	301.1
TCGA-DD-AAW1-01A	55 years, male, asian, stage:iiia, alive, 1989 days	301.0
TCGA-DD-A1EF-01A	57 years, female, white, stage:i, dead, 394 days	300.7
TCGA-DD-AADR-01A	58 years, male, asian, stage:i, alive, 2028 days	299.5
TCGA-DD-A4NL-01A	46 years, male, white, stage:i, alive, 1711 days	297.4
TCGA-G3-A6UC-01A	65 years, male, white, stage:iiib, alive, 671 days	296.9
TCGA-DD-AAEE-01A	55 years, male, asian, stage:i, alive, 810 days	296.8
TCGA-G3-A7M5-01A	76 years, male, asian, stage:i, alive, 447 days	290.5
TCGA-DD-A11B-01A	73 years, male, white, stage:i, dead, 14 days	288.6
TCGA-DD-AACH-01A	69 years, male, asian, stage:ii, dead, 195 days	285.2
TCGA-MI-A75C-01A	64 years, male, white, stage:i, alive, 291 days	279.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:iiia, alive, 500 days	277.3
TCGA-G3-A3CH-01A	53 years, male, asian, stage:iiia, alive, 780 days	273.8
TCGA-RC-A6M4-01A	74 years, female, white, stage:iiia, alive, 22 days	266.0
TCGA-DD-A3A2-01A	76 years, female, white, stage:i, dead, 2131 days	261.1
TCGA-NI-A8LF-01A	74 years, male, white, stage:i, alive, 799 days	258.5
TCGA-DD-A39W-01A	29 years, female, white, stage:iii, dead, 827 days	256.7
TCGA-LG-A9QC-01A	48 years, male, white, stage:i, alive, 425 days	253.5
TCGA-BC-A110-01A	51 years, female, black or african american, dead, 2116 days	251.5
TCGA-DD-A4NS-01A	62 years, female, white, stage:i, dead, 2456 days	246.2
TCGA-DD-A11A-01A	67 years, male, black or african american, stage:i, alive, 79 days	245.5
TCGA-DD-A1ED-01A	68 years, male, white, stage:i, alive, 2301 days	245.5
TCGA-EP-A12J-01A	63 years, male, black or african american, stage:i, alive, 570 days	240.5
TCGA-DD-A4NI-01A	67 years, male, white, stage:ii, alive, 816 days	237.1
TCGA-WX-AA46-01A	62 years, male, white, stage:ii, alive, 756 days	236.3
TCGA-ED-A4XI-01A	58 years, male, asian, stage:ii, alive, 819 days	236.1
TCGA-DD-AADU-01A	60 years, male, asian, stage:ii, alive, 554 days	231.0
TCGA-EP-A26S-01A	70 years, male, white, stage:i, alive, 608 days	228.3
TCGA-UB-AA0V-01A	69 years, female, white, stage:i, alive, 314 days	227.8
TCGA-5R-AA1D-01A	17 years, female, white, stage:iiia, alive, 449 days	227.0
TCGA-DD-AACA-01A	65 years, male, asian, stage:i, alive, 2301 days	225.5
TCGA-BC-A10W-01A	50 years, male, asian, dead, 91 days	220.4
TCGA-BC-A10T-01A	76 years, male, white, dead, 837 days	220.3
TCGA-2Y-A9H2-01A	64 years, female, white, stage:i, alive, 1731 days	219.9
TCGA-G3-AAV1-01A	51 years, male, asian, stage:iiic, dead, 359 days	217.6
TCGA-BC-A10X-01A	52 years, female, white, stage:iiia, dead, 770 days	206.7
TCGA-DD-A4NG-01A	77 years, male, white, stage:iiia, dead, 802 days	200.5
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:ii, alive, 594 days	199.1
TCGA-DD-A4NK-01A	80 years, female, white, stage:iiia, dead, 1210 days	198.3
TCGA-DD-AAW2-01A	69 years, male, asian, stage:i, alive, 1855 days	191.6
TCGA-DD-A73D-01A	68 years, female, white, stage:ii, alive, 693 days	185.9
TCGA-EP-A2KB-01A	46 years, female, white, stage:i, dead, 596 days	179.9
TCGA-DD-A4NF-01A	72 years, male, white, stage:i, alive, 942 days	157.2
TCGA-ZP-A9D4-01A	64 years, female, white, alive, 395 days	138.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:i, dead, 693 days	134.2
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells. Read more	Antibody HPA002242	Antibody CAB001513	Antibody CAB019952
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Click images for details