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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
4417.9
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
71354.1
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
31173.0
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
23815.2
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
22812.7
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
22224.0
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
20002.9
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
18649.0
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
17145.1
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
17037.8
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
16717.5
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
14637.0
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
14395.6
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
14290.2
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
14276.4
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
13649.5
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
13492.4
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
13476.2
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
13160.0
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
12901.9
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
12670.3
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
12653.7
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
12640.7
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
12308.7
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
11860.6
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
11536.8
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
11242.1
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
11146.3
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
11138.0
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
10911.5
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
10650.3
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
10620.6
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
10155.7
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
10153.2
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
9847.9
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
9804.6
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
9733.1
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
9596.3
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
9204.2
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
8958.2
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
8811.4
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
8716.2
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
8459.9
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
8446.3
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
8322.1
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
8261.4
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
8257.5
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
8177.5
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
8164.8
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
8134.1
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
8066.7
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
7970.9
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
7795.3
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
7679.3
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
7566.2
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
7521.4
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
7451.9
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
7420.1
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
7364.1
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
7346.4
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
7338.0
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
7298.8
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
7284.5
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
7256.9
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
7107.1
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
7007.2
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
6964.3
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
6883.8
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
6843.1
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
6796.7
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
6750.8
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
6748.3
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
6716.3
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
6698.6
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
6667.9
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
6371.9
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
6365.3
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
6332.7
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
6315.6
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
6314.9
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
6264.2
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
6237.4
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
6190.9
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
6155.2
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
6088.9
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
6031.2
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
5980.9
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
5947.1
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
5888.4
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
5856.0
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
5844.5
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
5834.8
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
5831.6
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
5739.7
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
5712.0
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
5697.2
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
5648.0
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
5573.2
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
5565.1
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
5492.2
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
5466.9
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
5449.6
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
5446.0
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
5403.9
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
5403.2
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
5387.0
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
5354.6
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
5261.5
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
5238.8
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
5178.3
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
5163.3
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
5149.7
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
5143.6
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
5103.2
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
5092.5
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
5008.9
TCGA-HQ-A2OE-01A
male, alive, 1174 days
4968.3
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
4946.4
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
4930.8
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
4896.5
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
4794.3
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
4721.1
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
4717.2
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
4683.2
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
4678.2
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
4673.5
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
4652.6
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
4639.9
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
4594.6
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
4516.6
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
4498.3
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
4477.9
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
4458.2
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
4432.1
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
4395.3
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
4365.2
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
4346.2
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
4315.6
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
4311.3
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
4277.8
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
4242.3
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
4211.1
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
4208.8
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
4188.4
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
4168.5
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
4145.3
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
4124.0
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
4105.6
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
4091.1
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
4085.8
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
4028.1
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
4013.3
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
3978.1
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
3954.9
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
3949.1
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
3925.8
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
3925.5
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
3911.9
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
3911.7
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
3910.1
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
3902.5
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
3839.8
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
3833.0
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
3813.2
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
3812.3
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
3782.0
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
3725.4
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
3681.0
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
3678.7
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
3645.8
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
3645.2
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
3635.6
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
3604.7
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
3590.7
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
3577.0
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
3563.4
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
3511.2
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
3486.0
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
3468.6
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
3466.2
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
3466.0
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
3465.0
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
3462.3
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
3458.8
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
3447.4
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
3441.8
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
3406.3
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
3325.6
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
3323.6
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
3307.6
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
3299.2
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
3298.6
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
3280.6
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
3245.2
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
3235.6
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
3230.0
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
3210.7
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
3204.7
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
3194.9
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
3181.1
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
3178.1
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
3149.3
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
3128.4
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
3115.3
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
3103.6
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
3102.2
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
2986.5
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
2979.7
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
2953.8
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
2929.8
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
2890.0
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
2872.1
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
2871.5
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
2858.3
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
2856.8
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
2855.8
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
2835.1
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
2805.3
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
2789.7
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
2781.9
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
2772.3
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
2769.8
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
2728.1
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
2697.5
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
2689.6
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
2684.7
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
2673.3
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
2672.7
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
2662.4
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
2659.9
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
2613.8
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
2593.8
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
2568.4
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
2565.0
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
2562.4
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
2544.3
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
2532.4
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
2515.3
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
2501.5
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
2489.1
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
2488.8
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
2478.0
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
2432.7
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
2404.7
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
2398.6
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
2388.3
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
2372.7
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
2369.5
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
2368.9
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
2368.0
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
2365.7
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
2355.7
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
2354.4
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
2321.4
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
2311.9
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
2296.6
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
2277.2
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
2250.1
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
2233.3
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
2213.0
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
2203.8
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
2177.4
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
2165.0
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
2159.5
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
2156.4
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
2149.4
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
2147.2
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
2124.1
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
2116.9
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
2098.6
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
2098.5
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
2089.4
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
2085.0
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
2065.8
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
2046.7
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
2014.5
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
1992.3
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1980.3
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
1978.1
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
1977.8
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
1976.5
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
1952.7
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
1949.3
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
1929.9
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
1926.8
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
1919.8
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
1919.4
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
1915.7
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
1906.1
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
1893.0
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
1889.1
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
1886.5
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
1882.7
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
1874.1
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1873.4
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
1871.2
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
1843.6
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
1843.2
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
1840.4
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
1834.8
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
1764.8
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
1725.6
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
1719.0
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
1703.3
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
1689.1
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
1674.4
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
1674.1
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1671.6
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
1659.6
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
1656.5
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
1653.5
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
1628.0
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
1621.2
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1610.9
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
1595.1
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
1593.8
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
1588.0
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
1584.7
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
1575.9
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
1573.9
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
1570.7
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
1566.7
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
1560.9
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
1538.3
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
1536.3
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
1530.6
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
1519.9
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
1503.9
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
1491.3
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1487.7
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
1480.0
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
1469.7
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
1443.9
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
1426.6
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
1395.2
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
1356.4
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
1351.6
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
1337.6
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
1317.8
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
1295.9
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
1293.1
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
1276.2
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
1261.5
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
1259.5
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
1258.6
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
1250.0
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
1236.7
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
1229.2
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
1218.1
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
1209.5
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
1205.4
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
1202.0
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
1196.4
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
1188.6
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
1188.1
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
1182.0
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
1181.5
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
1174.0
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
1170.2
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
1165.5
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
1163.6
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
1144.8
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1140.6
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
1128.1
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
1123.7
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
1082.2
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
1081.5
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
1058.9
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
1043.4
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
1022.6
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
1021.8
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
1020.0
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1019.5
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1010.3
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
995.8
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
975.1
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
974.4
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
958.3
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
950.1
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
940.4
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
936.8
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
910.4
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
866.7
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
863.6
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
818.3
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
764.9
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
750.2
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
738.2
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
733.7
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
698.2
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
697.2
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
678.0
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
670.0
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
660.5
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
632.8
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
626.5
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
585.3
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
583.5
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
560.5
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
512.1
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
494.2
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
473.7
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
445.9
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
386.7
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
347.7
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
303.7
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
291.7
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.