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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
4815.2
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
29937.7
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
22173.5
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
17993.8
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
16563.7
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
15157.1
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
14110.5
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
13952.8
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
13811.0
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
13686.8
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
13659.0
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
13441.7
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
13206.7
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
12867.1
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
12851.5
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
12537.6
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
12024.0
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
11997.9
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
11940.2
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
11713.3
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
11476.1
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
10917.9
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
10910.8
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
10891.4
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
10728.2
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
10507.3
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
10309.8
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
10231.3
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
10217.0
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
10153.9
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
10127.5
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
10021.4
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
10020.2
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
9985.4
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
9914.7
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
9835.7
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
9735.9
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
9525.0
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
9520.0
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
9459.2
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
9430.9
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
9365.4
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
9356.6
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
9189.1
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
9108.3
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
9081.1
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
8998.0
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
8984.0
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
8944.6
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
8857.6
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
8670.4
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
8538.6
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
8474.9
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
8294.3
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
8101.3
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
7999.9
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
7973.2
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
7912.4
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
7728.5
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
7708.2
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
7698.6
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
7665.7
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
7610.4
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
7578.4
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
7405.8
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
7372.3
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
7355.4
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
7318.6
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
7250.2
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
7093.7
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
7068.5
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
7052.1
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
6995.4
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
6938.5
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
6927.2
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
6897.5
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
6880.0
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
6877.6
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
6785.7
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
6780.1
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
6758.0
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
6753.0
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
6722.3
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
6703.8
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
6668.9
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
6574.1
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
6568.9
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
6490.9
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
6447.2
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
6429.6
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
6347.5
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
6345.9
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
6303.1
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
6298.0
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
6294.3
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
6244.9
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
6113.2
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
6108.6
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
6050.8
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
6044.3
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
5990.2
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
5937.0
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
5925.6
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
5907.1
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
5885.7
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
5883.0
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
5779.7
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
5777.8
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
5762.2
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
5671.6
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
5649.3
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
5630.8
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
5600.6
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
5534.5
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
5475.4
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
5427.4
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
5391.1
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
5319.3
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
5254.2
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
5246.8
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
5232.4
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
5228.0
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
5173.2
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
5171.1
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
5163.3
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
5027.4
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
5017.3
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
4984.3
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
4977.4
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
4900.3
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
4826.4
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
4825.7
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
4824.6
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
4740.0
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
4705.6
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
4674.3
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
4658.3
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
4644.8
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
4638.6
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
4624.5
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
4603.8
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
4504.5
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
4471.2
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
4450.3
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
4430.1
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
4371.0
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
4351.5
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
4336.6
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
4332.9
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
4329.0
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
4303.5
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
4274.9
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
4273.1
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
4237.7
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
4214.0
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
4198.7
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
4196.0
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
4189.6
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
4172.0
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
4165.5
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
4162.7
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
4154.4
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
4109.6
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
4080.9
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
4074.9
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
4041.7
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
4010.3
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
3975.3
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
3963.7
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
3957.5
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
3910.3
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
3897.9
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
3795.2
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
3777.3
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
3775.3
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
3771.5
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
3763.4
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
3750.8
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
3686.7
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
3667.8
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
3629.1
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
3623.2
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
3611.0
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
3608.8
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
3591.3
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
3583.9
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
3582.5
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
3568.9
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
3547.9
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
3534.0
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
3521.2
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
3520.1
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
3492.8
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
3487.8
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
3476.3
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
3468.9
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
3459.9
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
3446.8
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
3427.9
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
3362.9
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
3356.7
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
3307.7
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
3228.0
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
3217.1
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
3159.2
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
3154.5
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
3135.5
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
3127.5
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
3111.2
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
3069.9
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
3044.3
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
3000.2
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
2998.6
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
2994.5
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
2975.7
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
2972.1
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
2969.5
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
2960.7
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
2954.2
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
2945.0
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
2933.4
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
2925.7
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
2912.2
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
2902.9
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
2894.7
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
2887.8
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
2840.1
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
2840.0
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
2797.8
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
2770.8
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
2751.7
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
2745.2
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
2743.9
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
2743.9
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
2740.2
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
2707.4
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
2673.8
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
2665.7
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
2657.0
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
2646.4
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
2627.3
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
2599.8
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
2594.1
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
2586.3
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
2574.3
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
2556.9
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2539.0
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
2538.7
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
2536.5
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
2500.1
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
2490.0
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
2487.4
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
2461.0
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
2454.1
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
2447.3
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
2421.8
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
2402.3
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
2390.8
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
2385.5
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
2385.0
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
2377.1
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
2374.2
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
2372.2
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
2321.2
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
2302.9
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
2293.4
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
2284.6
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
2271.0
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
2251.9
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
2230.4
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
2213.0
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
2194.0
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
2183.0
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
2181.6
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
2145.6
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
2144.7
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
2143.5
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
2118.9
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
2116.9
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
2092.9
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
2081.9
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
2071.7
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
2054.6
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
2052.1
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
2047.4
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
2024.0
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
2000.8
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
2000.1
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
1999.1
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
1993.2
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
1990.0
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
1989.9
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
1920.3
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
1917.7
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
1906.0
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
1905.3
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
1882.6
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
1874.2
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
1872.5
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
1867.1
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
1865.8
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
1826.0
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
1821.0
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
1816.1
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
1812.4
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
1801.2
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
1749.0
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
1720.7
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
1672.1
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
1647.6
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
1632.2
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
1626.5
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
1618.7
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
1603.0
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
1590.5
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
1564.0
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
1560.0
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
1533.1
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
1530.5
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
1513.9
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
1479.6
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
1473.5
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
1462.3
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
1444.6
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
1427.0
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
1379.8
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
1377.0
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
1375.0
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
1319.0
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
1317.4
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
1313.7
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
1310.9
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
1304.5
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
1297.7
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
1266.3
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
1232.9
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
1215.5
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
1207.6
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
1200.3
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
1192.1
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
1138.2
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
1125.8
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
1093.2
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
1092.0
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
1078.7
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
1073.7
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
1031.4
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
1012.0
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
968.7
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
895.1
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
849.0
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
798.7
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
743.7
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
657.5
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
415.9
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.