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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
8632.9
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
32015.2
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
27989.8
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
24016.6
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
23603.0
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
23485.7
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
23119.2
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
21907.3
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
21010.3
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
20255.8
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
19907.1
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
19899.8
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
19288.0
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
19279.0
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
19017.0
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
18832.5
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
18714.9
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
18465.2
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
18327.7
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
18257.1
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
17606.7
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
17528.7
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
17454.3
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
16935.8
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
16892.7
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
16733.7
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
16655.6
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
16510.1
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
16139.9
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
16071.7
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
16058.8
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
16052.8
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
15710.0
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
15652.2
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
15564.4
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
15534.1
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
15522.9
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
15263.7
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
15250.7
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
15188.6
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
15150.2
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
14976.3
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
14963.1
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
14767.1
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
14487.8
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
14322.1
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
14215.3
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
13814.7
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
13791.5
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
13755.9
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
13725.2
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
13598.0
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
13580.0
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
13565.7
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
13462.8
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
13243.4
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
13168.4
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
13085.1
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
12992.9
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
12941.4
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
12931.5
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
12923.8
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
12916.8
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
12615.9
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
12602.6
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
12550.9
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
12518.3
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
12515.8
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
12396.6
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
12363.4
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
12339.3
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
12266.5
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
12263.4
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
12180.6
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
12083.7
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
12042.3
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
12041.4
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
12009.0
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
11955.7
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
11897.5
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
11850.7
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
11834.3
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
11759.9
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
11714.2
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
11626.7
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
11597.6
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
11582.7
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
11513.1
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
11492.9
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
11236.6
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
11215.2
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
11111.5
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
11005.2
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
10987.9
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
10972.2
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
10949.6
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
10886.1
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
10869.7
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
10826.8
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
10800.9
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
10769.7
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
10733.7
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
10701.4
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
10673.4
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
10563.7
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
10501.4
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
10497.1
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
10392.1
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
10375.9
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
10339.1
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
10314.1
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
10098.4
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
10094.9
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
10080.3
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
9923.9
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
9879.4
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
9793.8
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
9654.3
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
9641.5
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
9605.0
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
9592.9
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
9588.2
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
9555.9
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
9552.9
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
9527.5
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
9518.9
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
9455.6
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
9452.7
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
9450.8
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
9437.4
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
9372.0
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
9324.9
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
9304.3
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
9219.2
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
9200.7
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
9148.6
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
9106.8
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
9073.6
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
9030.2
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
8986.9
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
8950.1
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
8936.0
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
8932.1
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
8926.3
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
8914.4
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
8911.0
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
8869.0
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
8821.5
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
8770.6
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
8702.2
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
8603.2
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
8529.7
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
8412.5
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
8393.2
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
8382.9
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
8331.9
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
8186.5
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
8174.9
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
8047.6
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
7825.8
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
7816.8
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
7814.7
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
7809.5
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
7803.4
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
7786.9
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
7779.9
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
7766.4
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
7764.2
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
7716.6
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
7695.3
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
7553.5
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
7515.6
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
7512.6
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
7500.0
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
7483.3
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
7478.2
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
7465.3
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
7444.3
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
7345.8
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
7315.8
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
7313.6
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
7299.3
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
7286.3
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
7237.4
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
7233.1
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
7154.4
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
7148.2
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
7142.2
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
7080.0
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
7076.0
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
7069.6
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
7043.7
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
7034.1
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
7018.0
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
6960.0
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
6954.4
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
6925.9
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
6909.7
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
6900.5
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
6826.0
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
6802.8
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
6796.3
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
6776.9
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
6756.4
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
6679.1
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
6677.3
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
6676.8
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
6672.7
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
6659.9
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
6650.5
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
6638.9
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
6624.4
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
6541.2
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
6512.7
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
6510.0
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
6484.8
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
6481.7
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
6451.8
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
6406.8
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
6345.9
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
6326.9
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
6323.2
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
6309.9
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
6239.4
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
6169.6
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
6128.8
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
6076.8
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
6061.2
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
6052.0
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
6048.9
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
6031.3
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
6021.2
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
6004.8
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
6002.7
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
5985.4
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
5953.0
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
5862.2
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
5774.1
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
5767.7
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
5746.7
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
5740.5
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
5726.2
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
5714.7
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
5636.1
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
5588.3
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
5575.7
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
5544.7
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
5513.2
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
5485.2
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
5483.6
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
5455.0
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
5453.0
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
5391.2
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
5390.6
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
5367.6
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
5361.5
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
5354.4
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
5339.1
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
5333.0
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
5299.7
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
5280.8
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
5246.8
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
5187.2
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
5185.3
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
5123.1
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
5093.2
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
5083.3
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
5059.8
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
5003.5
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
5002.0
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
4951.1
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
4912.9
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
4855.2
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
4811.0
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
4807.1
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
4806.9
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
4789.0
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
4767.9
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
4758.5
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
4730.4
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
4717.6
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
4643.1
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
4639.1
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
4629.5
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
4627.9
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
4621.6
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
4606.0
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
4602.2
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
4563.3
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
4544.9
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
4493.3
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
4424.4
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
4370.9
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
4357.8
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
4349.2
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
4346.4
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
4329.5
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
4298.8
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
4282.2
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
4207.3
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
4172.5
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
4130.9
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
4091.1
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
3941.8
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
3939.9
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
3882.6
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
3863.6
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
3859.0
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
3824.5
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
3816.0
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
3808.3
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
3791.0
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
3789.2
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
3764.7
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
3734.0
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
3706.7
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
3689.6
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
3684.7
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
3597.8
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
3587.0
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
3552.4
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
3472.6
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
3444.4
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
3434.4
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
3394.0
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
3249.1
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
3222.8
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
3166.1
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
3110.2
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
3078.6
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
3016.8
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
2975.8
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
2934.8
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
2901.9
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
2827.2
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
2789.1
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
2645.1
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
2602.0
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
2515.2
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
2514.6
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
2510.1
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
2393.6
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
2328.2
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
2265.9
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
2163.9
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2126.8
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
1846.8
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
1830.5
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
1570.6
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
1528.3
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
1508.2
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
1471.5
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
1237.9
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
1191.3
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
976.1
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.