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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
2573.7
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
28519.9
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
22626.2
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
16643.7
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
14024.9
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
12176.5
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
12071.2
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
11552.2
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
11510.9
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
11413.5
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
11293.6
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
10569.1
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
9886.0
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
9285.8
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
8807.5
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
8703.0
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
8254.6
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
8069.4
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
8041.8
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
7848.7
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
7845.6
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
7705.5
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
7312.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
7242.2
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
7096.1
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
6926.0
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
6817.5
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
6722.8
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
6373.4
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
6016.7
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
6015.5
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
5956.8
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
5828.5
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
5793.9
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
5728.8
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
5669.4
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
5652.7
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
5432.6
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
5345.3
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
5157.0
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
5106.3
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
5093.8
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
4878.1
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
4871.1
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
4836.4
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
4751.9
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
4743.6
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
4735.7
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
4728.2
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
4624.4
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
4613.7
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
4607.7
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
4583.0
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
4471.8
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
4466.8
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
4451.2
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
4419.6
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
4373.8
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
4309.1
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
4255.8
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
4215.4
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
4194.1
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
4187.1
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
4140.1
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
4118.3
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
4083.8
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
4013.1
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
3994.2
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
3986.9
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
3976.7
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
3974.5
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
3963.2
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
3932.0
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
3809.5
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
3805.8
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
3800.1
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
3793.2
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
3776.9
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
3758.7
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
3758.5
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
3750.0
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
3746.9
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
3711.3
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
3691.3
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
3686.2
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
3662.1
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
3645.9
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
3642.5
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
3619.6
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
3613.8
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
3591.7
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
3524.8
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
3487.4
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
3406.4
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
3380.3
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
3366.9
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
3322.4
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
3306.8
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
3209.8
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
3192.6
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
3181.4
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
3152.7
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
3063.2
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
3013.7
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
2998.5
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
2971.5
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
2945.4
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
2930.7
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
2926.7
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
2926.2
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
2873.5
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
2854.6
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
2836.7
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
2829.7
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
2808.1
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
2797.8
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
2792.3
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
2779.0
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
2762.2
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
2761.3
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
2731.5
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
2697.7
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
2686.6
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
2672.1
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
2664.9
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
2656.9
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
2655.9
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
2655.5
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
2640.2
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
2637.1
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
2621.5
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
2617.5
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
2614.5
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
2603.1
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
2585.3
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
2574.2
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
2573.5
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
2563.0
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
2556.8
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
2543.0
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
2537.6
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
2537.0
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
2513.2
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
2491.0
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
2481.1
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
2474.5
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
2467.9
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
2463.3
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
2462.0
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
2453.7
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
2439.9
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
2418.4
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
2417.3
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
2414.5
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
2406.1
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
2405.5
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
2404.7
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
2395.4
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
2376.9
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
2355.7
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
2352.9
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
2345.6
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
2341.4
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
2329.5
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
2289.0
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
2258.1
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
2240.3
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
2229.7
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
2228.3
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
2210.6
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
2208.5
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
2206.1
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
2202.9
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
2192.4
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
2184.7
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
2167.1
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
2154.5
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
2145.2
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
2137.0
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
2128.8
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
2118.8
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
2116.7
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
2100.8
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
2088.8
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
2080.0
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
2077.5
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
2068.6
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
2029.3
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
2023.1
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
2009.8
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1988.7
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
1977.0
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1964.1
TCGA-HQ-A2OE-01A
male, alive, 1174 days
1942.0
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1936.6
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1919.6
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
1916.6
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1854.2
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
1845.1
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
1832.9
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
1827.7
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
1825.6
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
1816.7
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1802.8
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
1791.7
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1788.2
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
1780.3
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
1779.4
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
1766.1
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1754.8
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
1752.7
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
1741.7
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
1740.4
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
1737.9
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1730.0
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
1726.6
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
1722.7
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
1716.5
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
1715.1
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
1698.3
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
1692.9
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
1688.0
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
1686.8
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1675.6
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
1653.4
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
1622.6
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
1614.6
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
1595.0
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
1588.6
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
1587.2
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1586.8
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
1578.5
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
1576.6
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
1572.8
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
1570.2
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
1569.0
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1549.8
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
1521.6
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1519.7
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
1514.5
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
1510.6
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
1508.7
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
1508.2
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
1503.4
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
1494.4
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
1468.5
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
1456.5
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1455.6
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
1452.7
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
1445.6
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
1416.1
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
1394.9
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
1381.7
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
1362.4
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
1356.4
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
1356.0
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
1345.2
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
1342.6
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
1341.6
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
1307.1
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
1281.5
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
1278.9
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
1277.4
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
1271.8
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
1261.9
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
1244.9
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
1244.4
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
1235.7
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
1234.4
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
1223.9
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
1204.5
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
1202.2
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
1202.0
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
1197.3
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
1196.9
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
1196.2
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
1175.7
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
1175.6
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
1170.9
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
1161.2
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
1153.0
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1143.6
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
1134.7
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
1120.5
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
1115.3
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
1104.2
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
1101.2
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
1094.6
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
1077.5
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1067.1
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
1058.5
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
1045.7
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
1038.0
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
1033.9
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
1033.4
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
1030.7
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
1026.1
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1023.5
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
1022.9
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
1018.4
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
1010.1
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
1004.5
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
984.1
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
974.2
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
949.7
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
942.9
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
937.9
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
929.2
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
928.6
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
916.0
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
915.6
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
911.2
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
904.5
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
897.5
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
897.0
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
879.7
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
859.0
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
855.5
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
847.6
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
837.3
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
833.7
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
831.8
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
826.5
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
825.0
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
823.1
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
793.3
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
787.6
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
765.9
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
765.2
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
754.3
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
743.5
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
724.8
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
708.2
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
700.0
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
698.4
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
697.8
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
690.0
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
684.3
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
673.8
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
669.1
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
651.4
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
650.4
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
646.9
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
630.8
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
626.6
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
626.1
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
616.9
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
605.3
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
603.1
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
599.3
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
598.8
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
598.0
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
594.7
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
577.3
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
570.0
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
555.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
550.9
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
538.6
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
531.3
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
500.4
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
493.1
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
488.8
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
471.4
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
470.0
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
467.0
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
465.9
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
438.3
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
428.8
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
408.1
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
404.2
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
403.1
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
401.8
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
388.2
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
377.7
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
373.1
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
361.0
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
350.5
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
335.5
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
318.9
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
308.4
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
299.9
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
293.5
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
288.3
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
275.6
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
270.5
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
263.4
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
259.1
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
242.0
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
231.3
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
224.4
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
211.8
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
206.1
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
200.4
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
198.3
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
196.0
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
176.9
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
176.8
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
173.9
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
166.0
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
150.3
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
138.1
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
126.4
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
120.7
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
103.5
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
99.1
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
76.7
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
75.3
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.