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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
6415.5
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
20756.6
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
18816.3
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
18012.1
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
17920.3
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
17386.9
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
17374.3
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
17332.8
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
17043.7
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
16389.0
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
16063.2
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
15363.5
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
15263.0
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
14387.3
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
14148.6
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
13988.5
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
13981.6
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
13932.8
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
13881.0
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
13471.5
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
13136.7
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
12998.6
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
12805.5
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
12633.2
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
12521.7
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
12520.0
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
12445.0
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
12194.3
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
12040.9
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
11933.8
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
11897.0
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
11792.5
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
11613.8
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
11493.5
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
11305.5
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
11232.4
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
11200.7
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
11097.2
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
11075.4
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
11000.4
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
10970.4
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
10908.1
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
10858.3
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
10745.3
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
10710.2
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
10708.7
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
10686.1
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
10673.1
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
10609.7
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
10575.4
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
10552.5
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
10432.2
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
10402.8
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
10211.0
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
10086.0
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
10038.2
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
10019.9
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
9956.0
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
9778.4
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
9728.8
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
9705.9
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
9632.8
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
9578.1
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
9568.2
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
9533.1
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
9529.7
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
9482.7
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
9445.1
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
9444.1
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
9400.3
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
9345.9
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
9195.3
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
9128.5
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
8979.1
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
8969.3
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
8933.9
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
8879.5
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
8834.7
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
8822.6
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
8746.0
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
8649.2
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
8619.8
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
8614.3
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
8546.6
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
8511.2
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
8441.5
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
8330.4
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
8293.3
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
8292.9
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
8208.1
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
8065.6
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
8033.4
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
7943.5
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
7871.4
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
7840.5
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
7828.9
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
7804.4
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
7788.6
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
7750.9
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
7688.2
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
7683.7
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
7680.2
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
7671.4
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
7647.2
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
7644.6
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
7593.5
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
7528.9
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
7500.0
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
7474.8
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
7394.3
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
7368.7
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
7303.9
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
7247.9
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
7193.0
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
7161.7
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
7083.8
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
7035.6
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
7029.6
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
7009.5
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
6997.1
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
6983.9
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
6953.9
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
6945.6
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
6940.2
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
6895.8
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
6872.7
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
6866.9
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
6829.5
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
6792.6
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
6775.4
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
6759.1
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
6720.9
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
6719.1
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
6671.1
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
6656.1
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
6557.5
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
6554.7
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
6547.4
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
6513.5
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
6504.6
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
6502.5
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
6502.2
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
6491.9
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
6472.7
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
6455.8
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
6443.3
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
6436.5
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
6418.5
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
6400.4
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
6398.5
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
6292.7
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
6287.6
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
6278.2
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
6269.7
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
6244.2
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
6224.4
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
6220.2
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
6208.5
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
6199.7
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
6177.9
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
6175.8
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
6173.3
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
6129.8
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
6089.6
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
6079.7
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
6054.9
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
6028.4
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
6019.6
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
5972.3
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
5964.4
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
5959.2
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
5953.4
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
5939.0
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
5926.6
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
5897.9
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
5880.3
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
5848.8
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
5800.5
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
5797.9
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
5791.2
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
5777.2
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
5724.7
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
5720.2
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
5707.2
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
5650.7
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
5629.8
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
5624.2
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
5579.1
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
5574.4
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
5560.6
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
5529.5
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
5499.1
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
5494.0
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
5461.4
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
5449.6
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
5436.2
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
5428.5
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
5421.4
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
5421.2
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
5406.4
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
5395.7
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
5372.4
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
5362.7
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
5360.3
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
5334.4
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
5320.0
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
5319.3
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
5317.8
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
5223.6
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
5199.4
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
5165.5
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
5146.1
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
5140.6
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
5125.5
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
5034.0
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
5006.6
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
4983.9
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
4966.4
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
4895.9
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
4860.1
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
4845.3
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
4845.2
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
4801.1
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
4787.7
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
4773.0
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
4770.9
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
4767.2
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
4762.7
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
4744.0
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
4735.1
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
4720.5
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
4622.5
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
4591.6
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
4566.8
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
4538.5
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
4529.0
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
4458.0
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
4442.8
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
4371.7
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
4348.5
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
4319.1
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
4281.0
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
4218.9
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
4198.7
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
4183.4
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
4135.8
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
4075.5
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
4067.1
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
4039.2
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
4029.7
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
4025.4
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
3938.9
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
3931.1
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
3877.9
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
3827.3
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
3725.5
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
3704.1
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
3699.0
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
3690.8
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
3663.0
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
3617.9
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
3617.4
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
3608.0
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
3594.0
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
3574.7
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
3570.5
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
3515.0
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
3509.8
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
3485.8
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
3481.4
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
3480.0
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
3464.8
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
3441.4
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
3431.4
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
3408.4
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
3392.4
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
3379.2
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
3333.2
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
3330.4
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
3305.0
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
3290.4
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
3248.1
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
3239.0
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
3212.3
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
3200.2
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
3193.1
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
3141.5
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
3119.6
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
3115.9
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
3081.1
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
3060.3
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
3034.2
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
3022.0
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
3009.2
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
2998.5
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
2986.9
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
2972.9
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
2943.4
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
2935.7
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
2925.8
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
2908.4
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
2905.1
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
2904.5
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
2898.6
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
2889.7
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2869.4
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
2806.1
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
2780.1
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
2756.5
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
2729.2
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
2717.2
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
2692.9
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
2691.7
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
2690.0
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
2683.2
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
2677.7
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
2663.7
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
2658.9
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
2650.0
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
2639.2
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
2614.4
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
2579.6
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
2577.9
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
2571.0
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
2502.7
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
2474.9
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
2464.4
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
2454.9
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
2318.0
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
2282.5
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
2259.6
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
2191.2
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
2154.5
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
2126.6
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
2125.4
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
2081.4
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
2041.2
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
2018.7
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
1957.0
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
1889.1
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
1871.0
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
1868.9
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
1862.8
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
1784.4
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
1777.4
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
1683.2
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
1566.9
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
1559.6
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
1441.7
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
1389.8
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
1354.1
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
1267.2
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
1123.8
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
690.3
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
307.7
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.