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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CYB is prognostic, high expression is favorable in liver cancer
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
6163.2
Number of samples
365
Samples
Sample
Description
FPKM
TCGA-WX-AA47-01A
33 years, female, white, stage:iiia, dead, 556 days
25149.7
TCGA-DD-A4NG-01A
77 years, male, white, stage:iiia, dead, 802 days
21078.7
TCGA-MR-A8JO-01A
34 years, male, white, stage:i, alive, 330 days
20139.5
TCGA-WJ-A86L-01A
68 years, female, white, stage:i, alive, 345 days
19568.9
TCGA-DD-AAD6-01A
66 years, male, asian, stage:iiia, alive, 672 days
19410.6
TCGA-DD-AAEB-01A
60 years, male, asian, stage:i, alive, 478 days
17314.3
TCGA-NI-A8LF-01A
74 years, male, white, stage:i, alive, 799 days
16388.8
TCGA-DD-A3A6-01A
72 years, female, white, stage:ii, dead, 3258 days
16338.1
TCGA-DD-A4NB-01A
25 years, male, white, stage:i, alive, 989 days
15644.9
TCGA-DD-AAE9-01A
69 years, male, asian, stage:i, alive, 722 days
15158.1
TCGA-ZP-A9D4-01A
64 years, female, white, alive, 395 days
14862.8
TCGA-5R-AA1D-01A
17 years, female, white, stage:iiia, alive, 449 days
14775.9
TCGA-DD-AACE-01A
62 years, male, asian, stage:i, alive, 2184 days
14187.4
TCGA-CC-A7IF-01A
59 years, male, asian, stage:iiia, dead, 649 days
14137.0
TCGA-DD-A3A2-01A
76 years, female, white, stage:i, dead, 2131 days
13477.4
TCGA-NI-A4U2-01A
71 years, male, white, stage:iiia, dead, 1791 days
12963.1
TCGA-EP-A3JL-01A
76 years, male, white, stage:i, alive, 303 days
12624.9
TCGA-DD-AADU-01A
60 years, male, asian, stage:ii, alive, 554 days
12601.5
TCGA-DD-A73A-01A
71 years, male, white, stage:i, alive, 728 days
12583.7
TCGA-DD-A4NI-01A
67 years, male, white, stage:ii, alive, 816 days
12517.2
TCGA-CC-A9FS-01A
55 years, male, asian, stage:ii, alive, 211 days
12488.3
TCGA-EP-A26S-01A
70 years, male, white, stage:i, alive, 608 days
12234.8
TCGA-BC-A10R-01A
66 years, female, white, dead, 308 days
12120.9
TCGA-BC-A10Z-01A
62 years, female, white, stage:i, dead, 34 days
11833.9
TCGA-G3-A3CH-01A
53 years, male, asian, stage:iiia, alive, 780 days
11823.6
TCGA-XR-A8TD-01A
49 years, female, white, stage:iiib, alive, 1030 days
11672.6
TCGA-G3-A7M8-01A
31 years, male, asian, stage:i, alive, 430 days
11612.6
TCGA-RC-A7SF-01A
66 years, male, asian, stage:i, alive, 579 days
11476.7
TCGA-DD-A3A4-01A
37 years, male, white, stage:iiia, dead, 612 days
11417.8
TCGA-RC-A7SH-01A
42 years, male, asian, stage:ii, alive, 468 days
11366.7
TCGA-RC-A6M5-01A
20 years, female, white, stage:iva, alive, 15 days
11300.8
TCGA-DD-A73D-01A
68 years, female, white, stage:ii, alive, 693 days
11272.4
TCGA-BD-A3ER-01A
62 years, male, white, stage:ii, alive, 1115 days
11268.8
TCGA-G3-AAV1-01A
51 years, male, asian, stage:iiic, dead, 359 days
11249.9
TCGA-EP-A2KC-01A
62 years, male, black or african american, stage:i, dead, 19 days
11120.0
TCGA-DD-AAEA-01A
65 years, male, asian, stage:i, alive, 575 days
11104.2
TCGA-LG-A9QC-01A
48 years, male, white, stage:i, alive, 425 days
11078.2
TCGA-RC-A7SB-01A
53 years, male, asian, stage:ii, alive, 588 days
11071.7
TCGA-WQ-A9G7-01A
female, white, alive, 30 days
10970.1
TCGA-2Y-A9H2-01A
64 years, female, white, stage:i, alive, 1731 days
10792.1
TCGA-DD-AACX-01A
66 years, male, asian, stage:ii, alive, 170 days
10590.6
TCGA-CC-A8HV-01A
51 years, female, asian, stage:ii, dead, 279 days
10466.9
TCGA-DD-AAW1-01A
55 years, male, asian, stage:iiia, alive, 1989 days
10436.5
TCGA-K7-A5RG-01A
66 years, male, black or african american, stage:i, alive, 519 days
10304.4
TCGA-DD-A3A8-01A
75 years, male, white, stage:ii, dead, 11 days
10254.1
TCGA-DD-AACT-01A
69 years, female, asian, stage:i, alive, 1562 days
10237.7
TCGA-BC-A10T-01A
76 years, male, white, dead, 837 days
10168.2
TCGA-XR-A8TF-01A
74 years, male, white, stage:i, dead, 693 days
10139.5
TCGA-DD-AAW3-01A
69 years, male, asian, stage:i, alive, 1633 days
10122.7
TCGA-BC-A10Q-01A
72 years, female, white, dead, 1135 days
9993.9
TCGA-G3-A7M7-01A
65 years, male, white, stage:i, alive, 361 days
9978.7
TCGA-FV-A3R3-01A
38 years, female, white, stage:i, dead, 366 days
9972.4
TCGA-WX-AA46-01A
62 years, male, white, stage:ii, alive, 756 days
9887.6
TCGA-CC-A7IL-01A
61 years, male, asian, stage:iiia, dead, 278 days
9766.1
TCGA-KR-A7K0-01A
65 years, male, white, stage:i, dead, 65 days
9653.7
TCGA-RC-A6M4-01A
74 years, female, white, stage:iiia, alive, 22 days
9611.8
TCGA-DD-A116-01A
68 years, male, asian, stage:iiia, dead, 1622 days
9410.3
TCGA-DD-A115-01A
53 years, male, white, stage:iiia, dead, 2542 days
9400.3
TCGA-DD-AAE6-01A
59 years, female, asian, stage:i, alive, 141 days
9373.1
TCGA-DD-A4NL-01A
46 years, male, white, stage:i, alive, 1711 days
9314.4
TCGA-CC-A8HT-01A
74 years, male, asian, stage:iiia, dead, 140 days
9294.6
TCGA-DD-AAED-01A
51 years, male, asian, stage:i, alive, 763 days
9127.9
TCGA-DD-AADR-01A
58 years, male, asian, stage:i, alive, 2028 days
9111.1
TCGA-DD-AADL-01A
58 years, male, asian, stage:i, alive, 636 days
9094.1
TCGA-DD-AADG-01A
70 years, male, asian, stage:iiia, alive, 1145 days
9089.4
TCGA-CC-A7IE-01A
57 years, male, asian, stage:iiia, dead, 217 days
8994.1
TCGA-KR-A7K8-01A
57 years, male, stage:i, alive, 906 days
8900.4
TCGA-G3-A3CI-01A
71 years, male, white, stage:i, alive, 180 days
8857.6
TCGA-DD-AAE3-01A
50 years, male, asian, stage:i, alive, 566 days
8856.8
TCGA-LG-A9QD-01A
68 years, male, white, stage:iiia, alive, 366 days
8763.9
TCGA-CC-A7IH-01A
58 years, male, asian, stage:iiia, alive, 365 days
8756.9
TCGA-DD-A4NF-01A
72 years, male, white, stage:i, alive, 942 days
8695.4
TCGA-G3-A25Z-01A
58 years, male, asian, stage:i, alive, 655 days
8683.3
TCGA-CC-A3MA-01A
61 years, male, asian, stage:iiia, dead, 303 days
8579.6
TCGA-DD-A4NS-01A
62 years, female, white, stage:i, dead, 2456 days
8574.9
TCGA-DD-A1EK-01A
64 years, female, white, stage:ivb, dead, 558 days
8526.4
TCGA-BC-A216-01A
62 years, female, white, stage:iiia, alive, 1351 days
8523.7
TCGA-G3-A6UC-01A
65 years, male, white, stage:iiib, alive, 671 days
8497.7
TCGA-CC-A5UC-01A
63 years, male, asian, stage:iiia, dead, 347 days
8437.7
TCGA-ED-A82E-01A
60 years, female, asian, stage:iiia, alive, 408 days
8411.9
TCGA-DD-AACA-01A
65 years, male, asian, stage:i, alive, 2301 days
8383.2
TCGA-DD-A1EE-01A
73 years, male, white, stage:iiia, dead, 349 days
8377.9
TCGA-2Y-A9GW-01A
64 years, male, white, stage:i, dead, 1271 days
8362.6
TCGA-WQ-AB4B-01A
62 years, male, white, stage:ii, alive, 395 days
8284.6
TCGA-K7-AAU7-01A
61 years, male, white, stage:ii, alive, 359 days
8182.6
TCGA-CC-A5UD-01A
45 years, male, asian, stage:iiia, dead, 304 days
8156.8
TCGA-MR-A520-01A
58 years, male, white, stage:i, alive, 229 days
8105.8
TCGA-HP-A5MZ-01A
62 years, male, stage:i, dead, 91 days
8082.0
TCGA-MI-A75C-01A
64 years, male, white, stage:i, alive, 291 days
8044.4
TCGA-2Y-A9H6-01A
68 years, female, white, stage:i, alive, 357 days
8001.2
TCGA-DD-AAE1-01A
52 years, male, asian, stage:i, alive, 552 days
7957.1
TCGA-MI-A75H-01A
77 years, male, white, alive, 747 days
7950.1
TCGA-BC-A3KF-01A
66 years, female, white, stage:i, alive, 8 days
7890.9
TCGA-BC-A10X-01A
52 years, female, white, stage:iiia, dead, 770 days
7888.7
TCGA-PD-A5DF-01A
58 years, female, white, stage:iiib, dead, 639 days
7888.2
TCGA-G3-A5SM-01A
58 years, male, white, stage:ii, alive, 520 days
7865.2
TCGA-DD-AAEH-01A
73 years, male, asian, stage:i, alive, 784 days
7831.4
TCGA-DD-A1EA-01A
68 years, male, asian, stage:ii, alive, 2415 days
7758.6
TCGA-ZS-A9CG-01A
55 years, male, white, stage:ii, alive, 341 days
7719.8
TCGA-DD-AAD8-01A
73 years, female, asian, stage:i, alive, 1219 days
7717.7
TCGA-2Y-A9H8-01A
85 years, female, white, dead, 633 days
7685.2
TCGA-G3-A5SJ-01A
59 years, male, white, stage:i, alive, 698 days
7660.8
TCGA-DD-AADD-01A
51 years, male, asian, stage:i, alive, 1231 days
7650.8
TCGA-ED-A4XI-01A
58 years, male, asian, stage:ii, alive, 819 days
7621.4
TCGA-UB-AA0V-01A
69 years, female, white, stage:i, alive, 314 days
7612.5
TCGA-DD-A4NJ-01A
54 years, female, white, stage:ii, alive, 928 days
7605.5
TCGA-DD-AAW2-01A
69 years, male, asian, stage:i, alive, 1855 days
7581.4
TCGA-DD-A4ND-01A
56 years, female, white, stage:i, alive, 2746 days
7451.6
TCGA-DD-AACJ-01A
75 years, male, asian, stage:ii, alive, 2102 days
7446.3
TCGA-BD-A2L6-01A
69 years, male, white, alive, 1363 days
7357.0
TCGA-DD-A118-01A
77 years, female, white, stage:ii, alive, 3437 days
7342.2
TCGA-G3-A5SL-01A
70 years, male, white, stage:ii, alive, 621 days
7317.6
TCGA-DD-AAEI-01A
72 years, male, asian, stage:i, alive, 1531 days
7264.0
TCGA-DD-AADA-01A
66 years, female, asian, stage:i, alive, 1233 days
7235.1
TCGA-DD-A1ED-01A
68 years, male, white, stage:i, alive, 2301 days
7217.4
TCGA-ED-A7PX-01A
48 years, female, asian, stage:ii, alive, 6 days
7175.5
TCGA-G3-AAV2-01A
50 years, male, white, stage:i, alive, 372 days
7173.8
TCGA-DD-A73B-01A
72 years, female, white, stage:i, dead, 283 days
7158.8
TCGA-2Y-A9GV-01A
54 years, female, white, stage:i, dead, 2532 days
7126.8
TCGA-BC-A3KG-01A
68 years, female, white, stage:ii, alive, 680 days
7107.2
TCGA-BC-A110-01A
51 years, female, black or african american, dead, 2116 days
7044.4
TCGA-DD-AACQ-01A
50 years, male, asian, stage:ii, dead, 432 days
7038.5
TCGA-XR-A8TC-01A
43 years, female, white, stage:i, alive, 1339 days
7027.4
TCGA-DD-AAD2-01A
66 years, male, asian, stage:i, alive, 658 days
6987.7
TCGA-G3-A5SK-01A
58 years, male, white, stage:i, alive, 744 days
6982.4
TCGA-KR-A7K2-01A
64 years, male, white, stage:i, alive, 829 days
6964.1
TCGA-RG-A7D4-01A
69 years, male, black or african american, stage:ii, alive, 1098 days
6912.2
TCGA-DD-A113-01A
55 years, female, white, stage:ii, alive, 2425 days
6880.3
TCGA-G3-A3CJ-01A
52 years, male, american indian or alaska native, stage:ii, alive, 594 days
6863.3
TCGA-2Y-A9GX-01A
68 years, male, white, stage:i, alive, 2442 days
6836.1
TCGA-DD-AAVP-01A
48 years, male, asian, stage:i, alive, 2752 days
6800.5
TCGA-DD-AAVX-01A
38 years, male, asian, stage:ii, alive, 1570 days
6775.0
TCGA-DD-AAVR-01A
44 years, male, asian, stage:i, alive, 2513 days
6701.7
TCGA-DD-AACD-01A
48 years, male, asian, stage:i, dead, 381 days
6679.8
TCGA-DD-AAD0-01A
73 years, female, asian, stage:i, alive, 137 days
6539.4
TCGA-2Y-A9GZ-01A
82 years, female, white, stage:ii, dead, 848 days
6517.2
TCGA-FV-A23B-01A
70 years, female, white, stage:ii, dead, 1852 days
6456.7
TCGA-5R-AAAM-01A
65 years, female, white, stage:ii, dead, 46 days
6453.6
TCGA-DD-A4NE-01A
75 years, female, white, stage:iiia, dead, 660 days
6404.8
TCGA-ED-A7PY-01A
20 years, female, asian, stage:ii, alive, 390 days
6357.8
TCGA-DD-A11B-01A
73 years, male, white, stage:i, dead, 14 days
6353.3
TCGA-DD-AACZ-01A
63 years, female, asian, stage:i, dead, 171 days
6341.1
TCGA-DD-AAEE-01A
55 years, male, asian, stage:i, alive, 810 days
6312.4
TCGA-DD-A1EC-01A
20 years, female, white, stage:i, alive, 602 days
6302.4
TCGA-UB-AA0U-01A
60 years, male, white, stage:ii, alive, 327 days
6298.3
TCGA-BD-A3EP-01A
76 years, female, black or african american, stage:i, alive, 409 days
6237.4
TCGA-DD-A1EB-01A
72 years, female, stage:i, alive, 2017 days
6234.5
TCGA-DD-A39W-01A
29 years, female, white, stage:iii, dead, 827 days
6192.5
TCGA-DD-A4NK-01A
80 years, female, white, stage:iiia, dead, 1210 days
6170.4
TCGA-ZP-A9D0-01A
67 years, female, black or african american, alive, 1091 days
6155.1
TCGA-RC-A7SK-01A
59 years, male, asian, stage:i, alive, 472 days
6147.5
TCGA-DD-AADF-01A
64 years, female, asian, stage:i, dead, 115 days
6136.7
TCGA-BC-A112-01A
80 years, male, white, dead, 153 days
6117.9
TCGA-WX-AA44-01A
64 years, female, white, stage:i, alive, 615 days
6117.0
TCGA-DD-AAE2-01A
51 years, male, asian, stage:i, alive, 638 days
6105.0
TCGA-CC-A3MB-01A
36 years, male, asian, stage:iiia, dead, 315 days
6098.0
TCGA-DD-AAEK-01A
51 years, male, asian, stage:ii, alive, 1067 days
6082.3
TCGA-RC-A7S9-01A
47 years, female, asian, stage:i, alive, 640 days
6070.7
TCGA-DD-A4NH-01A
65 years, female, white, stage:iiib, alive, 917 days
6028.7
TCGA-ED-A7XP-01A
53 years, female, asian, stage:ii, alive, 400 days
6028.1
TCGA-BC-A10Y-01A
76 years, male, white, dead, 711 days
5979.9
TCGA-ZS-A9CF-01A
64 years, male, white, stage:ii, alive, 2412 days
5961.2
TCGA-DD-A11A-01A
67 years, male, black or african american, stage:i, alive, 79 days
5926.7
TCGA-MI-A75E-01A
61 years, male, white, stage:iiic, alive, 507 days
5926.3
TCGA-DD-AAC9-01A
51 years, male, asian, stage:i, alive, 347 days
5904.1
TCGA-EP-A2KB-01A
46 years, female, white, stage:i, dead, 596 days
5892.4
TCGA-DD-AAD5-01A
54 years, male, asian, stage:i, alive, 1345 days
5839.6
TCGA-DD-AADK-01A
68 years, female, asian, stage:ii, alive, 1049 days
5809.4
TCGA-DD-AACV-01A
53 years, male, asian, stage:i, alive, 1531 days
5804.2
TCGA-DD-AAVW-01A
35 years, male, asian, stage:i, alive, 2317 days
5790.1
TCGA-DD-AAVS-01A
56 years, male, asian, stage:i, alive, 1823 days
5774.6
TCGA-2Y-A9H0-01A
49 years, male, white, stage:iiia, alive, 3675 days
5763.0
TCGA-DD-A3A3-01A
45 years, male, asian, stage:i, dead, 535 days
5711.6
TCGA-GJ-A3OU-01A
59 years, male, white, stage:i, alive, 879 days
5678.4
TCGA-ED-A97K-01A
54 years, male, asian, stage:iiia, alive, 6 days
5675.8
TCGA-DD-AACW-01A
43 years, male, asian, stage:i, alive, 1424 days
5637.1
TCGA-G3-A25U-01A
63 years, female, asian, stage:i, alive, 1636 days
5634.2
TCGA-ZP-A9D1-01A
56 years, female, white, alive, 21 days
5599.0
TCGA-DD-AACF-01A
68 years, male, asian, stage:i, dead, 365 days
5557.6
TCGA-DD-A4NV-01A
61 years, male, white, stage:iiia, alive, 2398 days
5536.1
TCGA-DD-AAEG-01A
59 years, female, asian, stage:i, alive, 719 days
5525.7
TCGA-2Y-A9H9-01A
70 years, male, white, stage:i, alive, 697 days
5524.3
TCGA-QA-A7B7-01A
48 years, male, black or african american, stage:ii, alive, 94 days
5507.2
TCGA-BC-A10S-01A
81 years, male, white, dead, 1423 days
5445.8
TCGA-G3-A5SI-01A
44 years, male, asian, stage:ii, dead, 768 days
5361.2
TCGA-BC-A10U-01A
69 years, male, white, dead, 837 days
5334.8
TCGA-4R-AA8I-01A
66 years, male, white, stage:ii, dead, 262 days
5333.3
TCGA-2Y-A9H4-01A
68 years, male, black or african american, stage:i, alive, 1452 days
5301.9
TCGA-5R-AA1C-01A
57 years, male, white, stage:ii, alive, 520 days
5246.5
TCGA-2Y-A9GU-01A
55 years, female, white, stage:i, alive, 1939 days
5222.5
TCGA-ZP-A9CY-01A
66 years, female, white, alive, 782 days
5221.7
TCGA-G3-AAV3-01A
58 years, female, white, stage:ii, alive, 412 days
5176.0
TCGA-DD-A11C-01A
69 years, male, white, stage:i, alive, 662 days
5151.9
TCGA-DD-A4NO-01A
66 years, male, white, stage:i, alive, 2245 days
5151.7
TCGA-G3-AAV4-01A
83 years, female, white, stage:i, dead, 27 days
5106.2
TCGA-G3-AAV5-01A
67 years, male, white, stage:ii, alive, 354 days
5086.1
TCGA-ED-A8O6-01A
50 years, female, asian, stage:iiia, dead, 56 days
5060.4
TCGA-DD-AADC-01A
53 years, male, asian, stage:i, dead, 425 days
5035.4
TCGA-O8-A75V-01A
54 years, male, stage:i, alive, 538 days
5030.4
TCGA-5C-AAPD-01A
61 years, male, asian, stage:ii, alive, 20 days
5019.6
TCGA-EP-A12J-01A
63 years, male, black or african american, stage:i, alive, 570 days
4990.6
TCGA-BC-A69I-01A
69 years, male, white, stage:i, alive, 387 days
4976.4
TCGA-DD-A1EL-01A
23 years, male, black or african american, stage:ii, dead, 415 days
4965.3
TCGA-BW-A5NO-01A
50 years, male, black or african american, stage:iiia, alive, 20 days
4890.0
TCGA-UB-A7MD-01A
67 years, male, black or african american, stage:i, dead, 52 days
4885.3
TCGA-DD-A4NR-01A
85 years, female, white, stage:i, dead, 9 days
4884.9
TCGA-DD-A3A5-01A
66 years, female, white, stage:iii, dead, 3125 days
4876.6
TCGA-DD-A1EF-01A
57 years, female, white, stage:i, dead, 394 days
4870.1
TCGA-CC-A7IK-01A
59 years, male, asian, stage:iiia, dead, 262 days
4869.0
TCGA-DD-A4NP-01A
32 years, male, white, stage:i, alive, 3308 days
4863.9
TCGA-ZS-A9CD-01A
73 years, male, white, stage:ii, dead, 1386 days
4863.8
TCGA-DD-A73F-01A
77 years, female, white, stage:i, alive, 1085 days
4853.2
TCGA-CC-A8HU-01A
39 years, female, asian, stage:iiia, dead, 344 days
4846.0
TCGA-DD-AACY-01A
61 years, male, asian, stage:i, alive, 1450 days
4825.5
TCGA-2Y-A9H3-01A
45 years, male, white, stage:ii, alive, 1516 days
4803.0
TCGA-2Y-A9HA-01A
70 years, male, white, stage:ii, dead, 36 days
4768.8
TCGA-DD-AADS-01A
63 years, male, asian, stage:i, alive, 474 days
4748.2
TCGA-CC-5259-01A
60 years, female, asian, stage:iiic, alive, 250 days
4744.8
TCGA-CC-A3MC-01A
54 years, male, asian, stage:iiia, alive, 363 days
4735.9
TCGA-DD-AADQ-01A
59 years, male, asian, stage:ii, alive, 436 days
4702.1
TCGA-2Y-A9H7-01A
81 years, female, white, stage:i, alive, 1168 days
4691.5
TCGA-ED-A7XO-01A
29 years, male, asian, stage:iiia, alive, 427 days
4638.5
TCGA-UB-A7MC-01A
59 years, male, white, stage:iiia, alive, 500 days
4629.8
TCGA-ED-A627-01A
74 years, male, white, stage:i, alive, 423 days
4610.5
TCGA-MI-A75G-01A
63 years, male, white, stage:ii, alive, 698 days
4606.8
TCGA-XR-A8TE-01A
16 years, male, white, stage:iiia, alive, 925 days
4565.5
TCGA-CC-A8HS-01A
18 years, male, asian, stage:iiic, dead, 300 days
4552.1
TCGA-2Y-A9GT-01A
51 years, male, white, stage:i, dead, 1624 days
4511.1
TCGA-DD-AADB-01A
51 years, male, asian, stage:i, alive, 1242 days
4444.6
TCGA-DD-A73E-01A
66 years, male, white, stage:i, alive, 44 days
4402.7
TCGA-FV-A496-01A
84 years, female, white, stage:i, alive, 10 days
4397.8
TCGA-DD-A39Z-01A
43 years, female, stage:ii, dead, 601 days
4368.2
TCGA-DD-AADW-01A
48 years, male, asian, stage:i, alive, 587 days
4368.2
TCGA-ED-A7PZ-01A
61 years, male, asian, stage:ii, alive, 6 days
4365.3
TCGA-K7-A5RF-01A
64 years, male, white, stage:i, alive, 631 days
4356.9
TCGA-DD-A4NQ-01A
60 years, male, white, stage:ii, dead, 373 days
4277.5
TCGA-DD-AAVY-01A
56 years, male, asian, stage:iiia, alive, 1970 days
4277.3
TCGA-DD-AAD1-01A
51 years, female, asian, stage:i, alive, 564 days
4250.9
TCGA-G3-A25V-01A
68 years, male, white, stage:i, alive, 860 days
4242.3
TCGA-G3-A3CK-01A
61 years, male, asian, stage:i, alive, 585 days
4224.2
TCGA-ZS-A9CE-01A
79 years, female, white, stage:ii, alive, 1241 days
4187.4
TCGA-DD-AACS-01A
39 years, male, asian, stage:i, alive, 1804 days
4154.9
TCGA-DD-A1EH-01A
23 years, male, white, stage:iii, alive, 1495 days
4103.3
TCGA-DD-AADY-01A
55 years, female, asian, stage:i, alive, 555 days
3990.1
TCGA-XR-A8TG-01A
59 years, male, white, stage:i, alive, 898 days
3980.8
TCGA-DD-A3A7-01A
67 years, male, stage:iiib, dead, 419 days
3979.6
TCGA-DD-AACL-01A
66 years, female, asian, stage:i, dead, 107 days
3978.3
TCGA-EP-A2KA-01A
52 years, female, white, stage:iiia, dead, 627 days
3966.2
TCGA-DD-A1EI-01A
46 years, male, asian, stage:i, alive, 183 days
3944.6
TCGA-2Y-A9GS-01A
58 years, male, white, dead, 724 days
3924.5
TCGA-G3-AAUZ-01A
48 years, male, stage:i, alive, 480 days
3849.7
TCGA-DD-AADJ-01A
70 years, female, asian, stage:i, alive, 1066 days
3847.0
TCGA-DD-AADV-01A
50 years, male, asian, stage:i, alive, 574 days
3833.2
TCGA-5C-A9VH-01A
70 years, male, white, stage:i, alive, 322 days
3817.6
TCGA-5C-A9VG-01A
58 years, male, white, stage:ii, alive, 328 days
3776.3
TCGA-ED-A66X-01A
35 years, male, asian, stage:iiia, alive, 406 days
3760.5
TCGA-3K-AAZ8-01A
65 years, male, black or african american, stage:iiib, alive, 396 days
3753.9
TCGA-DD-A1EJ-01A
71 years, female, white, stage:iiic, dead, 1005 days
3729.8
TCGA-DD-A119-01A
40 years, male, asian, stage:iv, dead, 223 days
3729.4
TCGA-DD-A114-01A
42 years, male, black or african american, stage:ii, dead, 1149 days
3728.8
TCGA-BC-A8YO-01A
66 years, female, white, stage:iiic, alive, 562 days
3715.5
TCGA-BC-A5W4-01A
69 years, male, white, stage:iiia, dead, 547 days
3712.1
TCGA-DD-A3A1-01A
65 years, male, stage:iiia, dead, 233 days
3710.6
TCGA-EP-A3RK-01A
73 years, male, white, stage:iiia, alive, 363 days
3698.1
TCGA-DD-AAVV-01A
56 years, male, asian, stage:ii, alive, 2455 days
3684.2
TCGA-DD-AACP-01A
65 years, male, asian, stage:i, alive, 415 days
3683.5
TCGA-FV-A2QR-01A
male, white, stage:i, dead, 581 days
3679.4
TCGA-2Y-A9HB-01A
66 years, male, stage:i, alive, 260 days
3659.1
TCGA-KR-A7K7-01A
61 years, female, white, stage:ii, alive, 951 days
3635.2
TCGA-DD-AAE0-01A
45 years, female, asian, stage:iiia, alive, 555 days
3632.4
TCGA-DD-A1EG-01A
77 years, male, white, stage:i, dead, 1372 days
3603.8
TCGA-DD-AAE4-01A
49 years, female, asian, stage:i, alive, 608 days
3602.9
TCGA-ED-A66Y-01A
51 years, female, asian, stage:iiia, dead, 296 days
3597.2
TCGA-DD-AAE7-01A
72 years, male, asian, stage:i, alive, 644 days
3544.3
TCGA-2Y-A9H5-01A
59 years, female, white, stage:i, dead, 555 days
3542.5
TCGA-MI-A75I-01A
61 years, male, black or african american, alive, 630 days
3459.1
TCGA-ED-A459-01A
47 years, male, asian, stage:ii, alive, 910 days
3459.0
TCGA-DD-AAVQ-01A
38 years, male, asian, stage:i, alive, 2728 days
3451.9
TCGA-DD-AAVZ-01A
38 years, male, asian, stage:i, alive, 1900 days
3411.2
TCGA-2Y-A9H1-01A
58 years, male, white, stage:i, dead, 1229 days
3405.6
TCGA-CC-A7IJ-01A
56 years, male, asian, stage:ii, alive, 382 days
3404.3
TCGA-GJ-A6C0-01A
75 years, female, white, stage:ii, dead, 31 days
3395.0
TCGA-DD-AAW0-01A
54 years, male, asian, stage:i, alive, 2015 days
3387.5
TCGA-FV-A3R2-01A
75 years, male, white, stage:i, dead, 194 days
3318.6
TCGA-DD-A4NA-01A
67 years, female, white, stage:iiic, alive, 1008 days
3308.5
TCGA-HP-A5N0-01A
88 years, female, dead, 1147 days
3281.7
TCGA-ED-A8O5-01A
59 years, female, asian, stage:iiia, alive, 406 days
3257.1
TCGA-CC-A9FW-01A
68 years, male, asian, stage:iiia, alive, 248 days
3175.9
TCGA-G3-A25S-01A
64 years, male, white, stage:i, dead, 416 days
3171.2
TCGA-DD-AACN-01A
32 years, male, asian, stage:i, alive, 1302 days
3170.8
TCGA-ZP-A9CV-01A
59 years, male, white, dead, 1088 days
3169.8
TCGA-DD-AACC-01A
61 years, male, asian, stage:i, dead, 1685 days
3158.2
TCGA-BC-4072-01B
74 years, female, white, stage:iiia, dead, 1490 days
3158.0
TCGA-DD-AADP-01A
45 years, male, asian, stage:i, alive, 458 days
3155.7
TCGA-DD-AACO-01A
40 years, male, asian, stage:i, alive, 1876 days
3138.3
TCGA-DD-AACH-01A
69 years, male, asian, stage:ii, dead, 195 days
3110.1
TCGA-G3-A3CG-01A
80 years, male, white, stage:i, alive, 673 days
3071.9
TCGA-CC-5262-01A
67 years, male, asian, stage:iiic, dead, 103 days
3036.9
TCGA-DD-AACI-01A
69 years, male, asian, stage:ii, alive, 1618 days
3031.1
TCGA-UB-A7ME-01A
51 years, male, asian, stage:i, alive, 486 days
3022.4
TCGA-UB-A7MF-01A
57 years, male, white, stage:iiia, dead, 214 days
2979.7
TCGA-G3-A25T-01A
45 years, female, white, stage:iiia, alive, 1553 days
2963.2
TCGA-DD-AACB-01A
74 years, female, asian, stage:i, alive, 2324 days
2891.6
TCGA-DD-AA3A-01A
81 years, female, white, stage:i, dead, 410 days
2884.1
TCGA-G3-A7M6-01A
60 years, female, white, stage:i, alive, 632 days
2858.2
TCGA-DD-A4NN-01A
56 years, female, white, stage:i, dead, 899 days
2847.4
TCGA-DD-AACK-01A
70 years, male, asian, stage:i, alive, 9 days
2815.1
TCGA-G3-A7M5-01A
76 years, male, asian, stage:i, alive, 447 days
2811.6
TCGA-DD-AACU-01A
59 years, male, asian, stage:i, alive, 1567 days
2797.9
TCGA-G3-AAV0-01A
58 years, male, asian, stage:i, alive, 476 days
2730.2
TCGA-DD-A11D-01A
57 years, female, white, stage:i, dead, 1560 days
2714.4
TCGA-ZP-A9CZ-01A
72 years, male, asian, alive, 706 days
2713.8
TCGA-CC-A5UE-01A
48 years, male, asian, stage:iiib, dead, 272 days
2668.6
TCGA-DD-AAC8-01A
72 years, male, asian, stage:i, dead, 16 days
2653.0
TCGA-G3-A7M9-01A
70 years, male, white, stage:iiib, dead, 56 days
2643.8
TCGA-FV-A4ZQ-01A
52 years, male, white, stage:i, alive, 12 days
2630.5
TCGA-FV-A3I0-01A
76 years, female, white, stage:ii, alive, 848 days
2605.4
TCGA-LG-A6GG-01A
79 years, female, white, stage:ii, alive, 387 days
2598.7
TCGA-BC-A217-01A
75 years, female, white, stage:ii, dead, 1397 days
2587.7
TCGA-YA-A8S7-01A
69 years, male, white, stage:iiia, dead, 412 days
2539.4
TCGA-GJ-A9DB-01A
68 years, male, white, stage:i, dead, 67 days
2527.4
TCGA-CC-A7IG-01A
47 years, male, asian, stage:ii, dead, 299 days
2482.8
TCGA-DD-A3A9-01A
64 years, female, white, stage:ivb, dead, 931 days
2453.6
TCGA-K7-A6G5-01A
66 years, male, white, stage:i, alive, 512 days
2366.9
TCGA-DD-AADM-01A
58 years, male, asian, stage:ii, dead, 12 days
2341.4
TCGA-DD-A73G-01A
73 years, female, white, stage:i, alive, 3478 days
2306.7
TCGA-ES-A2HS-01A
80 years, male, white, stage:i, dead, 688 days
2286.3
TCGA-DD-A73C-01A
65 years, female, white, stage:iiia, alive, 701 days
2278.1
TCGA-DD-AADI-01A
43 years, female, asian, stage:i, alive, 1085 days
2263.5
TCGA-G3-AAV7-01A
38 years, male, asian, stage:ii, alive, 361 days
2257.3
TCGA-DD-AACG-01A
52 years, male, asian, stage:ii, dead, 469 days
2256.2
TCGA-2Y-A9GY-01A
64 years, female, white, stage:ii, dead, 757 days
2249.1
TCGA-T1-A6J8-01A
68 years, male, white, alive, 23 days
2230.8
TCGA-UB-A7MA-01A
62 years, female, white, stage:ii, alive, 848 days
2213.1
TCGA-BC-A10W-01A
50 years, male, asian, dead, 91 days
2204.3
TCGA-DD-AAVU-01A
46 years, male, asian, stage:ii, alive, 2202 days
2192.8
TCGA-CC-5263-01A
35 years, male, asian, stage:iiia, dead, 129 days
2186.7
TCGA-RC-A6M6-01A
75 years, male, white, stage:ii, alive, 9 days
2185.8
TCGA-G3-A25Y-01A
52 years, female, asian, stage:i, dead, 452 days
2106.4
TCGA-CC-A1HT-01A
50 years, male, asian, stage:iiia, dead, 101 days
2098.3
TCGA-FV-A495-01A
51 years, female, white, stage:ii, alive, 1 days
2086.7
TCGA-CC-5264-01A
71 years, male, asian, stage:iiia, dead, 102 days
2056.9
TCGA-FV-A2QQ-01A
80 years, male, white, stage:i, alive, 729 days
2038.0
TCGA-UB-A7MB-01A
24 years, male, white, stage:ii, alive, 601 days
1959.8
TCGA-FV-A3I1-01A
female, white, stage:ii, dead, 247 days
1928.3
TCGA-DD-AAD3-01A
43 years, male, asian, stage:i, alive, 1295 days
1871.1
TCGA-ES-A2HT-01A
54 years, male, black or african american, stage:i, dead, 438 days
1809.2
TCGA-CC-A7II-01A
55 years, male, asian, stage:iiia, alive, 399 days
1744.2
TCGA-ZP-A9D2-01A
51 years, male, white, dead, 765 days
1728.4
TCGA-DD-A39X-01A
78 years, female, white, stage:i, dead, 1694 days
1639.3
TCGA-DD-A39V-01A
77 years, male, white, stage:ii, dead, 643 days
1620.0
TCGA-CC-A3M9-01A
45 years, male, asian, stage:iiia, dead, 300 days
1546.0
TCGA-FV-A4ZP-01A
78 years, male, white, stage:iiia, dead, 2486 days
1539.1
TCGA-CC-A123-01A
24 years, female, asian, stage:iiia, alive, 219 days
1503.9
TCGA-DD-AADN-01A
59 years, male, asian, stage:i, alive, 898 days
1476.3
TCGA-CC-5260-01A
61 years, female, asian, stage:iiic, dead, 87 days
1435.6
TCGA-G3-AAV6-01A
53 years, female, white, stage:iiia, dead, 65 days
1320.9
TCGA-CC-5261-01A
44 years, male, asian, stage:ii, dead, 97 days
1315.3
TCGA-CC-5258-01A
48 years, male, asian, stage:ii, dead, 129 days
1209.5
TCGA-BC-4073-01B
73 years, male, white, stage:iiia, alive, 849 days
1078.8
TCGA-DD-A39Y-01A
67 years, male, asian, stage:i, dead, 171 days
1038.7
TCGA-G3-A25X-01A
73 years, male, asian, stage:ii, alive, 1779 days
959.5
TCGA-DD-AADO-01A
55 years, male, asian, stage:i, alive, 453 days
921.2
TCGA-ED-A5KG-01A
60 years, female, asian, stage:ii, alive, 854 days
885.7
TCGA-BC-A69H-01A
64 years, male, white, stage:ii, alive, 444 days
550.1
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.