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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
17252.9
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
54277.7
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
45742.0
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
45304.2
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
45071.6
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
43749.1
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
41941.9
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
40330.0
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
39815.2
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
38883.5
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
37954.3
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
37322.1
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
37109.9
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
36278.9
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
35903.9
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
35788.4
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
35517.6
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
34476.0
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
34213.7
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
33929.0
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
33600.6
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
32939.1
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
32844.9
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
32544.9
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
32181.7
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
32084.8
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
31658.4
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
31109.7
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
31101.8
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
31092.4
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
31032.2
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
30576.6
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
29692.9
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
29505.7
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
29237.9
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
28721.3
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
28609.1
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
28325.3
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
28215.0
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
28169.1
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
28000.1
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
27813.5
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
27724.7
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
27521.6
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
27484.1
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
27449.4
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
27309.5
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
27194.4
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
27181.1
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
27125.7
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
26982.0
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
26728.0
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
26722.9
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
26673.3
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
26584.4
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
25728.4
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
25678.3
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
25564.6
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
25238.3
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
25081.2
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
24907.8
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
24866.9
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
24737.8
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
24591.0
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
24536.5
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
24383.1
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
24359.0
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
24205.3
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
24153.7
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
24104.1
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
24076.0
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
23877.7
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
23864.0
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
23804.0
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
23672.7
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
23562.0
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
23548.6
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
23463.0
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
23249.3
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
23043.3
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
22990.9
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
22795.7
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
22430.9
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
22376.9
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
22243.8
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
21891.2
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
21869.9
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
21810.7
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
21756.8
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
21659.6
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
21586.1
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
21540.9
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
21477.9
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
21423.6
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
21358.6
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
21323.4
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
21036.7
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
21022.6
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
20763.7
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
20543.8
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
20503.0
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
20496.2
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
20408.3
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
20323.8
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
20178.9
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
20023.6
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
20017.0
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
19966.4
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
19873.4
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
19858.7
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
19719.6
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
19719.3
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
19609.0
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
19481.1
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
19450.3
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
19387.6
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
19349.0
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
19293.1
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
19287.4
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
19250.4
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
19238.8
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
19112.6
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
19078.6
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
19065.8
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
18822.9
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
18584.9
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
18582.6
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
18489.7
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
18481.0
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
18458.8
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
18283.8
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
18268.1
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
18151.7
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
18105.1
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
18078.3
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
18014.4
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
17991.6
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
17971.4
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
17752.4
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
17584.1
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
17580.6
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
17532.6
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
17528.5
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
17510.1
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
17468.2
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
17387.5
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
17382.3
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
17239.3
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
17225.8
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
17141.2
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
17136.0
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
17115.6
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
17107.4
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
17069.5
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
17054.9
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
17013.1
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
16887.8
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
16877.6
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
16583.3
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
16489.5
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
16458.6
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
16377.0
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
16289.0
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
16262.3
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
16157.8
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
16132.7
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
16125.5
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
16113.9
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
16058.7
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
16033.7
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
15958.9
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
15857.0
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
15718.9
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
15701.0
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
15558.5
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
15414.1
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
15407.1
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
15293.4
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
15274.2
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
15232.7
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
15170.5
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
14935.6
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
14934.9
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
14855.8
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
14828.1
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
14807.3
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
14728.5
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
14558.9
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
14536.4
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
14520.8
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
14478.2
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
14447.6
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
14444.2
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
14394.3
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
14288.9
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
14258.7
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
14149.4
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
14135.8
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
14128.1
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
14108.1
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
14053.2
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
14021.2
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
14003.6
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
13919.6
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
13897.1
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
13809.6
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
13802.7
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
13793.6
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
13780.7
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
13693.9
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
13679.5
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
13672.8
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
13564.8
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
13473.8
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
13416.9
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
13384.1
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
13379.0
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
13294.1
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
13253.6
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
13252.4
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
13114.7
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
13111.1
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
13097.5
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
13046.9
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
13041.2
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
13039.6
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
13022.0
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
12891.5
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
12840.3
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
12824.5
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
12795.3
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
12787.9
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
12764.1
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
12759.5
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
12728.0
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
12679.2
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
12659.7
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
12652.5
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
12387.4
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
12330.3
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
12321.1
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
12298.9
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
12243.9
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
12191.6
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
12067.7
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
12065.5
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
12043.9
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
12023.4
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
11798.0
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
11739.2
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
11652.1
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
11648.3
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
11644.0
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
11475.0
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
11294.8
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
11252.8
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
11241.0
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
11236.0
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
11226.6
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
11226.2
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
11218.6
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
11193.0
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
11180.8
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
11179.6
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
11102.1
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
11072.6
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
11043.9
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
10882.9
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
10878.6
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
10696.9
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
10678.2
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
10675.3
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
10665.2
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
10637.6
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
10624.5
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
10567.8
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
10484.2
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
10452.1
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
10421.4
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
10360.4
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
10355.2
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
10354.4
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
10261.6
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
10217.4
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
10190.4
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
10162.3
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
10125.4
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
10063.9
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
10045.7
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
10041.3
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
9943.6
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
9838.0
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
9791.4
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
9777.4
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
9626.6
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
9535.8
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
9534.7
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
9525.4
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
9495.7
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
9440.1
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
9434.2
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
9418.2
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
9393.1
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
9307.4
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
9202.6
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
9153.1
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
9104.9
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
9088.1
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
9084.3
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
8988.2
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
8951.8
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
8791.8
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
8725.1
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
8678.4
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
8588.8
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
8532.0
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
8530.8
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
8517.6
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
8512.9
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
8504.9
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
8475.4
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
8452.8
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
8314.4
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
8039.1
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
7737.7
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
7655.2
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
7559.6
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
7525.2
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
7462.9
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
7433.7
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
7358.9
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
7351.7
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
7314.8
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
7180.4
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
7168.4
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
7137.3
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
6992.1
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
6988.3
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
6783.9
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
6261.0
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
6179.1
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
5914.5
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
5537.0
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
5385.4
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
5295.4
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
5264.4
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
5091.1
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
5065.0
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
4513.9
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
4216.0
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
3963.8
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
3375.9
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
3084.0
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
2988.5
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
1896.9
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.