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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1006.3
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
3999.1
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
3286.0
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
3188.7
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
3144.7
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
2825.6
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
2776.4
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
2516.7
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
2498.2
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
2459.8
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
2417.6
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
2375.9
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
2321.6
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
2314.1
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
2302.3
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
2288.5
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
2172.3
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
2162.0
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
2121.2
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
2095.6
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
2091.1
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
2088.9
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1990.2
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
1980.1
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1962.9
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
1939.7
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
1938.8
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
1895.4
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
1879.6
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
1798.7
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
1794.3
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
1793.9
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
1792.5
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
1789.2
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1783.8
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
1783.3
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1781.4
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
1768.9
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
1752.3
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
1748.8
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
1747.8
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
1739.4
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
1736.6
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1726.2
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
1709.8
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
1695.3
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1695.3
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1660.9
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
1657.9
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
1654.8
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
1644.7
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
1634.9
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
1627.4
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
1615.9
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
1613.5
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
1607.1
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
1604.5
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
1583.3
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
1580.6
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
1579.6
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1578.4
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
1576.4
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
1570.5
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
1557.5
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
1555.8
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
1528.6
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
1518.6
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
1517.7
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
1513.3
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
1508.6
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1504.3
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
1489.4
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
1487.5
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
1484.4
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
1482.4
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
1475.1
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
1467.5
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
1462.7
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
1451.5
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
1432.3
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
1419.6
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
1407.5
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
1405.3
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
1401.9
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
1394.0
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1388.0
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
1368.7
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
1358.9
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
1356.9
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
1342.8
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1339.7
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
1335.3
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1333.7
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
1333.0
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
1330.5
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
1317.7
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
1316.7
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
1315.0
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
1309.8
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
1304.2
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
1297.1
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
1287.2
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
1285.8
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
1284.7
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
1276.6
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
1269.3
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
1267.0
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
1258.3
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
1257.4
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
1252.6
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
1246.8
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1232.4
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
1226.6
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
1221.7
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
1218.1
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
1217.8
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
1210.1
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
1207.9
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
1206.6
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
1202.3
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1201.8
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
1198.6
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
1192.3
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1185.1
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1180.8
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
1177.0
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1176.7
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
1167.6
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
1165.1
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
1160.4
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
1157.2
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
1155.0
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
1152.1
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
1130.7
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
1118.9
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
1112.3
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
1108.3
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
1105.1
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
1104.4
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
1102.6
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
1102.4
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
1101.9
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
1101.7
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
1100.0
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
1095.0
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
1087.0
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
1084.3
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
1083.1
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
1077.9
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
1074.0
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
1069.0
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
1061.3
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
1058.3
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1056.7
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
1054.9
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
1053.2
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
1053.1
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
1051.8
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
1046.8
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
1044.3
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
1043.7
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1043.6
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
1042.4
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
1041.9
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1035.3
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
1031.9
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1030.1
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
1029.6
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
1029.5
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
1024.9
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
1021.1
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
1019.6
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
1018.7
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
1018.7
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1018.1
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
1012.8
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
1005.5
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1005.3
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
1000.5
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
999.5
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
997.1
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
989.6
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
989.0
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
988.6
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
984.7
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
982.9
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
973.5
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
973.0
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
972.6
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
968.0
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
966.9
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
958.0
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
954.1
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
949.6
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
938.9
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
938.8
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
932.6
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
927.4
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
925.9
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
921.8
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
914.9
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
909.0
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
908.5
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
899.6
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
893.3
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
891.2
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
890.0
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
885.2
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
883.0
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
877.5
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
876.1
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
873.0
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
871.8
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
867.1
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
867.0
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
864.3
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
859.8
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
858.8
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
855.2
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
853.0
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
849.6
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
848.5
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
848.4
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
847.9
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
847.6
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
843.8
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
841.3
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
840.4
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
838.4
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
838.0
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
836.9
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
834.1
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
833.4
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
832.8
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
831.9
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
831.3
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
829.1
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
826.7
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
826.4
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
825.9
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
821.6
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
817.8
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
815.7
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
813.2
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
808.2
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
805.8
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
805.5
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
805.4
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
804.8
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
802.1
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
799.7
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
797.7
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
793.7
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
782.0
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
781.5
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
781.2
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
780.4
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
779.3
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
778.6
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
772.2
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
772.0
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
770.0
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
763.2
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
762.6
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
759.6
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
758.2
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
754.6
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
751.1
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
750.4
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
749.8
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
745.2
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
734.6
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
726.5
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
715.7
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
714.1
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
711.6
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
705.6
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
704.1
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
700.4
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
690.5
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
686.3
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
684.2
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
676.5
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
674.9
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
672.2
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
672.1
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
670.0
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
659.6
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
658.6
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
656.3
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
653.1
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
652.9
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
651.6
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
645.5
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
642.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
641.3
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
640.7
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
632.6
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
630.2
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
630.0
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
623.9
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
623.4
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
620.9
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
620.1
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
619.7
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
617.8
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
614.6
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
614.4
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
613.9
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
610.1
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
606.5
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
606.5
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
602.4
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
597.3
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
596.7
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
596.7
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
582.1
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
580.7
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
575.0
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
575.0
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
565.6
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
552.0
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
551.3
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
550.9
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
550.5
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
544.8
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
541.1
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
537.0
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
534.2
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
527.6
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
520.4
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
517.8
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
512.1
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
508.0
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
507.2
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
500.9
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
496.5
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
480.8
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
478.0
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
472.6
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
461.9
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
461.1
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
456.5
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
453.9
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
450.8
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
441.7
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
440.9
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
439.0
TCGA-HQ-A2OE-01A
male, alive, 1174 days
438.2
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
437.7
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
431.5
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
426.2
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
426.1
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
422.5
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
421.3
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
419.1
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
411.7
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
410.7
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
405.7
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
404.3
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
402.1
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
400.3
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
396.7
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
386.9
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
385.8
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
384.2
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
378.6
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
373.6
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
365.5
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
358.7
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
358.6
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
339.2
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
337.4
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
336.5
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
333.7
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
322.0
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
320.9
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
309.1
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
306.2
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
298.6
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
297.9
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
291.2
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
288.7
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
280.1
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
268.5
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
264.1
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
261.1
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
258.7
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
246.3
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
241.2
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
240.8
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
239.9
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
236.6
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
231.0
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
222.2
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
216.8
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
214.9
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
213.3
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
213.2
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
207.6
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
195.0
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
189.6
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
185.9
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
136.4
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
133.0
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
100.6
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
95.3
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.