Expression of MT-ND6 in pancreatic cancer

PANCREATIC CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-ND6 is not prognostic in pancreatic cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 1492.64
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

2075.2

Number of samples

176

Samples

Sample	Description	FPKM
TCGA-FB-AAPY-01A	71 years, male, white, stage:iib, dead, 1059 days	7364.1
TCGA-FB-AAQ3-01A	65 years, female, white, stage:iib, dead, 31 days	6016.4
TCGA-HV-A5A5-01A	61 years, female, asian, stage:iib, alive, 289 days	5328.0
TCGA-HZ-8315-01A	54 years, female, white, stage:iia, dead, 299 days	5262.7
TCGA-FB-AAQ0-01A	68 years, male, white, stage:iia, dead, 473 days	4699.4
TCGA-HV-AA8V-01A	50 years, male, asian, stage:iib, alive, 920 days	4673.8
TCGA-H8-A6C1-01A	53 years, male, white, stage:iia, alive, 671 days	4649.3
TCGA-M8-A5N4-01A	48 years, female, stage:iia, alive, 584 days	4473.5
TCGA-3A-A9IL-01A	39 years, female, white, stage:i, alive, 2741 days	4308.2
TCGA-IB-7649-01A	73 years, female, stage:iib, dead, 467 days	4225.3
TCGA-Q3-AA2A-01A	64 years, female, white, stage:ib, alive, 95 days	4165.0
TCGA-2J-AABK-01A	71 years, male, white, stage:iib, alive, 484 days	4113.8
TCGA-3A-A9IN-01A	62 years, female, white, stage:ib, alive, 2084 days	4005.2
TCGA-LB-A7SX-01A	74 years, female, black or african american, stage:iib, dead, 393 days	3846.0
TCGA-HZ-8638-01A	84 years, female, white, stage:ia, dead, 151 days	3813.8
TCGA-US-A779-01A	54 years, female, white, stage:iib, dead, 511 days	3703.0
TCGA-3A-A9IO-01A	56 years, male, white, alive, 1942 days	3677.7
TCGA-HV-A5A3-01A	50 years, male, asian, stage:iia, dead, 128 days	3665.6
TCGA-3A-A9I9-01A	67 years, male, white, stage:iia, dead, 634 days	3663.7
TCGA-2J-AABT-01A	72 years, female, white, stage:iib, alive, 319 days	3661.6
TCGA-HZ-A4BK-01A	72 years, male, white, stage:iib, alive, 657 days	3656.9
TCGA-3A-A9I7-01A	45 years, male, black or african american, stage:iib, alive, 1323 days	3637.5
TCGA-Q3-A5QY-01A	58 years, male, white, stage:iib, alive, 416 days	3600.2
TCGA-2L-AAQE-01A	56 years, male, white, stage:iib, dead, 684 days	3543.5
TCGA-2J-AABH-01A	61 years, male, white, stage:iia, alive, 1287 days	3478.8
TCGA-HZ-A49G-01A	58 years, female, white, stage:iib, alive, 660 days	3477.4
TCGA-S4-A8RP-01A	77 years, female, white, stage:iib, dead, 702 days	3422.8
TCGA-IB-AAUO-01A	64 years, female, white, stage:iib, dead, 239 days	3321.1
TCGA-2J-AABO-01A	43 years, male, white, stage:iib, alive, 440 days	3229.7
TCGA-HZ-A77P-01A	77 years, male, white, stage:iib, alive, 330 days	3132.3
TCGA-XD-AAUI-01A	50 years, female, white, stage:iib, dead, 366 days	3074.9
TCGA-3A-A9IR-01A	64 years, female, white, stage:ib, alive, 1542 days	3055.6
TCGA-FB-A545-01A	72 years, female, white, stage:iib, dead, 732 days	3041.3
TCGA-HZ-8637-01A	76 years, female, white, stage:iib, dead, 517 days	2987.3
TCGA-HZ-A49H-01A	68 years, female, white, stage:iib, alive, 491 days	2977.2
TCGA-3E-AAAY-01A	67 years, male, white, stage:iib, alive, 2285 days	2977.2
TCGA-2J-AABA-01A	55 years, male, white, stage:iib, dead, 607 days	2940.2
TCGA-IB-A5SO-01A	71 years, male, white, stage:iib, dead, 365 days	2911.7
TCGA-3A-A9IX-01A	40 years, male, white, stage:ia, alive, 1037 days	2840.6
TCGA-FB-A78T-01A	71 years, female, white, stage:iib, dead, 375 days	2812.1
TCGA-2J-AABE-01A	73 years, male, white, stage:iia, alive, 676 days	2804.0
TCGA-XD-AAUH-01A	57 years, female, white, stage:iib, alive, 395 days	2790.5
TCGA-2L-AAQJ-01A	49 years, female, white, stage:iii, dead, 394 days	2743.1
TCGA-2L-AAQL-01A	82 years, male, white, stage:iib, dead, 292 days	2721.4
TCGA-HV-A5A4-01A	72 years, female, asian, stage:iia, alive, 232 days	2704.5
TCGA-XN-A8T5-01A	53 years, female, white, stage:ib, alive, 720 days	2613.2
TCGA-H6-A45N-01A	88 years, female, white, stage:iib, dead, 421 days	2598.1
TCGA-FB-A4P5-01A	69 years, female, white, stage:iib, dead, 179 days	2554.5
TCGA-2J-AABR-01A	60 years, female, white, stage:iia, alive, 438 days	2511.6
TCGA-2L-AAQI-01A	66 years, male, white, stage:iib, dead, 103 days	2492.1
TCGA-FB-AAQ1-01A	49 years, male, white, stage:iib, dead, 123 days	2487.1
TCGA-IB-AAUW-01A	63 years, female, white, stage:iib, dead, 230 days	2481.8
TCGA-2L-AAQM-01A	52 years, male, white, stage:iib, alive, 1383 days	2479.1
TCGA-F2-A44G-01A	79 years, female, white, stage:iib, dead, 233 days	2477.3
TCGA-3A-A9J0-01A	75 years, male, white, stage:iib, alive, 743 days	2460.8
TCGA-US-A77G-01A	64 years, male, white, stage:iib, dead, 12 days	2438.4
TCGA-IB-7887-01A	62 years, female, white, stage:iib, dead, 110 days	2366.3
TCGA-IB-7645-01A	44 years, female, stage:iib, dead, 1502 days	2358.2
TCGA-IB-7885-01A	78 years, female, white, stage:iib, alive, 1257 days	2340.6
TCGA-3A-A9IH-01A	66 years, female, white, stage:ia, alive, 1021 days	2333.2
TCGA-IB-AAUQ-01A	50 years, male, white, stage:iib, dead, 183 days	2327.2
TCGA-XD-AAUL-01A	56 years, male, white, stage:iia, alive, 498 days	2309.8
TCGA-HZ-8001-01A	69 years, male, white, stage:iii, alive, 706 days	2302.7
TCGA-XD-AAUG-01A	66 years, female, white, stage:iv, alive, 420 days	2296.5
TCGA-3A-A9IU-01A	65 years, male, white, stage:iib, dead, 458 days	2255.7
TCGA-HZ-7923-01A	65 years, male, white, stage:iia, alive, 314 days	2222.1
TCGA-HV-A7OL-01A	70 years, male, asian, stage:iia, alive, 252 days	2192.0
TCGA-2J-AABU-01A	56 years, male, white, stage:iib, dead, 277 days	2168.2
TCGA-XN-A8T3-01A	67 years, male, white, stage:ib, alive, 951 days	2167.4
TCGA-HZ-A49I-01A	77 years, male, white, stage:iib, dead, 308 days	2166.5
TCGA-3A-A9IV-01A	59 years, female, white, stage:ib, alive, 1103 days	2164.4
TCGA-FB-AAPZ-01A	54 years, male, white, stage:iib, alive, 716 days	2156.2
TCGA-YH-A8SY-01A	73 years, female, white, alive, 388 days	2136.6
TCGA-FB-AAQ6-01A	85 years, male, white, stage:ia, dead, 244 days	2133.9
TCGA-HZ-7289-01A	77 years, male, white, stage:iib, dead, 661 days	2110.2
TCGA-H6-8124-01A	56 years, female, white, stage:iib, alive, 392 days	2109.3
TCGA-US-A77J-01A	81 years, female, white, stage:iib, dead, 568 days	2099.1
TCGA-US-A77E-01A	73 years, male, white, stage:iib, dead, 430 days	2085.6
TCGA-HV-A5A6-01A	65 years, female, asian, stage:iib, dead, 2036 days	2065.0
TCGA-FB-AAPS-01A	62 years, female, white, stage:iib, alive, 228 days	2054.2
TCGA-IB-A6UF-01A	63 years, male, white, stage:iib, alive, 666 days	2023.5
TCGA-HZ-8317-01A	69 years, female, white, stage:iib, dead, 378 days	2007.5
TCGA-IB-7890-01A	73 years, male, stage:ib, dead, 598 days	1931.4
TCGA-IB-A5SP-01A	77 years, male, white, stage:iia, alive, 482 days	1927.1
TCGA-IB-7652-01A	49 years, female, asian, stage:iib, alive, 1116 days	1892.9
TCGA-HZ-8519-01A	73 years, male, white, stage:ia, alive, 454 days	1854.6
TCGA-3A-A9IB-01A	69 years, female, white, stage:iib, dead, 224 days	1830.4
TCGA-IB-8126-01A	80 years, female, white, stage:iii, alive, 462 days	1811.9
TCGA-IB-7889-01A	86 years, female, white, stage:iib, dead, 481 days	1804.7
TCGA-FB-A4P6-01A	54 years, male, white, stage:iib, alive, 767 days	1781.4
TCGA-IB-AAUV-01A	49 years, male, white, stage:iib, alive, 404 days	1775.7
TCGA-3A-A9IS-01A	67 years, male, white, stage:ib, alive, 998 days	1751.9
TCGA-HZ-A77Q-01A	55 years, female, white, stage:iib, alive, 33 days	1745.0
TCGA-IB-8127-01A	59 years, male, white, stage:iib, alive, 522 days	1724.3
TCGA-HZ-7920-01A	71 years, male, white, stage:ib, dead, 236 days	1716.7
TCGA-US-A776-01A	61 years, male, white, stage:iia, alive, 1216 days	1715.2
TCGA-HZ-8002-01A	61 years, male, white, stage:iib, dead, 366 days	1697.1
TCGA-HZ-A8P1-01A	81 years, male, white, stage:ib, alive, 7 days	1687.1
TCGA-RL-AAAS-01A	60 years, female, white, stage:ib, alive, 9 days	1663.8
TCGA-HZ-7924-01A	60 years, female, white, stage:iia, alive, 840 days	1656.5
TCGA-2J-AABI-01A	55 years, female, white, stage:iia, alive, 969 days	1650.4
TCGA-HZ-A4BH-01A	75 years, male, white, stage:iib, alive, 194 days	1644.0
TCGA-3A-A9IC-01A	61 years, female, white, stage:iib, dead, 738 days	1623.9
TCGA-HZ-7926-01A	57 years, male, black or african american, stage:iib, dead, 518 days	1603.4
TCGA-RB-AA9M-01A	43 years, male, white, stage:iib, alive, 286 days	1582.6
TCGA-HZ-A77O-01A	77 years, female, white, stage:iib, dead, 160 days	1575.5
TCGA-HZ-8636-01A	58 years, female, white, stage:iv, dead, 545 days	1568.0
TCGA-IB-AAUP-01A	68 years, male, white, stage:iib, alive, 431 days	1553.6
TCGA-S4-A8RO-01A	75 years, female, white, stage:iib, alive, 525 days	1552.2
TCGA-IB-AAUM-01A	76 years, male, white, stage:iib, alive, 8 days	1540.2
TCGA-S4-A8RM-01A	67 years, male, white, stage:iib, alive, 737 days	1518.8
TCGA-IB-AAUT-01A	65 years, male, white, stage:iib, alive, 287 days	1498.2
TCGA-IB-A5SQ-01A	56 years, female, white, stage:ib, dead, 219 days	1487.0
TCGA-IB-AAUR-01A	67 years, male, white, stage:iib, alive, 338 days	1485.4
TCGA-IB-AAUN-01A	74 years, female, white, stage:ib, dead, 144 days	1431.3
TCGA-IB-7897-01A	54 years, female, white, stage:iib, dead, 486 days	1421.1
TCGA-3A-A9I5-01A	58 years, male, white, alive, 1794 days	1415.7
TCGA-US-A774-01A	76 years, female, white, stage:iib, dead, 695 days	1406.7
TCGA-F2-7276-01A	64 years, male, white, stage:iib, dead, 216 days	1390.7
TCGA-2J-AABF-01A	73 years, male, white, stage:iib, dead, 691 days	1375.3
TCGA-HZ-7919-01A	52 years, female, white, stage:iib, dead, 593 days	1351.0
TCGA-IB-7644-01A	65 years, female, white, stage:iv, dead, 394 days	1350.5
TCGA-2J-AAB1-01A	65 years, male, white, stage:iib, dead, 66 days	1338.1
TCGA-IB-A5ST-01A	64 years, female, white, stage:iib, alive, 635 days	1335.0
TCGA-RB-A7B8-01A	81 years, female, white, stage:iib, dead, 466 days	1267.9
TCGA-YY-A8LH-01A	61 years, female, white, stage:iib, alive, 2016 days	1264.4
TCGA-L1-A7W4-01A	48 years, female, white, stage:iib, dead, 278 days	1250.4
TCGA-HZ-A9TJ-01A	70 years, male, white, stage:iv, alive, 603 days	1249.5
TCGA-F2-6880-01A	70 years, male, white, stage:iib, alive, 289 days	1225.5
TCGA-FB-A7DR-01A	48 years, male, asian, stage:iia, dead, 353 days	1187.2
TCGA-IB-7646-01A	60 years, male, white, stage:iib, dead, 145 days	1173.1
TCGA-IB-AAUS-01A	84 years, female, white, stage:iib, alive, 225 days	1159.4
TCGA-F2-A7TX-01A	77 years, male, white, stage:iib, dead, 95 days	1147.4
TCGA-IB-7888-01A	66 years, female, black or african american, stage:iia, dead, 1332 days	1129.3
TCGA-2L-AAQA-01A	76 years, male, white, stage:iib, dead, 143 days	1127.2
TCGA-IB-A6UG-01A	65 years, male, white, stage:iib, dead, 41 days	1123.3
TCGA-IB-7651-01A	64 years, female, white, stage:iib, dead, 603 days	1097.8
TCGA-F2-A44H-01A	65 years, male, white, stage:iia, alive, 586 days	1090.6
TCGA-IB-AAUU-01A	35 years, male, white, stage:iib, alive, 245 days	1081.4
TCGA-FB-AAPU-01A	41 years, female, asian, stage:iia, dead, 381 days	1073.1
TCGA-FB-A5VM-01A	74 years, male, white, stage:ib, dead, 498 days	1037.4
TCGA-IB-A5SS-01A	64 years, female, white, stage:iib, dead, 460 days	1031.8
TCGA-FB-AAPP-01A	71 years, male, white, stage:iib, dead, 485 days	1021.2
TCGA-2J-AABV-01A	74 years, male, white, stage:iib, dead, 652 days	1007.0
TCGA-2J-AAB4-01A	48 years, male, white, stage:iib, alive, 729 days	994.5
TCGA-3A-A9IJ-01A	65 years, male, white, stage:ib, alive, 1854 days	993.8
TCGA-LB-A9Q5-01A	63 years, female, white, stage:iib, dead, 313 days	970.7
TCGA-HV-AA8X-01A	75 years, female, asian, stage:iib, dead, 532 days	966.5
TCGA-PZ-A5RE-01A	44 years, female, white, stage:iib, dead, 470 days	943.4
TCGA-IB-7891-01A	49 years, female, white, stage:iib, dead, 913 days	919.7
TCGA-FB-AAPQ-01A	65 years, male, white, stage:iib, dead, 1130 days	917.7
TCGA-Z5-AAPL-01A	74 years, female, white, stage:iia, alive, 467 days	885.0
TCGA-HZ-8003-01A	65 years, female, white, stage:iib, dead, 596 days	874.9
TCGA-HZ-7922-01A	61 years, female, white, stage:iib, alive, 4 days	866.7
TCGA-2J-AAB6-01A	75 years, male, white, stage:iia, dead, 293 days	851.9
TCGA-FB-AAQ2-01A	81 years, female, white, stage:iib, dead, 153 days	841.0
TCGA-YB-A89D-01A	59 years, male, white, stage:iib, alive, 350 days	830.9
TCGA-IB-7654-01A	80 years, male, white, stage:iib, dead, 476 days	827.8
TCGA-HZ-8005-01A	81 years, male, white, stage:iib, dead, 120 days	820.6
TCGA-HZ-7925-01A	66 years, male, white, stage:iib, dead, 614 days	814.8
TCGA-3E-AAAZ-01A	71 years, male, white, stage:iia, dead, 2182 days	791.3
TCGA-HZ-7918-01A	72 years, male, white, stage:iib, alive, 969 days	763.2
TCGA-OE-A75W-01A	75 years, male, white, stage:iia, dead, 267 days	715.5
TCGA-IB-A7M4-01A	81 years, male, white, stage:iib, alive, 483 days	713.8
TCGA-LB-A8F3-01A	64 years, female, black or african american, stage:iia, alive, 379 days	694.1
TCGA-F2-7273-01A	54 years, male, black or african american, stage:iib, dead, 592 days	640.8
TCGA-IB-7893-01A	64 years, male, white, stage:iia, dead, 117 days	583.9
TCGA-IB-A7LX-01A	57 years, male, white, stage:iib, dead, 250 days	535.0
TCGA-3A-A9IZ-01A	47 years, male, white, stage:iib, dead, 308 days	519.8
TCGA-2J-AAB9-01A	71 years, female, white, stage:iib, dead, 627 days	506.4
TCGA-HV-A7OP-01A	72 years, male, asian, stage:iib, alive, 978 days	478.1
TCGA-F2-A8YN-01A	76 years, male, white, stage:iia, alive, 517 days	464.2
TCGA-2J-AAB8-01A	71 years, male, white, stage:iib, alive, 80 days	385.6
TCGA-F2-6879-01A	57 years, male, white, stage:iib, dead, 334 days	372.1
TCGA-IB-7886-01A	80 years, male, white, stage:iib, dead, 123 days	335.7
TCGA-2J-AABP-01A	58 years, female, white, stage:iib, alive, 463 days	270.9
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PANCREATIC CANCER - Protein expressionⁱ

Pending cancer tissue analysis