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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
7564.1
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
26236.9
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
23392.1
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
20298.5
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
20293.9
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
20078.1
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
19864.8
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
19818.9
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
19468.2
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
18967.7
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
18952.0
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
18345.1
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
17045.9
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
17025.8
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
16705.4
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
16700.8
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
16657.0
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
16601.3
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
16333.6
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
16316.3
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
16198.7
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
15346.8
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
15231.7
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
15203.9
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
14601.7
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
14327.2
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
14327.0
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
14191.8
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
13866.1
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
13636.3
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
13420.8
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
13185.0
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
13163.9
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
13163.2
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
12953.7
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
12901.5
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
12791.8
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
12552.3
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
12541.4
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
12536.3
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
12501.3
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
12152.9
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
12106.6
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
12079.5
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
12043.4
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
12026.2
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
11895.2
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
11868.1
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
11827.0
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
11716.8
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
11688.5
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
11640.0
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
11614.0
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
11524.4
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
11412.4
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
11345.1
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
11186.9
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
11155.9
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
11128.6
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
10979.6
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
10950.2
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
10869.2
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
10580.6
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
10580.2
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
10553.4
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
10473.9
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
10473.9
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
10467.3
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
10407.9
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
10279.4
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
10242.0
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
10147.0
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
10134.0
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
10095.5
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
10088.1
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
10048.7
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
9957.4
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
9934.1
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
9861.6
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
9818.9
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
9785.5
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
9781.1
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
9684.1
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
9669.4
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
9531.7
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
9479.2
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
9408.9
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
9399.1
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
9394.8
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
9366.0
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
9356.1
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
9214.8
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
9188.4
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
9162.9
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
9146.3
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
9138.1
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
9085.4
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
8921.0
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
8852.0
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
8848.5
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
8809.0
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
8797.4
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
8743.4
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
8716.1
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
8651.5
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
8650.6
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
8609.4
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
8511.0
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
8485.3
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
8475.1
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
8435.3
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
8365.9
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
8343.4
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
8301.9
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
8281.6
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
8222.3
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
8140.4
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
8085.5
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
8046.6
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
8007.7
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
8005.8
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
8001.3
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
7884.2
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
7856.1
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
7838.9
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
7831.7
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
7821.2
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
7811.5
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
7740.0
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
7643.4
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
7612.5
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
7610.3
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
7601.4
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
7588.9
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
7578.7
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
7577.0
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
7570.5
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
7542.2
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
7537.6
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
7527.5
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
7510.7
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
7461.8
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
7461.5
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
7448.5
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
7436.6
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
7418.6
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
7365.4
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
7347.5
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
7303.3
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
7289.3
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
7283.8
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
7238.1
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
7212.5
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
7211.1
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
7190.7
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
7184.8
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
7175.2
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
7093.1
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
7080.7
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
7077.8
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
7067.8
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
7064.6
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
7052.6
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
7001.5
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
6993.7
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
6954.5
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
6940.9
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
6898.5
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
6881.5
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
6853.8
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
6813.7
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
6801.5
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
6789.1
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
6787.9
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
6786.6
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
6779.8
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
6772.7
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
6762.6
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
6756.2
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
6740.7
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
6731.2
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
6715.1
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
6702.9
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
6670.9
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
6669.8
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
6668.5
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
6658.6
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
6646.3
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
6643.5
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
6637.3
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
6621.7
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
6621.5
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
6586.9
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
6567.3
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
6526.6
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
6495.4
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
6487.7
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
6482.2
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
6480.8
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
6407.6
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
6397.2
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
6380.1
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
6375.4
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
6347.0
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
6323.5
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
6284.3
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
6233.0
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
6182.8
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
6141.7
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
6093.7
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
6089.8
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
6040.3
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
6037.5
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
6025.3
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
6019.5
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
5937.0
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
5908.1
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
5855.8
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
5834.4
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
5797.6
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
5763.6
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
5708.0
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
5701.3
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
5656.9
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
5640.1
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
5634.4
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
5600.5
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
5594.4
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
5567.7
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
5554.3
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
5554.0
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
5542.2
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
5496.9
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
5461.2
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
5443.8
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
5424.2
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
5341.4
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
5334.7
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
5321.2
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
5315.0
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
5305.2
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
5281.1
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
5263.6
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
5184.9
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
5154.7
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
5148.5
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
5147.1
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
5128.8
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
5106.1
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
5065.8
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
5059.8
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
5052.9
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
5017.9
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
4992.9
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
4959.7
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
4941.6
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
4937.0
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
4927.7
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
4903.2
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
4896.9
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
4890.7
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
4756.5
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
4734.3
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
4719.5
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
4717.3
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
4686.1
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
4666.5
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
4649.8
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
4639.9
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
4588.0
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
4550.2
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
4477.0
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
4437.3
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
4421.0
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
4411.0
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
4395.0
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
4392.6
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
4370.2
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
4360.3
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
4345.8
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
4329.7
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
4302.3
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
4293.4
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
4274.8
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
4268.1
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
4244.8
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
4228.4
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
4224.9
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
4170.7
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
4137.3
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
4119.4
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
4060.6
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
4047.3
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
4046.0
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
4030.4
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
4023.6
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
3991.9
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
3984.6
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
3979.1
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
3944.1
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
3878.3
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
3858.3
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
3831.6
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
3808.1
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
3753.4
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
3704.5
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
3639.8
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
3629.6
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
3622.6
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
3614.1
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
3557.7
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
3554.2
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
3530.3
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
3521.0
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
3485.7
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
3441.4
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
3435.9
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
3412.4
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
3383.8
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
3375.5
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
3326.8
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
3324.6
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
3304.2
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
3299.2
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
3282.7
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
3280.7
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
3261.2
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
3177.3
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
3159.6
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
3140.8
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
3110.2
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
3083.7
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
3074.4
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
3061.7
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
3058.5
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
2976.1
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
2970.9
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
2947.0
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
2920.7
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
2899.8
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
2873.0
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
2865.5
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
2811.1
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
2707.7
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
2643.2
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
2592.6
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
2584.3
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
2370.6
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
2315.8
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
2285.0
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
2280.1
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
2124.7
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
2100.8
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
1547.8
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
865.5
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.