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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1441.4
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
3167.9
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
2902.1
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
2848.8
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
2786.0
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
2733.7
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
2732.7
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
2680.9
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
2598.7
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
2586.3
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
2571.7
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
2476.0
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
2449.5
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
2436.7
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
2374.4
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
2368.3
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
2330.2
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
2324.4
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
2319.0
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
2314.0
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
2251.0
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
2237.4
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
2211.7
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
2182.1
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
2149.8
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
2116.9
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
2109.3
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
2107.2
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
2101.3
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
2100.2
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
2095.8
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
2093.2
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
2084.8
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
2068.6
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
2065.7
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
2063.8
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
2047.7
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
2035.5
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
2030.4
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
2016.0
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
2000.6
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
1994.5
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
1993.8
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1960.1
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
1958.1
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
1933.2
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
1931.2
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
1926.5
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
1925.7
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
1923.3
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
1917.9
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1916.0
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1902.9
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
1901.3
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1890.9
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
1889.0
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
1887.2
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
1881.9
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
1876.6
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
1874.8
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
1858.4
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
1857.5
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
1856.6
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
1854.6
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
1839.3
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
1836.7
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
1836.0
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
1835.1
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
1831.1
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
1828.2
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
1826.3
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
1821.2
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
1819.6
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1819.2
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
1817.2
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
1811.4
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
1798.8
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1791.4
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1783.6
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
1783.5
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
1782.7
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
1780.6
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
1778.8
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
1773.0
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
1771.2
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
1766.0
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
1763.7
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
1763.4
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
1761.4
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1755.9
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
1752.7
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
1745.6
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
1737.7
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
1729.3
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
1724.1
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1720.4
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
1720.3
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
1718.9
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
1718.4
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
1711.3
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
1708.6
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
1706.6
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
1701.4
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
1697.1
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
1686.1
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1682.5
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
1681.2
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1673.4
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
1663.6
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
1660.4
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
1658.9
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
1654.5
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
1653.9
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
1651.7
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
1639.6
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
1638.2
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
1637.1
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
1636.7
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
1635.4
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
1634.7
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
1634.7
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
1633.0
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
1632.5
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
1630.9
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
1618.9
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
1617.4
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
1615.0
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
1614.9
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
1613.5
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
1611.6
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
1610.6
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1605.1
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1604.8
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
1602.8
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
1597.8
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
1597.4
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
1596.9
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1596.6
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
1596.1
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
1594.6
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
1587.8
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
1577.2
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
1576.5
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
1575.9
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1573.1
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
1572.9
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
1570.9
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
1570.4
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1568.6
TCGA-HQ-A2OE-01A
male, alive, 1174 days
1568.0
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
1564.4
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
1556.5
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
1554.7
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
1553.5
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
1553.4
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
1551.0
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
1550.2
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
1546.7
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
1542.8
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
1534.6
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
1528.8
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
1528.2
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
1524.6
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
1523.6
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
1518.8
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
1510.8
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
1510.1
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
1509.6
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
1502.4
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
1502.2
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1499.3
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
1495.7
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
1492.5
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
1492.3
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
1491.2
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1489.4
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
1488.4
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
1484.7
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
1482.1
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
1480.8
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
1480.0
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
1479.4
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
1477.0
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1464.7
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
1459.0
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
1457.9
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
1456.7
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
1456.1
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
1454.9
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
1453.8
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
1451.6
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
1451.2
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
1446.6
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
1446.5
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
1446.0
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
1441.7
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
1440.6
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
1439.4
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
1438.0
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
1435.1
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
1432.1
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
1426.8
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
1422.9
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
1422.3
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
1419.4
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
1418.4
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
1414.2
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
1413.7
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
1412.5
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
1408.2
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
1406.7
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
1404.9
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
1404.9
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
1404.7
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
1402.7
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
1402.6
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
1397.1
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
1394.3
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
1387.2
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
1379.7
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1377.9
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1376.0
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
1369.8
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
1368.2
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
1364.9
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
1363.4
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
1363.0
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
1358.2
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
1356.6
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
1356.5
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
1356.3
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
1354.0
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
1353.5
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
1349.3
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
1348.6
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
1343.0
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
1340.3
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
1337.1
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
1333.4
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
1330.6
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
1328.8
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
1327.6
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
1327.3
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
1320.7
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
1317.2
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
1316.3
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
1316.2
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
1313.4
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
1312.2
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
1306.4
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
1303.7
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1292.5
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
1291.8
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
1289.9
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
1288.5
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
1287.1
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
1284.8
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
1283.4
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
1276.2
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
1267.5
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
1261.7
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
1252.7
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
1244.6
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
1244.4
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
1243.4
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
1241.9
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
1234.2
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
1229.2
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1228.4
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
1224.5
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
1224.1
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
1223.7
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
1218.6
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
1218.1
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
1198.5
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
1198.1
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
1196.0
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
1193.1
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
1190.0
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
1186.3
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
1185.6
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
1185.5
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
1185.5
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1185.1
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
1184.6
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
1184.4
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
1184.2
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
1182.3
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
1180.4
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
1178.6
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
1176.6
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
1171.8
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
1171.7
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
1170.5
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
1169.6
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1168.6
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
1167.9
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
1166.6
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
1158.7
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
1145.9
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
1141.8
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
1131.5
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
1129.1
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
1128.8
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
1118.9
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
1117.4
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
1116.8
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
1113.1
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
1108.6
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
1108.6
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
1105.4
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
1105.3
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1105.3
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1092.4
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
1090.6
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
1090.5
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
1088.9
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
1087.1
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
1084.7
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1083.9
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
1081.4
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
1077.4
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
1077.3
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
1074.0
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
1070.7
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1070.7
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
1068.3
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
1067.1
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
1063.8
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
1055.3
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
1050.1
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
1043.7
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
1043.5
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
1043.3
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
1038.5
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
1033.6
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
1018.8
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
1012.1
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
1004.8
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
1004.7
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
1002.8
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
1000.9
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
994.7
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
993.6
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
985.0
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
982.0
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
980.4
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
976.2
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
969.4
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
969.2
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
968.8
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
966.8
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
960.6
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
945.4
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
944.3
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
935.8
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
935.3
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
931.9
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
930.9
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
926.3
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
921.1
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
915.5
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
913.4
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
906.2
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
903.2
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
902.4
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
899.4
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
892.2
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
891.3
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
890.4
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
886.6
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
878.1
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
872.7
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
872.1
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
871.2
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
870.4
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
869.0
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
859.5
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
857.1
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
847.0
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
846.3
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
828.1
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
819.1
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
809.5
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
797.5
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
794.8
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
792.6
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
773.6
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
773.3
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
769.1
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
767.1
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
765.2
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
755.7
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
740.3
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
736.1
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
732.6
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
710.8
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
694.0
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
657.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
647.2
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
643.0
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
641.1
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
558.6
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
536.4
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
532.0
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
312.9
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
293.5
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.