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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
416.7
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
1239.9
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
1192.0
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
1182.6
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
1147.5
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
1103.3
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
1010.4
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
987.4
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
961.8
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
956.3
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
941.7
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
933.1
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
917.4
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
890.0
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
855.7
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
831.0
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
822.6
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
812.2
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
782.6
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
782.3
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
772.2
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
770.2
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
756.4
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
739.2
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
719.1
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
711.2
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
704.9
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
704.8
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
701.8
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
698.6
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
693.8
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
692.2
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
686.1
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
672.0
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
664.8
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
664.0
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
654.7
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
652.2
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
646.3
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
640.6
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
638.6
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
625.3
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
620.2
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
616.1
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
615.2
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
614.9
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
612.8
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
595.5
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
595.3
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
594.8
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
594.7
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
587.5
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
585.5
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
584.8
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
582.9
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
572.6
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
569.7
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
566.3
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
566.3
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
565.5
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
562.4
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
561.0
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
557.6
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
554.4
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
549.7
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
543.4
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
543.3
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
535.7
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
532.1
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
530.9
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
529.8
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
527.8
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
527.4
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
523.8
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
519.8
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
517.6
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
517.5
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
516.4
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
516.1
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
514.7
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
514.0
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
512.6
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
512.3
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
511.5
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
509.2
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
506.1
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
505.3
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
502.8
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
501.7
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
501.6
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
498.3
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
490.7
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
489.2
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
484.9
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
483.0
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
482.2
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
481.6
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
480.1
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
478.6
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
478.0
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
477.2
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
476.7
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
475.1
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
475.1
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
474.4
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
472.7
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
471.5
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
469.2
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
465.5
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
464.6
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
462.4
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
457.3
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
457.1
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
456.8
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
455.6
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
454.9
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
453.7
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
453.0
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
452.6
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
452.2
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
451.4
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
448.7
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
445.6
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
445.5
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
444.1
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
443.1
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
442.8
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
441.0
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
441.0
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
439.6
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
438.9
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
436.9
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
436.4
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
436.1
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
435.3
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
435.0
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
434.5
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
434.3
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
434.0
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
431.8
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
430.3
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
429.0
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
426.2
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
425.3
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
425.0
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
424.4
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
423.8
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
421.2
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
419.6
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
419.5
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
416.9
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
414.0
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
413.5
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
411.7
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
411.3
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
410.3
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
407.4
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
407.3
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
406.8
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
406.1
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
405.4
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
405.2
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
404.5
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
404.2
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
403.4
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
403.2
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
403.1
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
402.8
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
402.3
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
399.6
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
399.0
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
398.8
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
394.0
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
392.4
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
391.7
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
389.3
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
388.5
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
388.4
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
384.9
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
383.1
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
382.6
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
381.8
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
380.6
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
380.5
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
377.8
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
376.0
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
374.9
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
374.4
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
372.0
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
369.1
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
365.5
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
365.2
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
364.6
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
364.4
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
363.7
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
363.5
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
363.3
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
360.8
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
360.1
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
360.0
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
360.0
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
359.6
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
358.7
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
358.2
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
356.3
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
355.9
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
355.3
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
353.0
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
352.6
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
351.5
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
350.3
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
349.1
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
348.4
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
348.1
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
347.9
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
345.8
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
343.5
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
340.1
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
339.6
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
339.3
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
339.0
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
336.9
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
335.6
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
333.4
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
330.7
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
330.6
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
330.6
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
330.4
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
329.6
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
329.0
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
327.3
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
324.1
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
323.5
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
321.7
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
320.3
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
317.5
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
314.4
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
314.0
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
311.3
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
311.0
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
310.2
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
309.5
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
308.2
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
306.9
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
306.2
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
304.8
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
304.6
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
304.5
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
304.2
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
299.3
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
298.7
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
297.4
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
296.1
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
295.7
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
293.6
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
293.4
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
292.0
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
291.8
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
290.6
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
289.6
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
289.3
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
286.5
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
286.5
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
286.1
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
284.4
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
283.9
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
283.6
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
280.0
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
277.4
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
277.1
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
273.2
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
272.2
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
272.1
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
272.0
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
271.6
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
269.8
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
269.0
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
265.1
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
263.9
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
263.3
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
263.2
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
262.9
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
262.2
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
261.5
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
261.4
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
261.3
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
261.3
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
260.8
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
260.3
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
259.4
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
258.4
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
257.4
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
256.4
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
255.7
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
252.6
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
252.4
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
251.6
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
251.5
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
251.2
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
250.8
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
247.7
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
247.3
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
246.2
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
245.8
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
244.3
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
244.3
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
239.3
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
238.8
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
238.8
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
238.4
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
234.7
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
234.0
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
229.5
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
229.3
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
229.2
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
225.7
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
223.8
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
222.6
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
219.4
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
214.2
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
209.7
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
208.1
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
206.4
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
205.2
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
204.8
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
204.3
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
200.4
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
196.1
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
194.8
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
193.7
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
193.1
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
193.1
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
192.6
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
190.5
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
189.2
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
188.8
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
186.4
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
181.5
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
178.4
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
178.0
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
177.0
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
173.3
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
163.0
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
154.1
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
152.6
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
150.0
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
149.4
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
146.8
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
144.6
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
141.0
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
140.6
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
131.6
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
131.2
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
123.5
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
96.2
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.