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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
830.5
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
2846.6
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
2408.4
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
2365.7
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
2349.2
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
2208.7
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
2124.0
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
2109.2
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
2047.5
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1979.9
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
1917.6
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
1793.6
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
1773.6
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
1759.2
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1693.6
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1632.3
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1629.6
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
1629.6
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
1616.6
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1615.5
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
1603.7
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
1593.9
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
1577.4
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
1574.8
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
1559.5
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
1537.6
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
1536.8
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
1531.6
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
1516.8
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
1510.2
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1490.7
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
1480.1
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
1475.9
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1460.1
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1456.1
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1451.6
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
1428.8
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
1426.6
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
1400.0
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1385.6
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
1380.5
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
1376.7
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
1360.1
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
1359.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
1345.6
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
1327.6
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
1327.2
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
1327.1
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
1327.1
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
1321.1
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
1319.1
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1294.4
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
1291.4
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
1289.3
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
1288.6
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
1275.3
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1267.5
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1260.7
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
1253.8
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1251.7
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
1246.5
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1244.8
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
1240.8
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1233.2
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
1222.1
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
1219.8
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
1213.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
1210.0
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
1206.6
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
1206.5
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
1203.0
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1202.5
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1193.6
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
1191.5
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
1190.1
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
1181.4
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
1178.2
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
1171.6
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
1170.7
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
1168.3
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
1149.0
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1147.5
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1140.6
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1131.8
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
1113.1
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
1112.4
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1102.5
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
1097.3
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
1091.2
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
1086.6
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
1085.2
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
1083.3
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
1081.7
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
1080.5
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
1076.4
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
1072.5
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
1068.6
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
1068.4
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
1067.5
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1064.7
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1061.9
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
1051.6
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
1051.2
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
1034.9
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
1031.1
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1028.8
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
1018.3
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
1017.9
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1012.3
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
1003.4
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
999.5
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
995.0
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
994.9
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
989.3
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
984.0
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
981.1
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
968.7
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
967.7
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
963.3
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
962.3
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
960.4
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
959.0
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
958.7
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
954.3
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
943.4
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
939.5
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
939.0
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
938.6
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
933.1
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
931.8
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
929.8
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
920.2
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
919.9
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
899.2
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
890.1
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
888.6
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
885.6
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
884.6
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
881.5
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
880.9
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
877.7
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
876.8
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
873.6
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
872.1
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
871.3
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
870.6
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
857.4
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
854.4
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
853.8
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
853.8
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
852.0
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
850.6
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
849.5
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
849.4
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
845.7
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
845.4
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
844.5
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
839.8
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
838.2
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
831.8
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
831.5
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
828.4
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
828.3
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
826.2
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
825.9
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
823.1
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
821.6
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
819.5
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
818.9
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
817.6
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
815.1
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
813.8
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
809.3
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
801.4
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
800.7
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
800.6
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
797.4
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
795.3
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
784.8
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
782.6
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
774.2
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
772.8
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
771.3
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
769.8
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
769.6
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
767.3
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
762.4
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
761.4
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
760.9
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
760.2
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
759.8
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
758.6
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
756.0
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
754.6
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
753.5
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
750.9
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
750.4
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
749.1
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
748.0
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
747.5
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
747.1
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
746.6
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
742.6
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
740.5
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
739.7
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
736.7
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
734.8
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
734.4
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
732.7
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
730.0
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
729.3
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
725.4
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
725.4
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
723.0
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
719.7
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
718.3
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
717.8
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
715.4
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
714.8
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
713.2
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
709.0
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
708.8
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
705.5
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
705.0
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
699.5
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
693.4
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
687.9
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
687.3
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
683.8
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
681.0
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
677.5
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
674.0
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
670.4
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
668.7
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
668.3
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
667.4
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
664.2
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
658.9
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
655.0
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
652.9
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
651.1
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
648.2
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
647.9
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
646.7
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
646.3
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
646.1
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
641.0
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
638.6
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
638.6
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
635.2
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
632.8
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
631.6
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
628.8
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
627.4
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
624.9
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
624.7
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
622.7
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
620.8
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
619.0
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
616.6
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
615.9
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
612.0
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
611.0
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
608.7
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
606.7
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
606.3
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
605.0
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
604.2
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
604.0
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
603.6
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
600.5
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
595.3
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
593.3
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
592.8
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
591.5
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
589.9
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
586.2
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
583.1
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
580.7
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
577.3
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
576.7
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
575.9
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
575.3
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
573.1
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
572.9
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
568.8
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
568.3
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
567.6
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
565.2
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
562.1
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
560.4
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
559.8
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
559.7
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
557.2
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
557.1
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
555.9
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
547.0
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
546.0
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
545.0
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
543.7
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
537.4
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
537.1
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
536.3
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
536.1
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
535.4
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
533.9
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
531.3
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
531.1
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
528.1
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
525.1
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
522.9
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
522.3
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
521.8
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
521.0
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
519.8
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
519.0
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
518.9
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
518.4
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
516.3
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
515.8
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
512.7
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
508.9
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
498.5
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
498.2
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
497.8
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
496.6
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
495.5
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
491.4
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
486.9
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
482.7
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
482.0
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
482.0
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
480.5
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
479.9
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
479.8
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
478.6
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
475.9
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
474.9
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
474.5
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
474.0
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
472.9
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
472.4
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
471.0
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
469.7
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
466.2
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
463.6
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
459.9
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
457.2
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
455.5
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
455.4
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
451.7
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
450.4
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
448.8
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
448.3
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
444.0
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
443.1
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
438.8
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
437.9
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
434.1
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
429.2
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
420.5
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
418.8
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
416.5
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
415.8
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
413.1
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
408.4
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
404.8
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
404.2
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
404.2
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
403.7
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
400.1
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
399.9
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
396.9
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
396.3
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
396.2
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
394.7
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
391.6
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
391.5
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
389.6
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
389.2
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
386.5
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
381.4
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
380.8
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
375.0
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
373.2
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
372.2
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
369.3
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
368.9
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
368.0
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
367.8
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
366.3
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
361.8
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
358.1
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
353.2
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
350.6
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
347.9
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
343.0
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
333.7
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
331.5
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
311.3
TCGA-HQ-A2OE-01A
male, alive, 1174 days
302.2
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
295.8
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
256.7
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
230.2
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
209.5
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
190.5
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
146.0
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.