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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1123.4
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
4083.0
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
3890.9
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
3775.9
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
3645.5
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
3623.5
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
3485.4
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
3475.2
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
3447.7
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
3358.7
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
3276.0
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
3177.6
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
3130.2
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
3049.4
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2879.8
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
2778.5
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
2773.8
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
2748.5
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
2648.5
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
2565.4
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
2561.3
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
2560.6
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
2540.3
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
2479.2
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
2430.3
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
2419.2
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
2415.7
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
2412.7
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
2407.2
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
2377.4
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
2334.5
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
2323.3
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
2305.8
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
2233.0
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
2127.9
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
2117.5
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
2093.6
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
2081.9
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
2079.6
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
2033.7
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
2025.1
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
2005.4
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
2003.2
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
1984.0
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
1982.9
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
1947.3
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
1933.9
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
1923.3
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
1884.2
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
1833.7
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
1831.4
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
1791.8
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
1773.9
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
1759.9
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
1754.0
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
1744.8
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
1715.6
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
1688.2
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
1687.8
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
1678.9
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
1653.6
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
1644.5
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
1631.5
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
1618.8
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
1615.8
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
1612.6
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
1605.7
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
1604.0
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
1590.5
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
1582.2
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
1577.3
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
1573.9
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
1566.3
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
1533.2
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
1524.7
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
1524.3
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
1507.0
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
1497.1
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
1496.3
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
1486.2
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
1479.3
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
1475.5
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
1452.7
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
1450.7
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
1449.7
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
1449.5
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
1439.7
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
1436.2
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
1428.5
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
1428.3
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
1419.2
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
1414.2
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
1410.0
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
1407.4
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
1399.9
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
1398.7
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
1390.9
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
1373.4
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
1370.6
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
1360.7
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
1328.9
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
1325.1
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
1321.1
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
1317.2
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
1316.3
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
1312.0
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
1309.0
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
1308.0
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
1298.1
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
1290.0
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
1288.9
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
1278.4
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
1261.8
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
1258.6
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
1241.0
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
1237.2
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
1235.1
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
1231.4
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
1223.1
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
1219.3
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
1210.9
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
1210.0
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
1209.0
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
1206.3
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
1199.5
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
1181.0
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
1175.5
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
1173.6
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
1173.0
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
1172.4
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
1171.1
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
1164.5
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
1159.8
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
1154.9
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
1148.9
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
1146.5
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
1124.1
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
1106.2
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
1105.3
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
1102.3
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
1102.0
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
1101.1
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
1092.1
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
1091.1
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
1085.5
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
1079.9
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
1075.2
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
1061.9
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
1057.3
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
1056.0
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
1046.1
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
1043.7
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
1042.7
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
1027.4
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
1026.2
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
1022.7
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
1016.1
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
1016.1
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
1014.4
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
1005.2
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
1004.4
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
993.9
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
993.8
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
993.7
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
992.3
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
986.7
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
984.0
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
979.4
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
974.6
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
971.8
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
969.9
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
969.8
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
967.5
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
963.5
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
962.0
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
961.7
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
960.5
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
943.6
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
928.6
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
924.5
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
919.7
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
919.0
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
915.6
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
898.2
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
890.5
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
889.8
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
882.4
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
873.4
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
872.4
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
869.7
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
869.1
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
858.2
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
853.6
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
851.8
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
849.7
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
846.3
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
840.9
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
838.6
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
838.5
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
835.2
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
834.3
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
830.1
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
820.9
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
813.1
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
812.7
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
806.2
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
803.3
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
799.1
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
794.0
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
790.0
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
789.1
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
786.4
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
782.1
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
775.0
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
767.3
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
766.2
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
763.3
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
759.2
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
756.7
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
754.9
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
754.9
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
753.5
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
751.1
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
750.4
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
743.5
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
739.9
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
737.3
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
737.1
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
733.8
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
733.0
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
731.2
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
731.0
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
729.4
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
727.6
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
714.3
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
713.3
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
705.1
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
698.8
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
695.0
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
695.0
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
692.0
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
691.6
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
687.1
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
686.9
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
686.0
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
682.9
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
680.9
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
679.4
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
678.4
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
677.4
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
676.0
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
670.7
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
663.0
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
655.8
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
654.8
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
653.9
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
647.3
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
642.5
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
637.1
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
635.9
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
631.2
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
629.4
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
628.0
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
623.2
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
623.1
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
623.0
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
620.8
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
609.2
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
607.4
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
606.2
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
594.9
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
588.2
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
586.0
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
582.7
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
573.0
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
572.7
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
571.6
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
571.3
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
568.8
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
568.8
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
568.8
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
566.1
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
565.2
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
564.8
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
563.5
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
556.8
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
548.5
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
540.9
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
540.8
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
524.9
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
520.5
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
517.9
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
515.9
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
502.7
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
497.0
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
493.9
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
489.1
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
485.2
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
480.9
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
480.3
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
480.1
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
479.7
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
476.1
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
474.2
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
473.5
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
468.1
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
464.4
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
455.7
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
453.7
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
434.1
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
431.2
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
430.0
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
429.5
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
427.7
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
424.5
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
424.4
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
422.3
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
418.3
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
416.7
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
416.5
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
414.2
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
410.7
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
407.5
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
404.2
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
403.3
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
401.3
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
400.3
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
398.2
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
396.9
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
383.3
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
372.2
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
363.7
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
362.7
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
359.1
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
336.7
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
328.2
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
327.9
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
320.1
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
306.9
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
304.8
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
303.8
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
284.8
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
283.4
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
280.5
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
273.5
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
236.2
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
233.6
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
223.4
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
203.4
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
197.5
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
192.2
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
179.4
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
175.5
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
170.2
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
138.3
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.