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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
12663.1
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
48585.5
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
43934.0
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
38834.8
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
36935.5
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
33451.8
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
33163.2
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
31566.8
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
30853.3
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
30852.9
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
29717.8
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
29399.5
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
29060.2
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
29024.4
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
28978.4
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
27654.5
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
27108.4
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
27081.5
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
26720.7
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
26576.9
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
26272.1
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
26166.6
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
26092.5
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
26063.4
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
26033.0
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
25897.6
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
25536.2
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
25238.9
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
25234.2
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
25078.3
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
24620.6
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
24533.0
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
24361.8
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
23402.1
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
22950.2
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
22669.2
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
22648.1
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
22502.4
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
22456.3
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
22407.4
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
22376.6
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
22153.9
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
21790.4
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
21715.4
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
21345.7
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
21295.5
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
21047.7
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
21030.6
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
20998.1
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
20985.1
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
20771.5
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
20692.8
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
20582.7
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
19685.2
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
19667.2
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
19407.8
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
19282.6
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
19084.9
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
18983.8
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
18873.1
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
18839.2
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
18801.4
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
18740.0
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
18443.7
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
18379.2
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
18328.7
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
18251.6
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
18201.1
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
18046.7
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
18030.7
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
18004.1
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
17958.0
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
17781.4
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
17746.6
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
17674.9
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
17560.6
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
17531.8
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
17444.9
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
17324.1
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
17248.7
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
17105.8
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
16944.8
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
16941.7
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
16645.5
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
16607.6
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
16516.6
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
16415.4
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
16372.9
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
16345.9
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
16345.7
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
16337.5
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
16261.5
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
16033.1
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
15885.9
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
15833.3
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
15776.7
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
15662.2
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
15553.8
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
15534.6
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
15532.7
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
15526.8
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
15511.9
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
15332.0
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
15312.6
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
15214.8
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
15159.0
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
15061.7
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
14987.1
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
14891.1
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
14836.7
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
14747.1
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
14741.5
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
14631.3
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
14618.9
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
14573.1
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
14493.9
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
14331.8
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
14307.4
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
14291.3
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
14287.2
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
14203.0
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
14196.1
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
14127.8
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
14041.1
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
13892.0
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
13797.3
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
13774.3
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
13519.7
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
13482.8
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
13472.6
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
13307.2
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
13212.6
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
13198.0
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
13135.4
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
13062.6
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
13041.3
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
13010.8
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
12898.6
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
12892.3
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
12837.3
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
12799.5
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
12755.0
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
12703.7
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
12624.3
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
12572.0
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
12558.4
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
12482.1
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
12444.5
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
12393.1
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
12317.1
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
12276.5
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
12260.1
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
12254.5
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
12165.3
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
12137.3
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
12063.2
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
11989.5
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
11972.0
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
11875.8
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
11820.1
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
11816.9
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
11705.2
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
11598.3
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
11561.4
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
11464.5
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
11460.3
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
11372.4
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
11366.2
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
11352.2
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
11351.1
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
11271.5
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
11265.2
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
11264.9
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
11222.0
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
11108.7
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
11060.6
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
10933.2
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
10838.7
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
10828.3
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
10826.6
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
10781.3
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
10753.6
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
10683.9
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
10580.5
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
10459.8
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
10447.8
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
10413.4
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
10408.9
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
10354.4
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
10313.5
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
10282.8
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
10266.7
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
10224.9
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
10155.1
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
10129.0
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
10080.0
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
9709.3
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
9634.1
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
9633.7
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
9630.9
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
9623.3
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
9613.9
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
9607.6
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
9602.0
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
9532.8
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
9488.6
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
9484.4
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
9420.5
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
9363.3
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
9322.3
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
9294.0
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
9236.8
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
9215.2
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
9204.7
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
9173.5
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
9067.7
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
9054.1
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
9014.5
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
8987.5
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
8923.5
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
8916.9
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
8836.5
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
8744.5
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
8703.5
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
8692.8
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
8682.2
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
8646.3
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
8589.8
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
8558.9
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
8549.3
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
8528.9
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
8523.3
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
8501.1
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
8486.7
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
8460.0
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
8438.8
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
8435.6
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
8402.3
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
8387.8
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
8305.7
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
8256.9
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
8235.5
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
8206.4
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
8160.8
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
8132.4
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
8126.5
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
8066.8
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
8017.7
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
7959.0
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
7956.7
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
7936.2
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
7868.3
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
7848.7
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
7841.5
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
7830.7
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
7772.3
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
7757.3
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
7742.6
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
7729.7
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
7684.6
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
7656.5
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
7586.2
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
7545.4
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
7497.3
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
7489.9
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
7483.8
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
7454.8
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
7446.8
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
7424.0
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
7418.4
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
7393.8
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
7369.1
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
7351.7
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
7342.6
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
7227.9
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
7227.2
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
7214.0
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
7054.1
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
7021.7
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
6941.8
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
6924.1
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
6910.9
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
6887.4
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
6751.5
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
6746.0
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
6648.3
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
6647.2
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
6627.5
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
6621.8
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
6559.1
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
6525.6
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
6453.7
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
6446.6
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
6238.1
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
6214.9
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
6137.4
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
6121.7
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
6080.7
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
6062.1
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
6027.5
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
5910.7
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
5875.3
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
5838.5
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
5753.8
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
5716.7
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
5671.2
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
5662.5
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
5608.3
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
5595.7
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
5514.8
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
5421.9
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
5364.3
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
5280.3
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
5276.6
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
5269.4
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
5232.1
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
5211.7
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
5209.2
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
5183.8
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
5108.8
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
4956.1
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
4947.9
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
4882.1
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
4828.3
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
4798.7
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
4700.2
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
4680.5
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
4619.3
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
4602.4
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
4598.8
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
4591.0
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
4571.1
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
4526.8
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
4525.8
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
4477.8
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
4430.6
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
4357.9
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
4323.4
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
4141.8
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
4021.3
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
3997.0
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
3969.0
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
3883.4
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
3798.5
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
3788.5
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
3784.7
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
3517.3
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
3490.6
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
3354.5
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
3150.7
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
2757.3
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
2740.6
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
2694.9
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
2379.1
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
1167.3
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.