Expression of MT-ATP6 in testis cancer - The Human Protein Atlas

TESTIS CANCER - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-ATP6 is not prognostic in testis cancer

Stage:

Survival analysis

Current cut offⁱ:
Best expression cut offⁱ: 3966.31
Median expressionⁱ: N/A
Median follow up timeⁱ: N/A
P scoreⁱ N/A
5-year survival highⁱ N/A
5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average FPKM

4768.0

Number of samples

134

Samples

Sample	Description	FPKM
TCGA-XE-AAOL-01A	38 years, male, black or african american, stage:i, alive, 13 days	39938.1
TCGA-ZM-AA05-01A	36 years, male, white, stage:iic, alive, 1126 days	36597.5
TCGA-ZM-AA0E-01A	39 years, male, white, stage:ia, alive, 811 days	23783.7
TCGA-ZM-AA0F-01A	35 years, male, white, stage:ia, alive, 681 days	23744.8
TCGA-ZM-AA06-01A	45 years, male, white, stage:ib, alive, 1498 days	22028.7
TCGA-ZM-AA0N-01A	44 years, male, white, stage:ib, alive, 634 days	20482.9
TCGA-ZM-AA0H-01A	50 years, male, white, stage:is, alive, 1736 days	19635.4
TCGA-ZM-AA0B-01A	32 years, male, white, stage:ia, alive, 838 days	16875.5
TCGA-XE-AAO6-01A	47 years, male, white, stage:ia, alive, 240 days	11781.3
TCGA-2G-AAGG-01A	20 years, male, white, stage:iiic, alive, 2611 days	11031.3
TCGA-XE-AAO4-01A	40 years, male, white, stage:ia, alive, 367 days	9967.7
TCGA-ZM-AA0D-01A	34 years, male, white, stage:ia, alive, 848 days	9171.4
TCGA-2G-AAKD-01A	18 years, male, white, stage:iii, alive, 6340 days	8298.6
TCGA-2G-AAGV-01A	23 years, male, white, alive, 4527 days	6314.4
TCGA-YU-A90S-01A	26 years, male, white, stage:ia, alive, 971 days	6210.0
TCGA-4K-AAAL-01A	31 years, male, white, stage:is, alive, 483 days	5985.2
TCGA-2G-AAGF-01A	28 years, male, white, stage:is, alive, 2734 days	5917.0
TCGA-VF-A8A9-01A	31 years, male, white, stage:ia, alive, 1119 days	5860.2
TCGA-2G-AAH0-01A	30 years, male, white, stage:is, alive, 5477 days	5758.9
TCGA-2G-AAFL-01A	35 years, male, white, stage:ib, alive, 750 days	5668.8
TCGA-2G-AAG6-01A	24 years, male, white, stage:is, alive, 2231 days	5601.2
TCGA-2G-AAFM-01A	31 years, male, white, stage:iia, alive, 503 days	5579.1
TCGA-WZ-A8D5-01A	38 years, male, white, alive, 774 days	5520.1
TCGA-2G-AAGA-01A	38 years, male, white, stage:iia, alive, 2439 days	5518.1
TCGA-VF-A8AE-01A	39 years, male, white, stage:ia, alive, 727 days	5175.7
TCGA-2G-AAL7-01A	32 years, male, white, stage:is, alive, 3991 days	5111.2
TCGA-2G-AAG0-01A	23 years, male, white, stage:is, alive, 1529 days	5078.6
TCGA-2G-AAKL-01A	26 years, male, white, stage:ii, alive, 7023 days	4979.4
TCGA-VF-A8AD-01A	36 years, male, white, stage:ib, alive, 1006 days	4939.2
TCGA-2G-AAFE-01A	37 years, male, white, stage:iia, alive, 4702 days	4822.5
TCGA-YU-A90Y-01A	23 years, male, black or african american, stage:iiic, dead, 17 days	4785.8
TCGA-S6-A8JX-01A	27 years, male, white, stage:ib, alive, 552 days	4669.1
TCGA-2G-AAFY-01A	24 years, male, white, stage:iia, alive, 1099 days	4642.8
TCGA-W4-A7U4-01A	23 years, male, white, alive, 738 days	4621.5
TCGA-2G-AAKM-01A	14 years, male, white, stage:ii, dead, 6972 days	4604.3
TCGA-WZ-A7V4-01A	28 years, male, white, stage:i, alive, 894 days	4579.1
TCGA-XE-AAOD-01A	39 years, male, white, stage:ib, alive, 2058 days	4500.1
TCGA-2G-AAFH-01A	38 years, male, white, stage:iib, alive, 1375 days	4493.3
TCGA-2G-AAGP-01A	33 years, male, white, stage:iia, alive, 4018 days	4380.0
TCGA-2G-AAGW-01A	38 years, male, white, stage:is, alive, 4899 days	4353.9
TCGA-2G-AAFN-01A	26 years, male, white, stage:iiib, alive, 773 days	4272.9
TCGA-2G-AAGE-01A	21 years, male, white, stage:is, alive, 2478 days	4146.1
TCGA-2G-AAF8-01A	33 years, male, white, stage:ia, alive, 3911 days	4138.8
TCGA-2G-AAG9-01A	25 years, male, white, stage:iiib, alive, 2234 days	4058.2
TCGA-XE-AAOJ-01A	24 years, male, white, stage:is, alive, 1550 days	4010.2
TCGA-XE-AAOB-01A	27 years, male, white, stage:is, dead, 513 days	3967.8
TCGA-2G-AAG3-01A	53 years, male, white, stage:is, alive, 1593 days	3964.8
TCGA-XE-AAOC-01A	31 years, male, white, stage:ia, alive, 270 days	3964.8
TCGA-XY-A89B-01A	35 years, male, white, stage:ia, alive, 471 days	3919.6
TCGA-2G-AAG8-01A	21 years, male, white, stage:ib, alive, 2289 days	3845.7
TCGA-2G-AAFJ-01A	23 years, male, asian, alive, 792 days	3806.8
TCGA-4K-AA1I-01A	26 years, male, white, stage:ia, alive, 3 days	3768.7
TCGA-VF-A8A8-01A	18 years, male, white, stage:ia, alive, 1131 days	3659.4
TCGA-2G-AAKG-01A	22 years, male, white, stage:i, alive, 6598 days	3646.6
TCGA-2G-AAG5-01A	36 years, male, white, stage:is, alive, 2299 days	3600.3
TCGA-YU-A94I-01A	66 years, male, stage:ia, alive, 536 days	3583.3
TCGA-2G-AAGZ-01A	27 years, male, white, stage:iiia, alive, 5233 days	3572.8
TCGA-XE-A8H4-01A	23 years, male, white, stage:ia, alive, 559 days	3557.7
TCGA-WZ-A7V3-01A	20 years, male, white, stage:i, alive, 753 days	3523.6
TCGA-VF-A8AB-01A	31 years, male, black or african american, stage:ia, alive, 760 days	3429.8
TCGA-2G-AAKH-01A	19 years, male, white, stage:ii, alive, 6862 days	3382.9
TCGA-2G-AAFO-01A	33 years, male, white, stage:iia, alive, 685 days	3376.3
TCGA-YU-A90W-01A	45 years, male, white, stage:ia, alive, 1113 days	3369.9
TCGA-2G-AAGM-01A	51 years, male, white, stage:is, alive, 3891 days	3337.3
TCGA-2G-AALP-01A	43 years, male, white, stage:iiib, alive, 2645 days	3223.6
TCGA-2G-AAGO-01A	41 years, male, white, stage:is, alive, 4026 days	3193.7
TCGA-X3-A8G4-01A	33 years, male, white, stage:is, alive, 856 days	3168.5
TCGA-2G-AAG7-01A	33 years, male, white, stage:is, alive, 2475 days	3125.1
TCGA-XY-A8S2-01A	67 years, male, white, stage:i, alive, 672 days	3112.6
TCGA-2G-AAGY-01A	28 years, male, white, stage:is, alive, 5329 days	3110.7
TCGA-YU-AA4L-01A	27 years, male, black or african american, stage:iiic, alive, 1573 days	3023.4
TCGA-2G-AAGS-01A	39 years, male, white, stage:iiib, alive, 4816 days	2999.6
TCGA-4K-AA1H-01A	26 years, male, white, stage:ia, alive, 518 days	2972.3
TCGA-XE-A8H1-01A	24 years, male, white, stage:is, alive, 209 days	2908.8
TCGA-SN-A84W-01A	30 years, male, white, stage:is, alive, 293 days	2901.6
TCGA-YU-A90Q-01A	21 years, male, stage:ib, alive, 1964 days	2884.0
TCGA-2G-AAH2-01A	20 years, male, white, stage:is, alive, 6060 days	2880.4
TCGA-YU-A912-01A	34 years, male, black or african american, stage:iiic, alive, 866 days	2860.8
TCGA-YU-A90P-01A	25 years, male, white, stage:ia, alive, 2069 days	2824.5
TCGA-2G-AAFV-01A	31 years, male, white, stage:is, alive, 1389 days	2816.2
TCGA-YU-AA61-01A	29 years, male, white, stage:is, alive, 864 days	2781.5
TCGA-VF-A8AA-01A	51 years, male, white, stage:i, alive, 1146 days	2781.0
TCGA-2G-AAGN-01A	41 years, male, white, stage:iiib, alive, 3656 days	2726.3
TCGA-2X-A9D5-01A	49 years, male, white, stage:i, alive, 435 days	2620.3
TCGA-XE-AANR-01A	24 years, male, white, stage:i, alive, 14 days	2600.7
TCGA-2G-AAGI-01A	33 years, male, white, stage:is, alive, 3137 days	2569.8
TCGA-XE-AAOF-01A	50 years, male, asian, stage:ia, alive, 1268 days	2554.7
TCGA-2G-AAF4-01A	30 years, male, white, stage:i, alive, 2315 days	2524.1
TCGA-2G-AAFZ-01A	32 years, male, white, stage:iii, alive, 1353 days	2497.8
TCGA-2X-A9D6-01A	42 years, male, white, stage:i, alive, 607 days	2465.3
TCGA-SN-A6IS-01A	26 years, male, white, stage:is, alive, 496 days	2447.4
TCGA-2G-AAGC-01A	28 years, male, white, stage:is, alive, 2585 days	2442.3
TCGA-S6-A8JW-01A	37 years, male, white, stage:is, alive, 698 days	2430.3
TCGA-2G-AAGJ-01A	28 years, male, black or african american, stage:ia, alive, 2938 days	2412.5
TCGA-2G-AAH4-01A	34 years, male, white, stage:ii, alive, 6210 days	2406.8
TCGA-XE-AANJ-01A	39 years, male, white, stage:is, alive, 2007 days	2402.8
TCGA-XE-AANV-01A	52 years, male, stage:ib, alive, 1701 days	2382.3
TCGA-XE-A9SE-01A	35 years, male, white, stage:ia, alive, 708 days	2347.6
TCGA-XE-AANI-01A	37 years, male, white, stage:is, alive, 1041 days	2342.6
TCGA-2G-AAFI-01A	41 years, male, white, stage:ib, alive, 675 days	2287.0
TCGA-2G-AAHN-01A	32 years, male, white, stage:i, alive, 6445 days	2270.5
TCGA-2G-AAGX-01A	22 years, male, white, stage:ia, alive, 5514 days	2247.6
TCGA-2G-AAH8-01A	45 years, male, white, stage:iiic, alive, 2248 days	2239.0
TCGA-XE-A8H5-01A	29 years, male, stage:is, alive, 1217 days	2204.7
TCGA-2G-AAHG-01A	25 years, male, white, stage:i, alive, 1819 days	2150.4
TCGA-WZ-A7V5-01A	27 years, male, white, stage:i, alive, 1061 days	2149.2
TCGA-2G-AAFG-01A	30 years, male, white, stage:is, alive, 6183 days	2144.7
TCGA-XY-A8S3-01B	24 years, male, white, stage:is, alive, 843 days	2137.3
TCGA-W4-A7U3-01A	26 years, male, white, alive, 149 days	2125.9
TCGA-SN-A84Y-01A	18 years, male, white, stage:is, alive, 524 days	2118.1
TCGA-2G-AAEX-01A	38 years, male, white, stage:is, alive, 1259 days	2076.1
TCGA-S6-A8JY-01A	27 years, male, white, stage:is, alive, 278 days	2056.5
TCGA-YU-A94D-01A	28 years, male, stage:iiib, alive, 2167 days	2013.8
TCGA-2G-AAHA-01A	48 years, male, white, stage:ib, alive, 3349 days	1989.4
TCGA-2G-AAGT-01A	30 years, male, white, stage:is, alive, 4406 days	1917.5
TCGA-2G-AAHC-01A	33 years, male, white, stage:is, alive, 5539 days	1861.2
TCGA-XY-A9T9-01A	37 years, male, white, stage:is, alive, 281 days	1791.8
TCGA-2G-AAH3-01A	20 years, male, white, stage:i, alive, 1822 days	1757.6
TCGA-SN-A84X-01A	21 years, male, white, stage:is, alive, 312 days	1703.3
TCGA-2G-AAHL-01A	26 years, male, white, stage:i, alive, 7081 days	1681.9
TCGA-2G-AAHT-01A	32 years, male, white, stage:is, alive, 542 days	1678.6
TCGA-SO-A8JP-01A	29 years, male, white, stage:i, alive, 540 days	1623.3
TCGA-2G-AAGK-01A	20 years, male, white, stage:is, alive, 3621 days	1552.8
TCGA-VF-A8AC-01A	29 years, male, white, stage:ia, alive, 1083 days	1549.5
TCGA-W4-A7U2-01A	26 years, male, white, alive, 1263 days	1401.3
TCGA-XE-AAO3-01A	33 years, male, asian, stage:i, alive, 2857 days	1292.9
TCGA-2G-AAEW-01A	31 years, male, white, stage:is, dead, 618 days	1278.3
TCGA-4K-AA1G-01A	34 years, male, white, stage:is, alive, 436 days	1254.2
TCGA-2G-AAL5-01A	31 years, male, white, stage:i, alive, 7437 days	1230.3
TCGA-SB-A76C-01A	38 years, male, white, alive, 42 days	1157.0
TCGA-SB-A6J6-01A	22 years, male, white, stage:ia, alive, 413 days	1088.2
TCGA-2G-AAF1-01A	28 years, male, asian, stage:is, alive, 1403 days	1009.4
TCGA-2G-AAF6-01A	28 years, male, white, stage:is, alive, 3491 days	784.9
TCGA-2G-AAHP-01A	31 years, male, white, stage:is, alive, 5667 days	436.2
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TESTIS CANCER - Protein expressionⁱ

Pending cancer tissue analysis