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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
8522.7
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
86287.9
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
47064.4
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
43956.0
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
41774.6
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
35148.4
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
33596.9
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
30741.1
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
30444.9
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
28862.0
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
28692.0
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
28659.5
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
28590.2
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
28374.0
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
26084.5
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
25005.0
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
24826.7
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
24677.2
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
23790.8
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
22628.1
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
22240.7
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
22197.3
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
21782.0
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
21465.5
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
20784.0
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
20386.8
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
20384.6
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
20249.7
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
19641.8
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
19218.7
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
19156.2
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
18659.8
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
18541.2
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
17263.8
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
17017.2
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
16917.6
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
16503.3
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
16347.4
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
16164.9
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
15910.8
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
15895.8
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
15858.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
15829.6
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
15770.8
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
15242.5
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
15210.5
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
15111.9
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
15055.0
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
14862.4
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
14755.9
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
14755.5
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
14738.9
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
14473.4
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
14453.7
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
14382.6
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
14060.1
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
13981.0
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
13891.5
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
13844.5
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
13512.4
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
13500.7
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
13233.9
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
13203.0
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
12974.3
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
12963.1
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
12792.9
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
12788.1
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
12603.4
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
12536.7
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
12467.9
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
12454.1
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
12401.1
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
12324.8
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
12285.8
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
12209.8
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
12192.9
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
12041.5
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
11892.4
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
11708.5
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
11623.8
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
11470.2
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
11305.8
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
10923.5
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
10909.6
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
10873.1
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
10819.2
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
10656.8
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
10644.3
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
10643.4
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
10614.9
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
10612.8
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
10608.8
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
10499.9
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
10478.4
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
10476.6
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
10437.4
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
10420.6
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
10287.2
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
10268.3
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
10196.7
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
10089.1
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
10058.3
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
10056.6
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
10002.3
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
9995.0
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
9860.0
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
9826.1
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
9773.7
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
9712.1
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
9689.5
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
9500.0
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
9497.9
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
9441.6
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
9438.8
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
9400.0
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
9384.6
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
9372.5
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
9357.4
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
9348.4
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
9344.0
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
9294.4
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
9285.9
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
9279.1
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
9257.0
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
9206.5
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
9194.4
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
9159.9
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
9122.2
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
9097.3
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
9091.4
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
9030.8
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
8991.3
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
8913.0
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
8855.1
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
8770.5
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
8714.8
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
8652.2
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
8633.8
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
8631.5
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
8620.3
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
8603.6
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
8531.2
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
8470.0
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
8449.9
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
8379.8
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
8376.9
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
8357.4
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
8356.7
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
8355.1
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
8350.1
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
8345.0
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
8308.2
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
8234.7
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
8223.4
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
8103.8
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
8085.8
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
8072.4
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
8065.0
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
8041.4
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
8028.2
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
8001.4
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
7978.8
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
7965.2
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
7923.7
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
7915.1
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
7888.2
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
7884.0
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
7853.7
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
7824.3
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
7740.0
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
7690.7
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
7570.0
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
7550.8
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
7526.2
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
7446.7
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
7416.6
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
7338.5
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
7338.0
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
7327.0
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
7257.1
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
7211.1
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
7158.2
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
7078.7
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
7075.2
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
7070.8
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
7070.0
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
7060.8
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
7024.3
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
7020.2
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
6953.2
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
6945.8
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
6917.7
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
6901.6
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
6861.6
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
6848.2
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
6843.5
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
6842.5
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
6779.0
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
6760.3
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
6701.1
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
6701.0
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
6644.4
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
6613.8
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
6594.2
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
6559.7
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
6502.0
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
6484.8
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
6441.6
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
6410.7
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
6399.7
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
6399.1
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
6367.1
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
6362.6
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
6358.6
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
6338.9
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
6310.0
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
6307.8
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
6279.0
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
6274.3
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
6259.6
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
6249.5
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
6245.0
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
6227.3
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
6170.9
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
6152.8
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
6150.1
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
6090.1
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
6058.6
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
6003.5
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
6002.4
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
5980.7
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
5867.7
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
5852.9
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
5849.3
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
5829.4
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
5779.7
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
5752.7
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
5751.4
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
5633.1
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
5594.0
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
5583.1
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
5552.1
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
5503.2
TCGA-HQ-A2OE-01A
male, alive, 1174 days
5501.0
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
5497.7
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
5490.6
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
5437.3
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
5394.2
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
5382.2
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
5335.5
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
5329.9
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
5267.8
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
5252.9
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
5217.0
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
5198.9
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
5072.1
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
5060.7
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
5041.2
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
5033.6
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
5021.9
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
5021.1
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
5010.6
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
4998.8
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
4983.1
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
4969.4
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
4967.8
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
4895.1
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
4863.9
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
4840.7
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
4831.9
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
4821.2
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
4802.9
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
4753.9
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
4714.5
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
4712.7
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
4702.3
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
4674.7
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
4627.1
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
4591.0
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
4548.9
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
4529.4
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
4525.3
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
4525.1
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
4490.2
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
4453.4
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
4444.2
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
4425.7
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
4415.3
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
4374.0
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
4368.3
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
4341.7
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
4297.6
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
4290.1
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
4283.6
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
4279.3
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
4251.6
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
4251.5
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
4248.9
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
4247.0
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
4236.9
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
4158.2
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
4117.0
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
4075.4
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
4067.6
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
4061.2
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
4018.0
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
3994.0
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
3992.2
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
3960.0
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
3920.9
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
3908.1
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
3901.7
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
3898.4
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
3887.0
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
3884.5
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
3882.8
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
3857.7
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
3840.6
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
3832.4
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
3820.2
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
3768.7
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
3766.2
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
3730.3
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
3690.3
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
3685.3
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
3677.6
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
3591.4
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
3580.5
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
3539.7
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
3537.0
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
3461.0
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
3429.3
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
3382.4
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
3364.1
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
3286.5
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
3274.9
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
3242.2
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
3187.6
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
3172.7
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
3166.5
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
3166.1
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
3163.8
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
3156.3
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
3141.0
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
3140.8
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
3136.4
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
3118.8
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
3103.1
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
3089.5
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
3087.6
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
3061.6
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
3060.4
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
3023.5
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
3020.4
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
3016.0
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
2982.7
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
2980.4
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
2974.5
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
2945.8
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
2938.7
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
2935.8
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
2928.9
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
2926.8
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
2910.6
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
2875.7
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
2870.6
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
2827.6
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
2803.4
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
2784.6
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
2705.0
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
2697.0
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
2693.7
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
2676.4
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
2667.7
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
2627.6
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
2557.2
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
2513.0
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
2445.6
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
2441.5
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
2389.1
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
2384.8
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
2371.0
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
2320.7
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
2319.1
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
2250.4
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
2248.0
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
2217.8
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
2211.1
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
2092.9
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
2048.0
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
2043.9
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1989.6
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
1956.7
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1914.4
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
1907.6
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
1869.8
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
1693.2
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
1675.0
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1554.2
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1553.9
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
1354.0
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
1297.6
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
1142.7
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
1094.1
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
984.3
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
964.3
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
642.9
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.