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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1246.4
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
4370.3
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
4033.4
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
3919.1
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
3803.6
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
3556.0
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
3430.1
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
3428.6
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
3339.4
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
3211.8
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
3163.6
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
3153.1
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
3039.3
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
3010.1
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
2968.9
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
2927.2
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
2797.8
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
2770.1
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
2759.8
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
2756.0
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
2733.2
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
2721.1
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
2718.2
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
2699.3
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
2686.4
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
2678.1
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
2672.7
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
2642.3
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
2581.2
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
2544.9
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
2414.9
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
2363.5
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
2358.3
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
2348.4
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
2347.1
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
2338.7
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
2282.8
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
2281.4
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
2266.8
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
2254.1
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
2244.9
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
2241.9
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
2224.8
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
2220.5
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
2200.2
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
2178.2
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
2160.7
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
2139.6
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
2086.0
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
2076.3
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
2074.9
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
2057.2
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
2052.7
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
2014.6
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
2002.7
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
2002.0
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
1989.3
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
1978.7
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
1977.1
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
1970.8
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
1970.0
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
1966.8
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
1963.4
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
1961.8
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
1959.0
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
1936.5
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
1936.4
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1934.7
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
1933.7
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
1922.9
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
1914.4
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
1909.4
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
1907.5
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1904.6
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
1903.0
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
1900.4
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
1883.1
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
1867.4
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1865.9
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1857.0
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
1855.9
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
1852.4
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
1847.1
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
1844.1
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
1838.0
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1831.6
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
1824.7
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1818.4
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
1817.6
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
1814.8
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
1814.1
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
1813.1
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
1813.0
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
1809.3
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
1808.9
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
1807.3
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
1805.7
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
1801.9
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
1777.2
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
1775.5
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1766.0
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
1765.4
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
1755.4
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
1730.0
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1709.9
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
1696.5
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
1685.9
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
1682.0
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
1681.9
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
1669.0
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1668.8
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
1668.0
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
1660.9
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1652.4
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
1648.2
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
1647.8
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
1647.2
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1642.1
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
1640.9
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
1634.4
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
1624.0
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
1615.7
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
1608.4
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
1601.9
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
1593.1
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1583.5
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
1567.6
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
1566.4
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
1559.7
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
1558.4
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
1555.3
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
1551.7
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
1528.0
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
1524.4
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
1523.1
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
1513.4
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
1503.2
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
1501.7
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
1499.4
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
1491.1
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
1482.7
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
1482.4
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
1479.2
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
1465.3
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1457.0
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
1451.8
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
1427.3
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
1425.3
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
1423.7
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
1415.3
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
1412.0
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
1405.4
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
1405.2
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
1403.1
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
1397.7
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
1391.5
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
1389.3
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
1371.3
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
1368.9
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
1368.7
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
1368.0
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
1366.2
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
1365.0
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
1357.3
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
1350.5
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
1347.6
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
1340.0
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
1338.4
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1338.4
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
1336.3
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
1334.0
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
1333.3
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1332.5
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
1331.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
1327.6
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
1316.6
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
1314.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
1312.2
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
1309.2
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
1307.9
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1280.5
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
1276.4
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
1273.2
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
1265.7
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
1265.5
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1264.6
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
1264.2
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1259.2
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
1258.5
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
1252.1
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1244.2
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
1243.4
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
1242.2
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
1240.0
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
1233.2
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
1229.8
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
1229.3
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
1229.3
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
1227.0
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
1223.2
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
1221.1
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
1217.6
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
1213.8
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
1204.7
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
1204.6
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1203.0
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
1202.3
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
1192.0
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
1188.6
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
1184.0
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1181.6
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1179.7
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
1170.8
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
1156.4
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
1156.0
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
1154.5
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
1150.6
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
1140.2
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
1139.8
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1139.2
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
1136.0
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
1127.1
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
1126.2
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
1119.0
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
1116.0
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
1115.3
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
1107.5
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
1099.3
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
1089.5
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
1077.6
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
1061.9
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
1061.4
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
1048.1
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
1047.4
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
1045.1
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
1025.3
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
1024.4
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
1008.5
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
1007.7
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
997.3
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
994.3
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
985.4
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
981.4
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
977.2
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
974.1
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
966.9
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
960.0
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
958.5
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
957.5
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
950.9
TCGA-HQ-A2OE-01A
male, alive, 1174 days
945.6
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
945.4
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
943.5
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
940.4
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
940.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
938.3
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
929.6
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
929.0
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
926.7
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
926.0
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
916.6
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
915.6
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
909.4
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
902.2
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
901.0
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
898.4
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
898.4
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
895.1
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
884.8
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
878.7
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
874.6
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
870.3
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
861.9
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
860.0
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
858.1
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
855.9
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
853.0
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
840.4
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
830.0
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
826.9
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
826.2
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
825.9
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
822.5
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
812.6
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
807.3
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
800.8
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
799.0
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
793.7
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
791.9
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
786.2
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
784.7
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
768.9
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
759.2
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
755.8
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
755.5
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
754.7
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
726.9
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
713.2
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
711.9
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
711.7
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
690.7
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
689.9
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
687.0
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
685.9
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
681.4
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
676.9
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
675.0
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
674.7
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
674.3
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
669.8
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
652.9
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
642.8
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
634.5
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
610.2
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
601.5
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
596.1
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
583.1
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
581.5
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
581.3
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
579.2
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
571.3
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
557.6
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
557.1
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
556.2
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
554.5
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
551.5
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
547.7
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
539.9
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
537.3
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
536.2
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
535.8
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
533.0
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
531.9
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
531.3
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
529.6
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
526.8
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
524.4
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
509.5
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
475.8
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
473.4
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
470.8
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
416.7
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
402.7
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
402.6
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
392.6
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
379.8
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
376.3
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
357.6
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
357.1
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
354.0
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
326.5
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
323.0
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
318.1
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
315.1
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
305.7
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
281.6
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
274.6
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
272.6
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
269.4
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
251.9
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
251.2
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
250.2
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
249.2
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
245.9
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
245.5
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
238.9
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
231.9
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
231.0
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
222.4
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
206.1
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
200.0
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
186.1
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
159.2
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
156.6
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
152.6
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
136.7
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
130.0
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
128.4
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
120.3
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
113.9
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
105.4
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
87.0
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
76.4
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
70.9
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
64.8
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
62.7
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
61.5
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
47.8
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
33.0
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
23.5
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
20.6
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
20.0
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
15.4
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
14.8
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
13.5
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
9.8
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
7.9
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
5.7
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
3.4
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
3.1
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
2.9
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
1.9
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
0.7
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
0.7
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
0.7
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
0.6
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
0.2
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.